Personal tools

UBERON:0009196

From FANTOM5_SSTAR

Revision as of 18:05, 12 September 2014 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:indifferent external genitalia
Namespace:FANTOM
Xrefs:
links:
EHDAA2:0004021
Subset: organ_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002050(embryonic structure),UBERON:0004176(external genitalia)
part_of:UBERON:0000922(embryo)



Children

disjoint from:UBERON:0005056 (external female genitalia)
part of:UBERON:0004876 (urogenital ridge),UBERON:0005876 (undifferentiated genital tubercle),UBERON:0009117 (indifferent gonad)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009196 (indifferent external genitalia), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.56e-61FFCP PHASE2:Mm9::chr4:62295167..62295182,+#_3fa0948a4ff6e995cf8ead25d44bd7e5p22@Rgs3
5.56e-61FFCP PHASE1:Mm9::chr4:62295167..62295182,+#_3fa0948a4ff6e995cf8ead25d44bd7e5p22@Rgs3
4.35e-59FFCP PHASE2:Mm9::chr7:52741629..52741644,+#_534ae145ebbd389d911a2d8d9737554bp7@Tulp2
4.35e-59FFCP PHASE1:Mm9::chr7:52741629..52741644,+#_534ae145ebbd389d911a2d8d9737554bp7@Tulp2
7.74e-59FFCP PHASE1:Mm9::chr2:148615085..148615142,+#_2e9f294841d18bdbc229f6b64a096f60p1@Cst12
7.74e-59FFCP PHASE2:Mm9::chr2:148615085..148615142,+#_2e9f294841d18bdbc229f6b64a096f60p1@Cst12
4.05e-58FFCP PHASE2:Hg19::chr8:38008450..38008459,-#_3af4f5edab0fc0eb91578aa1cafc5aa9p4@STAR
4.05e-58FFCP PHASE1:Hg19::chr8:38008450..38008459,-#_3af4f5edab0fc0eb91578aa1cafc5aa9p4@STAR
7.96e-58FFCP PHASE1:Mm9::chr7:109015811..109015852,-#_74ce7a54efd0f32e1d2f98b9ef579f4fp6@Folr1
7.96e-58FFCP PHASE2:Mm9::chr7:109015811..109015852,-#_74ce7a54efd0f32e1d2f98b9ef579f4fp6@Folr1
2.1e-57FFCP PHASE2:Mm9::chr3:40512838..40512859,+#_f9babc6e32e35363dfb589d29dac02a1p2@Slc25a31
2.1e-57FFCP PHASE1:Mm9::chr3:40512838..40512859,+#_f9babc6e32e35363dfb589d29dac02a1p2@Slc25a31
3.2e-57FFCP PHASE2:Mm9::chr6:18059038..18059062,-#_69ab838b1092559098b56e4cf4445ca4p1@Asz1
3.2e-57FFCP PHASE1:Mm9::chr6:18059038..18059062,-#_69ab838b1092559098b56e4cf4445ca4p1@Asz1
4.39e-57FFCP PHASE2:Mm9::chrX:103416484..103416508,-#_75d724c0e276324bfe574dd8b58b3083p4@Taf9b
4.39e-57FFCP PHASE1:Mm9::chrX:103416484..103416508,-#_75d724c0e276324bfe574dd8b58b3083p4@Taf9b
1.84e-56FFCP PHASE2:Hg19::chr1:44584485..44584512,+#_582e7ef1ae2901c734135a1daf2f543dp2@KLF17
1.84e-56FFCP PHASE1:Hg19::chr1:44584485..44584512,+#_582e7ef1ae2901c734135a1daf2f543dp2@KLF17
2.81e-56FFCP PHASE1:Mm9::chr12:31775417..31775434,-#_fd61343d7804c17155e03bd0963e98b7p@chr12:31775417..31775434, -
2.81e-56FFCP PHASE2:Mm9::chr12:31775417..31775434,-#_fd61343d7804c17155e03bd0963e98b7p@chr12:31775417..31775434, -
