FFCP PHASE2:Hg19::chr13:28543431..28543487,-
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| Short description: | p1@CDX2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_CDX2_5end |
| Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
| Association with transcript: | -114bp_to_NM_001265, uc001urv.2_5end |
| EntrezGene: | CDX2 |
| HGNC: | 1806 |
| UniProt: | Q99626 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p1@CDX2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell of stomach | 1.08e-13 | 3 |
| intestinal epithelial cell | 4.67e-11 | 4 |
| epithelial cell of large intestine | 2.77e-10 | 2 |
| epithelial cell of alimentary canal | 4.77e-10 | 20 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| gastrointestinal system | 9.43e-52 | 25 |
| intestine | 1.61e-40 | 17 |
| large intestine | 8.49e-26 | 11 |
| lower digestive tract | 5.46e-23 | 5 |
| rectum | 9.36e-19 | 4 |
| colon | 3.97e-18 | 9 |
| small intestine | 6.47e-15 | 4 |
| pancreas | 1.56e-14 | 10 |
| stomach | 5.28e-13 | 8 |
| food storage organ | 5.28e-13 | 8 |
Showing 1 to 10 of 25 entries
| Ontology term | p-value | n |
|---|---|---|
| gastrointestinal system cancer | 6.08e-19 | 14 |
| adenocarcinoma | 1.79e-12 | 25 |
| tubular adenocarcinoma | 1.77e-09 | 2 |
| carcinoma | 5.79e-09 | 106 |
| cell type cancer | 2.23e-07 | 143 |
Showing 1 to 5 of 5 entries
