Personal tools

UBERON:0010742

From FANTOM5_SSTAR

Revision as of 18:09, 12 September 2014 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:bone of pelvic complex
Namespace:FANTOM
Definition:"A bone that is part of a pelvic complex. Examples: pubis, ischium, fot phalanx, any tarsal bone, any bone of the pelvic fin or girdle." [UBERON:cjm, UBERONREF:0000003]
Xrefs:
links:
MA:0000660
Synonyms: "hindlimb bone" RELATED [MA:0000660, UBERONREF:0000003]
Comments:Note that the MA class called 'hindlimb bone' belongs here, as it includes bones in the pelvic girdle

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0010740(bone of appendage girdle complex)
part_of:UBERON:0010709(pelvic complex),UBERON:0002091(appendicular skeleton),UBERON:0010709(pelvic complex)



Children

is a:UBERON:0003464 (hindlimb bone)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010742 (bone of pelvic complex), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.4e-49FFCP PHASE1:Mm9::chr11:77624716..77624729,+#_4c7565a562a028c676aac7fa47c24fa9p26@Myo18a
3.4e-49FFCP PHASE2:Mm9::chr11:77624716..77624729,+#_4c7565a562a028c676aac7fa47c24fa9p26@Myo18a
4.96e-49FFCP PHASE1:Mm9::chr8:75097542..75097549,+#_c143ff91af857415abb0d9293717a3c9p@chr8:75097542..75097549, +
4.96e-49FFCP PHASE1:Mm9::chr2:32482372..32482381,+#_c143ff91af857415abb0d9293717a3c9p@chr2:32482372..32482381, +
4.96e-49FFCP PHASE2:Mm9::chr8:75097542..75097549,+#_c143ff91af857415abb0d9293717a3c9p@chr8:75097542..75097549, +
4.96e-49FFCP PHASE1:Mm9::chr9:21934585..21934591,-#_c143ff91af857415abb0d9293717a3c9p@chr9:21934585..21934591, -
4.96e-49FFCP PHASE2:Mm9::chr2:32482372..32482381,+#_c143ff91af857415abb0d9293717a3c9p@chr2:32482372..32482381, +
4.96e-49FFCP PHASE2:Mm9::chr9:21934585..21934591,-#_c143ff91af857415abb0d9293717a3c9p@chr9:21934585..21934591, -
3.15e-44FFCP PHASE1:Mm9::chr6:51525810..51525817,+#_6e7314186a783a6206305d51a1cbf737p@chr6:51525810..51525817, +
3.15e-44FFCP PHASE2:Mm9::chr6:51525810..51525817,+#_6e7314186a783a6206305d51a1cbf737p@chr6:51525810..51525817, +
9.78e-40FFCP PHASE1:Mm9::chr19:4876870..4876880,-#_1d4d6d2998463ce9e5f0012bc5107c13p@chr19:4876870..4876880, -
9.78e-40FFCP PHASE2:Mm9::chr19:4876870..4876880,-#_1d4d6d2998463ce9e5f0012bc5107c13p@chr19:4876870..4876880, -
1.15e-39FFCP PHASE1:Mm9::chr11:67063327..67063335,+#_14112546901e8e065e6539015285a4d6p@chr11:67063327..67063335, +
1.15e-39FFCP PHASE2:Mm9::chr16:24096441..24096449,+#_14112546901e8e065e6539015285a4d6p@chr16:24096441..24096449, +
1.15e-39FFCP PHASE2:Mm9::chr1:174140324..174140335,-#_14112546901e8e065e6539015285a4d6p@chr1:174140324..174140335, -
1.15e-39FFCP PHASE1:Mm9::chr1:174140324..174140335,-#_14112546901e8e065e6539015285a4d6p@chr1:174140324..174140335, -
1.15e-39FFCP PHASE2:Mm9::chr11:67063327..67063335,+#_14112546901e8e065e6539015285a4d6p@chr11:67063327..67063335, +
1.15e-39FFCP PHASE1:Mm9::chr16:24096441..24096449,+#_14112546901e8e065e6539015285a4d6p@chr16:24096441..24096449, +
