FFCP PHASE1:Hg19::chr10:102106933..102106948,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p4@SCD |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_SCD_5end |
| Coexpression cluster: | C2969_Melanocyte_Meningeal_Fibroblast_gall_breast_glioblastoma_melanoma |
| Association with transcript: | 52bp_to_ENST00000370355_5end |
| EntrezGene: | SCD |
| HGNC: | 10571 |
| UniProt: | O00767 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@SCD |
|---|
0
10
20
30
40
50
60
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 1.16e-15 | 253 |
| ectodermal cell | 2.40e-10 | 72 |
| embryonic cell | 6.68e-10 | 250 |
| migratory neural crest cell | 3.22e-07 | 41 |
| endodermal cell | 6.12e-07 | 58 |
| neurectodermal cell | 8.31e-07 | 59 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| ectoderm-derived structure | 4.17e-18 | 171 |
| ectoderm | 4.17e-18 | 171 |
| presumptive ectoderm | 4.17e-18 | 171 |
| cell layer | 3.70e-14 | 309 |
| epithelium | 2.76e-13 | 306 |
| organ system subdivision | 2.90e-13 | 223 |
| ecto-epithelium | 8.47e-13 | 104 |
| nervous system | 6.20e-12 | 89 |
| central nervous system | 1.67e-10 | 81 |
| neural plate | 1.76e-09 | 82 |
Showing 1 to 10 of 22 entries
| Ontology term | p-value | n |
|---|---|---|
| cell type cancer | 1.88e-08 | 143 |
| disease of cellular proliferation | 1.89e-08 | 239 |
| cancer | 2.09e-08 | 235 |
| carcinoma | 3.14e-07 | 106 |
Showing 1 to 4 of 4 entries
