UBERON:0001630
From FANTOM5_SSTAR
| Name: | muscle organ | |
|---|---|---|
| Definition: | "Organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work[GO]. Nonparenchymatous organ that primarily consists of skeletal muscle tissue aggregated into macroscopic fasciculi by connective tissue; together with other muscles, it constitutes the muscular system. Examples: biceps, diaphragm, masseter, right third external intercostal muscle, external oblique, levator ani, serratus anterior[FMA]." [GO:0007517] | |
| Xrefs: |
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| Synonyms: |
"muscle" EXACT [ZFA:0005145] "skeletal muscle system" RELATED [BTO:0001103] "somatic muscle" RELATED [BTO:0001103] | |
| Alt_id: | UBERON:FMA_5022-MIAA_0000302-XAO_0000174 | |
| Subset: |
organ_slim uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000062(organ),UBERON:0004120(mesoderm-derived structure),UBERON:0005090(muscle structure) |
|---|---|
| part_of: | UBERON:0000383(musculature of body) |
Children
| is a: | UBERON:0001665 (triceps surae),UBERON:0001774 (muscle of trunk),UBERON:0002463 (hamstring muscle),UBERON:0003831 (respiratory system muscle),UBERON:0004277 (eye muscle),UBERON:0014892 (skeletal muscle organ) |
|---|---|
| disjoint from: | UBERON:0001474 (bone element) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10069-101I6 (diaphragm, fetal, donor1)
- 10264-104D3
- 10269-104D8
- 10270-104D9
- 10271-104E1
- 10272-104E2 (eye - muscle inferior rectus, donor1)
- 10281-104F2
- 10282-104F3 (skeletal muscle - soleus muscle, donor1)
- 10292-104G4 (achilles tendon, donor2)
- 10297-104G9 (eye - muscle superior, donor2)
... further results Mouse (Mus musculus)
- 10069-101I6 (diaphragm, fetal, donor1)
- 10264-104D3
- 10269-104D8
- 10270-104D9
- 10271-104E1
- 10272-104E2 (eye - muscle inferior rectus, donor1)
- 10281-104F2
- 10282-104F3 (skeletal muscle - soleus muscle, donor1)
- 10292-104G4 (achilles tendon, donor2)
- 10297-104G9 (eye - muscle superior, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001630 (muscle organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