1.15e-39FFCP PHASE1:Mm9::chr6:4490674..4490679,+#_14112546901e8e065e6539015285a4d6p@chr6:4490674..4490679, +
1.15e-39FFCP PHASE2:Mm9::chr6:4490674..4490679,+#_14112546901e8e065e6539015285a4d6p@chr6:4490674..4490679, +
1.55e-39FFCP PHASE2:Mm9::chr1:174143249..174143260,-#_c6aebc257d317f23fe53b385dff7c9c9p@chr1:174143249..174143260, -
1.55e-39FFCP PHASE1:Mm9::chr1:174143249..174143260,-#_c6aebc257d317f23fe53b385dff7c9c9p@chr1:174143249..174143260, -
3.03e-39FFCP PHASE2:Mm9::chr6:51525869..51525891,+#_a1e27f421d9993169fb20cca18b2c28cp@chr6:51525869..51525891, +
3.03e-39FFCP PHASE1:Mm9::chr6:51525869..51525891,+#_a1e27f421d9993169fb20cca18b2c28cp@chr6:51525869..51525891, +
9.31e-39FFCP PHASE2:Mm9::chr11:102130083..102130092,+#_21b91b9a29457ccfd733e572a14adbebp3@Asb16
9.31e-39FFCP PHASE1:Mm9::chr11:102130083..102130092,+#_21b91b9a29457ccfd733e572a14adbebp3@Asb16
2.41e-35FFCP PHASE1:Mm9::chr7:133604286..133604297,-#_b45423e3d29dc30e0272fdf4fb8b09d0p@chr7:133604286..133604297, -
2.41e-35FFCP PHASE2:Mm9::chr7:133604286..133604297,-#_b45423e3d29dc30e0272fdf4fb8b09d0p@chr7:133604286..133604297, -
2.95e-35FFCP PHASE2:Mm9::chr4:138365748..138365759,-#_7a0e1787c48e54de872ad9b6e8603ac1p5@Pla2g5
2.95e-35FFCP PHASE1:Mm9::chr4:138365748..138365759,-#_7a0e1787c48e54de872ad9b6e8603ac1p5@Pla2g5
9.53e-34FFCP PHASE1:Mm9::chr8:74049600..74049612,-#_f7b23a16a44df7f8d1286e07199093e8p2@uc009mdq.1
9.53e-34FFCP PHASE2:Mm9::chr8:74049600..74049612,-#_f7b23a16a44df7f8d1286e07199093e8p2@uc009mdq.1
1.23e-33FFCP PHASE2:Mm9::chr2:164773241..164773248,+#_903216079decfdac1ee5d39fb79d0003p3@Mmp9
1.23e-33FFCP PHASE1:Mm9::chr2:164773241..164773248,+#_903216079decfdac1ee5d39fb79d0003p3@Mmp9
1.58e-33FFCP PHASE1:Mm9::chr7:3567707..3567718,-#_8af96dede6f168582d2a4ed6b89dc174p2@Oscar
1.58e-33FFCP PHASE2:Mm9::chr7:3567707..3567718,-#_8af96dede6f168582d2a4ed6b89dc174p2@Oscar
1.58e-33FFCP PHASE1:Mm9::chr1:166815111..166815121,-#_8af96dede6f168582d2a4ed6b89dc174p@chr1:166815111..166815121, -
1.58e-33FFCP PHASE2:Mm9::chr1:166815111..166815121,-#_8af96dede6f168582d2a4ed6b89dc174p@chr1:166815111..166815121, -
2.04e-33FFCP PHASE2:Mm9::chr9:70799951..70799962,-#_057f23d58537348af51cad0e63acbe21p4@Lipc
2.04e-33FFCP PHASE1:Mm9::chr11:75409652..75409664,+#_057f23d58537348af51cad0e63acbe21p@chr11:75409652..75409664, +
2.04e-33FFCP PHASE2:Mm9::chr11:75409652..75409664,+#_057f23d58537348af51cad0e63acbe21p@chr11:75409652..75409664, +
2.04e-33FFCP PHASE1:Mm9::chr9:70799951..70799962,-#_057f23d58537348af51cad0e63acbe21p4@Lipc
3.38e-33FFCP PHASE2:Mm9::chr15:102196702..102196713,-#_47a2e7a3acad8fde5af98f6c20440f17p6@Sp7
3.38e-33FFCP PHASE1:Mm9::chr15:102196702..102196713,-#_47a2e7a3acad8fde5af98f6c20440f17p6@Sp7
7.17e-33FFCP PHASE1:Mm9::chr8:126415826..126415839,+#_6b328610df57b1492a734dce9f55c774p@chr8:126415826..126415839, +
7.17e-33FFCP PHASE2:Mm9::chr8:126415826..126415839,+#_6b328610df57b1492a734dce9f55c774p@chr8:126415826..126415839, +
