FFCP PHASE2:Hg19::chr3:181429704..181429722,+
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Short description: | p1@SOX2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SOX2_5end |
Coexpression cluster: | C1056_small_Neural_Astrocyte_teratocarcinoma_H9_hippocampus_testicular |
Association with transcript: | 0bp_to_ENST00000325404, ENST00000431565, NM_003106, uc003fkx.2_5end |
EntrezGene: | 6657 |
HGNC: | 11195 |
UniProt: | P48431 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SOX2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neural cell | 5.17e-17 | 25 |
neurectodermal cell | 1.43e-12 | 59 |
neuronal stem cell | 6.59e-11 | 8 |
ectodermal cell | 1.56e-10 | 72 |
neuron associated cell | 7.86e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 7.86e-09 | 17 |
neuron | 1.35e-08 | 6 |
neuroblast | 1.35e-08 | 6 |
electrically signaling cell | 1.35e-08 | 6 |
oligodendrocyte | 1.61e-08 | 7 |
Showing 1 to 10 of 18 entries
Ontology term | p-value | n |
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nervous system | 4.09e-63 | 89 |
central nervous system | 6.12e-63 | 81 |
neural tube | 1.45e-54 | 56 |
neural rod | 1.45e-54 | 56 |
future spinal cord | 1.45e-54 | 56 |
neural keel | 1.45e-54 | 56 |
regional part of nervous system | 2.70e-51 | 53 |
regional part of brain | 2.70e-51 | 53 |
brain | 5.12e-50 | 68 |
future brain | 5.12e-50 | 68 |
Showing 1 to 10 of 67 entries