FFCP PHASE2:Hg19::chr13:112721490..112721504,+
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Short description: | p2@SOX1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SOX1_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | -408bp_to_ENST00000330949, NM_005986, uc001vsb.1_5end |
EntrezGene: | SOX1 |
HGNC: | 11189 |
UniProt: | O00570 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@SOX1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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astrocyte of the cerebral cortex | 2.42e-14 | 3 |
neural cell | 3.54e-13 | 25 |
neuronal stem cell | 4.08e-12 | 8 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
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central nervous system | 2.86e-18 | 81 |
regional part of telencephalon | 3.39e-18 | 32 |
cerebral hemisphere | 3.39e-18 | 32 |
cerebral cortex | 5.36e-18 | 25 |
pallium | 5.36e-18 | 25 |
brain grey matter | 4.17e-17 | 34 |
gray matter | 4.17e-17 | 34 |
telencephalon | 4.17e-17 | 34 |
nervous system | 2.73e-16 | 89 |
neurectoderm | 1.26e-14 | 86 |
Showing 1 to 10 of 36 entries
Ontology term | p-value | n |
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neuroectodermal tumor | 9.01e-10 | 10 |
germ cell and embryonal cancer | 1.44e-07 | 22 |
germ cell cancer | 1.44e-07 | 22 |
Showing 1 to 3 of 3 entries