7.17e-33FFCP PHASE1:Mm9::chr18:76271498..76271508,+#_6b328610df57b1492a734dce9f55c774p@chr18:76271498..76271508, +
7.17e-33FFCP PHASE2:Mm9::chr18:76271498..76271508,+#_6b328610df57b1492a734dce9f55c774p@chr18:76271498..76271508, +
2.67e-30FFCP PHASE2:Mm9::chr2:32482387..32482399,+#_2c5493be74b4991d963508b39e411cb7p@chr2:32482387..32482399, +
2.67e-30FFCP PHASE1:Mm9::chr2:32482387..32482399,+#_2c5493be74b4991d963508b39e411cb7p@chr2:32482387..32482399, +
1.1e-29FFCP PHASE2:Mm9::chr12:70396969..70396979,+#_61183e2557ce9b37d8c26cfc9defe729p@chr12:70396969..70396979, +
1.1e-29FFCP PHASE1:Mm9::chr12:70396969..70396979,+#_61183e2557ce9b37d8c26cfc9defe729p@chr12:70396969..70396979, +
1.1e-29FFCP PHASE2:Mm9::chr15:58649683..58649688,-#_61183e2557ce9b37d8c26cfc9defe729p@chr15:58649683..58649688, -
1.1e-29FFCP PHASE1:Mm9::chr15:58649683..58649688,-#_61183e2557ce9b37d8c26cfc9defe729p@chr15:58649683..58649688, -
1.46e-29FFCP PHASE2:Mm9::chr7:133590998..133591009,-#_6b1a3a3d3e0218dea9a365ffc12855bap@chr7:133590998..133591009, -
1.46e-29FFCP PHASE1:Mm9::chr7:133590998..133591009,-#_6b1a3a3d3e0218dea9a365ffc12855bap@chr7:133590998..133591009, -
1.73e-29FFCP PHASE2:Mm9::chr18:60751417..60751432,-#_0364988b1715f2a674ce7790cfc75d4cp2@Myoz3
1.73e-29FFCP PHASE1:Mm9::chr18:60751417..60751432,-#_0364988b1715f2a674ce7790cfc75d4cp2@Myoz3
2.42e-29FFCP PHASE1:Mm9::chr11:67051354..67051366,+#_c86539f405fa89081d10024c8232edcbp2@Myh4
2.42e-29FFCP PHASE2:Mm9::chr11:67051354..67051366,+#_c86539f405fa89081d10024c8232edcbp2@Myh4
7.46e-29FFCP PHASE1:Mm9::chr1:57155729..57155740,-#_8c6a54cdcaf1e4068f3cc0d72c3d6154p@chr1:57155729..57155740, -
7.46e-29FFCP PHASE2:Mm9::chr1:57155729..57155740,-#_8c6a54cdcaf1e4068f3cc0d72c3d6154p@chr1:57155729..57155740, -
9.26e-29FFCP PHASE2:Mm9::chr11:67056544..67056589,-#_4c1ef8286f88d98a937acf2018884089p@chr11:67056544..67056589, -
9.26e-29FFCP PHASE2:Mm9::chr4:43597258..43597265,-#_4c1ef8286f88d98a937acf2018884089p1@Msmp
9.26e-29FFCP PHASE1:Mm9::chr4:43597258..43597265,-#_4c1ef8286f88d98a937acf2018884089p1@Msmp
9.26e-29FFCP PHASE1:Mm9::chr11:67056544..67056589,-#_4c1ef8286f88d98a937acf2018884089p@chr11:67056544..67056589, -
1.15e-28FFCP PHASE1:Mm9::chrY:2858251..2858257,+#_5be37db48d5771d8fef92bfa02d40c82p@chrY:2858251..2858257, +
1.15e-28FFCP PHASE2:Mm9::chrY:2858251..2858257,+#_5be37db48d5771d8fef92bfa02d40c82p@chrY:2858251..2858257, +
1.15e-28FFCP PHASE2:Mm9::chr6:90552017..90552024,+#_5be37db48d5771d8fef92bfa02d40c82p@chr6:90552017..90552024, +
1.15e-28FFCP PHASE1:Mm9::chr6:90552017..90552024,+#_5be37db48d5771d8fef92bfa02d40c82p@chr6:90552017..90552024, +
1.43e-28FFCP PHASE2:Mm9::chr6:34436258..34436292,+#_fa9732815dd341b6a5573a3ba4bbf2e2p@chr6:34436258..34436292, +
1.43e-28FFCP PHASE1:Mm9::chr6:34436258..34436292,+#_fa9732815dd341b6a5573a3ba4bbf2e2p@chr6:34436258..34436292, +
2.2e-28FFCP PHASE2:Mm9::chr11:67069796..67069817,-#_89675832a7cc7fe579aefe39ca86c593p@chr11:67069796..67069817, -
