UBERON:0000965
From FANTOM5_SSTAR
| Name: | lens | |
|---|---|---|
| Definition: | "Transparent part of eye that helps to refract light to be focused on the retina." [Wikipedia:Lens_(anatomy)] | |
| Xrefs: |
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| Synonyms: |
"camera-type eye lens" EXACT [GO:0002088] "crystalline lens" RELATED [BTO:0000723] "eye lens" EXACT [] "lens crystallina" EXACT [Wikipedia:Lens_%28anatomy%29] "ocular lens" RELATED [BTO:0000723] | |
| Comments: | This class excludes compound eye corneal lenses. The naming may be too vertebrate-centric, in which case it could be renamed to camera-eye lens | |
| Alt_id: | UBERON:FBbt_00004199-FMA_58241-MA_0000275-MIAA_0000141-XAO_0000008-ZFA_0000035 | |
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004121(ectoderm-derived structure),UBERON:0005389(transparent eye structure) |
|---|---|
| develops_from: | UBERON:0003073(lens placode),UBERON:0005426(lens vesicle) |
| part_of: | UBERON:0001801(anterior segment of eyeball) |
Children
| part of: | UBERON:0001803 (epithelium of lens),CL:0002222 (vertebrate lens cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10647-109A8 (lens epithelial cell line:SRA 01/04)
- 11529-119I8 (Lens Epithelial Cells, donor1)
- 11609-120I7 (Lens Epithelial Cells, donor2)
- 11690-122I7 (Lens Epithelial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000965 (lens), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
