UBERON:0010740
From FANTOM5_SSTAR
| Name: | bone of appendage girdle complex | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "A bone that is part of an appendage girdle complex (i.e. any bone in a limb, fin or girdle)." [UBERON:cjm, UBERONREF:0000003] | |
| Xrefs: |
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| Synonyms: |
"bone of extended limb/fin region" RELATED [UBERON:cjm, UBERONREF:0000003] "limb bone" RELATED [MA:0000688, UBERONREF:0000003] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001474(bone element) |
|---|---|
| part_of: | UBERON:0010707(appendage girdle complex),UBERON:0002091(appendicular skeleton),UBERON:0010707(appendage girdle complex) |
Children
| is a: | UBERON:0004375 (bone of free limb or fin),UBERON:0010742 (bone of pelvic complex) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 1350-25C3 (bone (os femoris), neonate N20)
- 1525-43A6 (bone (os femoris), neonate N16)
- 1985-43F5 (bone (os femoris), neonate N02)
- 56-12G2 (bone (os femoris), adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010740 (bone of appendage girdle complex), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