2.81e-56FFCP PHASE1:Mm9::chrX:71422591..71422607,+#_fd61343d7804c17155e03bd0963e98b7p1@Tktl1
2.81e-56FFCP PHASE2:Mm9::chrX:71422591..71422607,+#_fd61343d7804c17155e03bd0963e98b7p1@Tktl1
4.4e-56FFCP PHASE1:Mm9::chr5:26334211..26334241,+#_be4b090bc3a864bf4f4da7dbf959fa84p@chr5:26334211..26334241, +
4.4e-56FFCP PHASE2:Mm9::chr5:26334211..26334241,+#_be4b090bc3a864bf4f4da7dbf959fa84p@chr5:26334211..26334241, +
6.2e-56FFCP PHASE1:Mm9::chr16:37843615..37843636,-#_0f9252427e6a79f8f55d90526ce075dep@chr16:37843615..37843636, -
6.2e-56FFCP PHASE1:Mm9::chrX:93160409..93160432,-#_0f9252427e6a79f8f55d90526ce075dep@chrX:93160409..93160432, -
6.2e-56FFCP PHASE2:Mm9::chr2:25702844..25702859,-#_0f9252427e6a79f8f55d90526ce075dep1@Sohlh1
6.2e-56FFCP PHASE1:Mm9::chr2:25702844..25702859,-#_0f9252427e6a79f8f55d90526ce075dep1@Sohlh1
6.2e-56FFCP PHASE2:Mm9::chr11:69431224..69431241,-#_0f9252427e6a79f8f55d90526ce075dep@chr11:69431224..69431241, -
6.2e-56FFCP PHASE1:Mm9::chr8:26314366..26314395,-#_0f9252427e6a79f8f55d90526ce075dep@chr8:26314366..26314395, -
6.2e-56FFCP PHASE2:Mm9::chr8:26314366..26314395,-#_0f9252427e6a79f8f55d90526ce075dep@chr8:26314366..26314395, -
6.2e-56FFCP PHASE2:Mm9::chr16:37843615..37843636,-#_0f9252427e6a79f8f55d90526ce075dep@chr16:37843615..37843636, -
6.2e-56FFCP PHASE1:Mm9::chr11:69431224..69431241,-#_0f9252427e6a79f8f55d90526ce075dep@chr11:69431224..69431241, -
6.2e-56FFCP PHASE2:Mm9::chrX:93160409..93160432,-#_0f9252427e6a79f8f55d90526ce075dep@chrX:93160409..93160432, -
1.38e-55FFCP PHASE2:Mm9::chr15:88813324..88813392,+#_56c3307e687905749bbb96cdc3e073d2p1@Mov10l1
1.38e-55FFCP PHASE1:Mm9::chr15:88813324..88813392,+#_56c3307e687905749bbb96cdc3e073d2p1@Mov10l1
3.93e-55FFCP PHASE2:Mm9::chr3:102740016..102740030,-#_4a4434213467759c1fb70e122e4a54cdp1@Sycp1
3.93e-55FFCP PHASE1:Mm9::chr3:102740016..102740030,-#_4a4434213467759c1fb70e122e4a54cdp1@Sycp1
3.32e-54FFCP PHASE1:Mm9::chr1:168168856..168168893,-#_220552ba3797f553ff2636677bd868e3p1@Mael
3.32e-54FFCP PHASE2:Mm9::chr1:168168856..168168893,-#_220552ba3797f553ff2636677bd868e3p1@Mael
5.91e-54FFCP PHASE1:Mm9::chr15:3253521..3253569,-#_f618f461bebc56a56e54308c51f3ca1ep1@Ccdc152
5.91e-54FFCP PHASE2:Mm9::chr15:3253521..3253569,-#_f618f461bebc56a56e54308c51f3ca1ep1@Ccdc152
7.21e-54FFCP PHASE2:Mm9::chr6:18059063..18059084,-#_a870a35bdeba6313acfad5a7c27467b2p2@Asz1
7.21e-54FFCP PHASE1:Mm9::chr6:18059063..18059084,-#_a870a35bdeba6313acfad5a7c27467b2p2@Asz1
3.37e-53FFCP PHASE2:Mm9::chr5:135825867..135825910,-#_c8e1f8bc81639e0f731dbdc0329ab36cp1@Fkbp6
3.37e-53FFCP PHASE1:Mm9::chr5:135825867..135825910,-#_c8e1f8bc81639e0f731dbdc0329ab36cp1@Fkbp6
5.2e-53FFCP PHASE2:Mm9::chr13:24026079..24026094,-#_f2411fe5ab8a5f507a2feca1ea727206p1@Hist1h2ba
