FFCP PHASE2:Hg19::chr3:38691158..38691203,-
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Short description: | p1@SCN5A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCN5A_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000413689, ENST00000425664, ENST00000443581, ENST00000451551, ENST00000491944, NM_000335, NM_001099404, NM_001099405, NM_001160160, NM_001160161, NM_198056, uc003cil.3, uc003cin.2, uc003cio.2, uc010hhi.2, uc010hhk.2, uc011ayr.1_5end |
EntrezGene: | SCN5A |
HGNC: | 10593 |
UniProt: | E9PEK2E9PG18E9PEF3Q14524Q86V90E9PHB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SCN5A |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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endothelial cell | 1.14e-21 | 36 |
meso-epithelial cell | 2.58e-20 | 45 |
endothelial cell of vascular tree | 7.21e-20 | 24 |
lining cell | 1.78e-17 | 58 |
barrier cell | 1.78e-17 | 58 |
blood vessel endothelial cell | 2.56e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.56e-16 | 18 |
mesodermal cell | 7.54e-15 | 121 |
epithelial cell of nephron | 1.84e-09 | 15 |
endothelial cell of artery | 5.09e-09 | 9 |
Showing 1 to 10 of 15 entries
Ontology term | p-value | n |
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blood vessel endothelium | 2.56e-16 | 18 |
endothelium | 2.56e-16 | 18 |
cardiovascular system endothelium | 2.56e-16 | 18 |
simple squamous epithelium | 7.07e-15 | 22 |
cell layer | 2.84e-13 | 309 |
epithelium | 5.77e-13 | 306 |
squamous epithelium | 4.98e-12 | 25 |
vasculature | 3.94e-11 | 78 |
vascular system | 3.94e-11 | 78 |
epithelial tube | 5.84e-11 | 117 |
Showing 1 to 10 of 46 entries