FFCP PHASE1:Hg19::chr5:150004188..150004308,+
From FANTOM5_SSTAR
| Short description: | p1@SYNPO |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_SYNPO_5end |
| Coexpression cluster: | C713_skeletal_heart_Renal_aorta_Fibroblast_Smooth_mature |
| Association with transcript: | 0bp_to_ENST00000518872_5end |
| EntrezGene: | SYNPO |
| HGNC: | 30672 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@SYNPO |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesodermal cell | 4.91e-09 | 121 |
| endothelial cell of vascular tree | 1.09e-07 | 24 |
| vascular associated smooth muscle cell | 1.43e-07 | 32 |
| endothelial cell | 7.04e-07 | 36 |
| Ontology term | p-value | n |
|---|---|---|
| anatomical conduit | 1.11e-36 | 240 |
| adult organism | 4.68e-35 | 114 |
| tube | 6.06e-32 | 192 |
| epithelium | 2.11e-26 | 306 |
| cell layer | 4.24e-26 | 309 |
| splanchnic layer of lateral plate mesoderm | 1.40e-20 | 83 |
| epithelial tube | 7.69e-19 | 117 |
| structure with developmental contribution from neural crest | 3.58e-18 | 132 |
| vessel | 8.59e-18 | 68 |
| neural plate | 6.01e-17 | 82 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
