FFCP PHASE2:Mm9::chr18:37979157..37979172,+
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Short description: | p11@Pcdhga11, p11@Pcdhga12, p11@Pcdhga3, p11@Pcdhga8, p11@Pcdhga9, p11@Pcdhgb6, p11@Pcdhgc3, p11@Pcdhgc4, p11@Pcdhgc5 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Pcdhga11_5end, CAGE_peak_11_at_Pcdhga12_5end, CAGE_peak_11_at_Pcdhga3_5end, CAGE_peak_11_at_Pcdhga8_5end, CAGE_peak_11_at_Pcdhga9_5end, CAGE_peak_11_at_Pcdhgb6_5end, CAGE_peak_11_at_Pcdhgc3_5end, CAGE_peak_11_at_Pcdhgc4_5end, CAGE_peak_11_at_Pcdhgc5_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -27bp_to_ENSMUST00000055935, NM_033583, uc008erg.1_5end |
EntrezGene: | 93703,93706,93707,93708,93711,93716,93717,93723,93724 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p11@Pcdhga11p11@Pcdhga12p11@Pcdhga3p11@Pcdhga8p11@Pcdhga9p11@Pcdhgb6p11@Pcdhgc3p11@Pcdhgc4p11@Pcdhgc5 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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oligodendrocyte precursor cell | 1.77e-10 | 8 |
migratory neural crest cell | 3.77e-08 | 10 |
neuron associated cell | 3.77e-08 | 10 |
glial cell (sensu Vertebrata) | 3.77e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 3.77e-08 | 10 |
glial cell | 3.77e-08 | 10 |
glioblast | 3.77e-08 | 10 |
glioblast (sensu Vertebrata) | 3.77e-08 | 10 |
oligodendrocyte | 2.91e-07 | 6 |
macroglial cell | 2.91e-07 | 6 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
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brain | 6.27e-28 | 47 |
future brain | 6.27e-28 | 47 |
regional part of brain | 2.05e-26 | 46 |
central nervous system | 4.54e-26 | 73 |
nervous system | 3.99e-25 | 75 |
regional part of nervous system | 4.30e-25 | 54 |
neural tube | 2.17e-24 | 52 |
neural rod | 2.17e-24 | 52 |
future spinal cord | 2.17e-24 | 52 |
neural keel | 2.17e-24 | 52 |
Showing 1 to 10 of 44 entries