5.2e-53FFCP PHASE1:Mm9::chr13:24026079..24026094,-#_f2411fe5ab8a5f507a2feca1ea727206p1@Hist1h2ba
7.61e-53FFCP PHASE2:Mm9::chr7:149469129..149469146,+#_3f0a1bb3f8037668cb0b960eff26ef73p@chr7:149469129..149469146, +
7.61e-53FFCP PHASE1:Mm9::chr7:149469129..149469146,+#_3f0a1bb3f8037668cb0b960eff26ef73p@chr7:149469129..149469146, +
7.61e-53FFCP PHASE2:Mm9::chr7:147143936..147143939,-#_3f0a1bb3f8037668cb0b960eff26ef73p1@Mir202
7.61e-53FFCP PHASE1:Mm9::chr7:147143936..147143939,-#_3f0a1bb3f8037668cb0b960eff26ef73p1@Mir202
1.62e-52FFCP PHASE1:Mm9::chr15:102277099..102277126,+#_b3c6238f5f2001af6952ef566c20ed14p@chr15:102277099..102277126, +
1.62e-52FFCP PHASE2:Mm9::chr15:102277099..102277126,+#_b3c6238f5f2001af6952ef566c20ed14p@chr15:102277099..102277126, +
1.8e-52FFCP PHASE2:Mm9::chr12:105339370..105339379,+#_5f32ff065dabb47111477982b63e854ep2@Serpina5
1.8e-52FFCP PHASE1:Mm9::chr12:105339370..105339379,+#_5f32ff065dabb47111477982b63e854ep2@Serpina5
2.46e-52FFCP PHASE2:Mm9::chr13:24026303..24026308,+#_e3e6ab8f1ec1c3a35d06077b8d4a644dp1@Hist1h2aa
2.46e-52FFCP PHASE1:Mm9::chr13:24026303..24026308,+#_e3e6ab8f1ec1c3a35d06077b8d4a644dp1@Hist1h2aa
2.69e-52FFCP PHASE1:Mm9::chr3:95363593..95363613,+#_c331234054dbefca57cac2fe5feaa04ap1@Hormad1
2.69e-52FFCP PHASE2:Mm9::chr3:95363593..95363613,+#_c331234054dbefca57cac2fe5feaa04ap1@Hormad1
1.97e-51FFCP PHASE2:Mm9::chr19:25580226..25580261,+#_bafba595641cff86f50b59b63892f6c7p2@Dmrt1
1.97e-51FFCP PHASE2:Mm9::chr2:148660852..148660861,+#_bafba595641cff86f50b59b63892f6c7p3@Cst9
1.97e-51FFCP PHASE1:Mm9::chr8:26314291..26314315,-#_bafba595641cff86f50b59b63892f6c7p@chr8:26314291..26314315, -
1.97e-51FFCP PHASE1:Mm9::chr19:25580226..25580261,+#_bafba595641cff86f50b59b63892f6c7p2@Dmrt1
1.97e-51FFCP PHASE2:Mm9::chr8:26314291..26314315,-#_bafba595641cff86f50b59b63892f6c7p@chr8:26314291..26314315, -
1.97e-51FFCP PHASE1:Mm9::chr2:148660852..148660861,+#_bafba595641cff86f50b59b63892f6c7p3@Cst9
2.47e-51FFCP PHASE2:Mm9::chrX:131499234..131499265,-#_e69efafc0cf1d32f05baf54f02723514p1@Nxf2
2.47e-51FFCP PHASE1:Mm9::chrX:131499234..131499265,-#_e69efafc0cf1d32f05baf54f02723514p1@Nxf2
4.3e-51FFCP PHASE2:Mm9::chr9:50369410..50369421,-#_ce32fcb4370fe32c462835b4a0544cabp2@Tex12
4.3e-51FFCP PHASE1:Mm9::chr9:50369410..50369421,-#_ce32fcb4370fe32c462835b4a0544cabp2@Tex12
5.44e-51FFCP PHASE1:Mm9::chr14:70829178..70829221,-#_235a08448440231be0fc4947965fb90dp1@Piwil2
5.44e-51FFCP PHASE2:Mm9::chr14:70829178..70829221,-#_235a08448440231be0fc4947965fb90dp1@Piwil2
6.54e-51FFCP PHASE2:Mm9::chr10:127031444..127031494,-#_63bac19331fd217130c452b67eeab3b6p@chr10:127031444..127031494, -