2.2e-28FFCP PHASE1:Mm9::chr11:67069796..67069817,-#_89675832a7cc7fe579aefe39ca86c593p@chr11:67069796..67069817, -
2.72e-28FFCP PHASE1:Mm9::chr8:107702369..107702386,+#_a23946343a7573998c6885213dcdac68p@chr8:107702369..107702386, +
2.72e-28FFCP PHASE2:Mm9::chr8:107702369..107702386,+#_a23946343a7573998c6885213dcdac68p@chr8:107702369..107702386, +
3.45e-28FFCP PHASE1:Mm9::chr18:78254135..78254146,-#_c51d5fa02b5eb01e312926cdeecbea3ap1@Siglec15
3.45e-28FFCP PHASE2:Mm9::chr18:78254135..78254146,-#_c51d5fa02b5eb01e312926cdeecbea3ap1@Siglec15
6.5e-28FFCP PHASE2:Mm9::chr7:133591490..133591500,-#_637481e24141f6abc24948abd6848241p6@Atp2a1
6.5e-28FFCP PHASE1:Mm9::chr7:133591490..133591500,-#_637481e24141f6abc24948abd6848241p6@Atp2a1
8.9e-28FFCP PHASE1:Mm9::chr7:133591156..133591165,-#_0ff5a88b3d79ace1d8c2d133a0c6ee02p7@Atp2a1
8.9e-28FFCP PHASE2:Mm9::chr7:133591156..133591165,-#_0ff5a88b3d79ace1d8c2d133a0c6ee02p7@Atp2a1
1.42e-27FFCP PHASE2:Mm9::chr7:133592162..133592188,-#_6896544f642dac33e5efc94126e3150bp@chr7:133592162..133592188, -
1.42e-27FFCP PHASE1:Mm9::chr7:133592162..133592188,-#_6896544f642dac33e5efc94126e3150bp@chr7:133592162..133592188, -
1.42e-27FFCP PHASE2:Mm9::chr7:133600635..133600663,+#_6896544f642dac33e5efc94126e3150bp@chr7:133600635..133600663, +
1.42e-27FFCP PHASE1:Mm9::chr7:133600635..133600663,+#_6896544f642dac33e5efc94126e3150bp@chr7:133600635..133600663, +
6.75e-27FFCP PHASE1:Mm9::chr11:94837662..94837673,-#_c7bcdbd08f15b0854200da4ed00ea513p4@Sgca
6.75e-27FFCP PHASE2:Mm9::chr11:94837662..94837673,-#_c7bcdbd08f15b0854200da4ed00ea513p4@Sgca
1.66e-26FFCP PHASE1:Mm9::chr5:104754379..104754387,+#_98fefd4751a34470b9db715d8580fa36p1@Mepe
1.66e-26FFCP PHASE2:Mm9::chr5:104754379..104754387,+#_98fefd4751a34470b9db715d8580fa36p1@Mepe
3.47e-26FFCP PHASE2:Mm9::chr12:81581216..81581231,+#_54f15ffb163dd698ae0ef766db27378bp@chr12:81581216..81581231, +
3.47e-26FFCP PHASE1:Mm9::chr12:81581216..81581231,+#_54f15ffb163dd698ae0ef766db27378bp@chr12:81581216..81581231, +
3.47e-26FFCP PHASE2:Mm9::chr16:32400888..32400899,+#_54f15ffb163dd698ae0ef766db27378bp2@Tm4sf19
3.47e-26FFCP PHASE1:Mm9::chr16:32400888..32400899,+#_54f15ffb163dd698ae0ef766db27378bp2@Tm4sf19
1.12e-25FFCP PHASE1:Mm9::chr17:34176173..34176200,+#_41b28ffa08f9d6125a51e79ed2f246e8p5@Col11a2
1.12e-25FFCP PHASE2:Mm9::chr17:34176173..34176200,+#_41b28ffa08f9d6125a51e79ed2f246e8p5@Col11a2
1.12e-25FFCP PHASE1:Mm9::chr15:97806574..97806585,-#_41b28ffa08f9d6125a51e79ed2f246e8p@chr15:97806574..97806585, -
1.12e-25FFCP PHASE2:Mm9::chr15:97806574..97806585,-#_41b28ffa08f9d6125a51e79ed2f246e8p@chr15:97806574..97806585, -
1.36e-25FFCP PHASE1:Mm9::chr2:180890942..180890956,-#_356645f344b63bdfa9ca63fdd02d4222p@chr2:180890942..180890956, -
1.36e-25FFCP PHASE1:Mm9::chr18:78254174..78254185,-#_356645f344b63bdfa9ca63fdd02d4222p2@Siglec15

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0010742&oldid=3278038"