6.54e-51FFCP PHASE1:Mm9::chr10:127031444..127031494,-#_63bac19331fd217130c452b67eeab3b6p@chr10:127031444..127031494, -
6.54e-51FFCP PHASE2:Mm9::chr11:69431571..69431587,-#_63bac19331fd217130c452b67eeab3b6p3@Shbg
6.54e-51FFCP PHASE1:Mm9::chr19:25580353..25580364,+#_63bac19331fd217130c452b67eeab3b6p4@Dmrt1
6.54e-51FFCP PHASE1:Mm9::chr17:89600024..89600037,-#_63bac19331fd217130c452b67eeab3b6p2@Fshr
6.54e-51FFCP PHASE1:Mm9::chr2:31332380..31332388,+#_63bac19331fd217130c452b67eeab3b6p@chr2:31332380..31332388, +
6.54e-51FFCP PHASE2:Mm9::chr6:83138985..83138996,+#_63bac19331fd217130c452b67eeab3b6p10@Dctn1
6.54e-51FFCP PHASE1:Mm9::chr6:83138985..83138996,+#_63bac19331fd217130c452b67eeab3b6p10@Dctn1
6.54e-51FFCP PHASE1:Mm9::chr11:69431091..69431096,-#_63bac19331fd217130c452b67eeab3b6p@chr11:69431091..69431096, -
6.54e-51FFCP PHASE2:Mm9::chr19:25580353..25580364,+#_63bac19331fd217130c452b67eeab3b6p4@Dmrt1
6.54e-51FFCP PHASE1:Mm9::chr11:69431571..69431587,-#_63bac19331fd217130c452b67eeab3b6p3@Shbg
6.54e-51FFCP PHASE2:Mm9::chr17:89600024..89600037,-#_63bac19331fd217130c452b67eeab3b6p2@Fshr
6.54e-51FFCP PHASE2:Mm9::chr11:69431091..69431096,-#_63bac19331fd217130c452b67eeab3b6p@chr11:69431091..69431096, -
6.54e-51FFCP PHASE2:Mm9::chr2:31332380..31332388,+#_63bac19331fd217130c452b67eeab3b6p@chr2:31332380..31332388, +
7.2e-51FFCP PHASE1:Mm9::chr9:50369387..50369406,-#_835c6ee5fadb237d23744e1b7968b94ap1@Tex12
7.2e-51FFCP PHASE2:Mm9::chr9:50369387..50369406,-#_835c6ee5fadb237d23744e1b7968b94ap1@Tex12
1.26e-50FFCP PHASE2:Mm9::chr18:47081451..47081490,+#_1b73297644c46286c1d881c12a46a4cbp1@Gm949
1.26e-50FFCP PHASE1:Mm9::chr18:47081451..47081490,+#_1b73297644c46286c1d881c12a46a4cbp1@Gm949
1.62e-50FFCP PHASE1:Mm9::chr17:50432917..50432931,-#_2fa7b65b2f5972625ea088becbaf8b31p1@Dazl
1.62e-50FFCP PHASE2:Mm9::chr17:50432917..50432931,-#_2fa7b65b2f5972625ea088becbaf8b31p1@Dazl
3.51e-50FFCP PHASE1:Mm9::chr15:89240661..89240702,-#_7b322c6df3ac294df56dec2b22be45f5p1@Syce3
3.51e-50FFCP PHASE2:Mm9::chr15:89240661..89240702,-#_7b322c6df3ac294df56dec2b22be45f5p1@Syce3
3.85e-50FFCP PHASE2:Mm9::chr1:36739960..36739999,-#_6c0d9f2ef2a327e83f4397c3832e5fd7p1@Fam178b
3.85e-50FFCP PHASE1:Mm9::chr1:36739960..36739999,-#_6c0d9f2ef2a327e83f4397c3832e5fd7p1@Fam178b
5.34e-50FFCP PHASE1:Hg19::chr9:127269661..127269719,-#_81be119bb69c9f513cd8464beb38d749p1@NR5A1
5.34e-50FFCP PHASE2:Hg19::chr9:127269661..127269719,-#_81be119bb69c9f513cd8464beb38d749p1@NR5A1
3.59e-49FFCP PHASE2:Mm9::chr7:20074394..20074416,+#_64e3ea48af51ae5fa39adcf2df184e5fp1@Exoc3l2
3.59e-49FFCP PHASE1:Mm9::chr7:20074394..20074416,+#_64e3ea48af51ae5fa39adcf2df184e5fp1@Exoc3l2

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0009196&oldid=3277956"