FFCP PHASE1:Hg19::chr10:97050777..97050806,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p2@PDLIM1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_PDLIM1_5end |
| Coexpression cluster: | C2083_Placental_acantholytic_Amniotic_Endothelial_Tracheal_Urothelial_Fibroblast |
| Association with transcript: | 0bp_to_ENST00000329399, NM_020992, uc001kkh.2, uc001kki.2, uc001kkj.1, uc009xuv.2_5end |
| EntrezGene: | PDLIM1 |
| HGNC: | 2067 |
| UniProt: | O00151 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@PDLIM1 |
|---|
0
50
100
150
200
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 4.78e-22 | 253 |
| embryonic cell | 1.44e-20 | 250 |
| squamous epithelial cell | 1.19e-13 | 63 |
| mesodermal cell | 3.14e-10 | 121 |
| endo-epithelial cell | 2.55e-09 | 42 |
| endodermal cell | 4.85e-09 | 58 |
| lining cell | 6.48e-09 | 58 |
| barrier cell | 6.48e-09 | 58 |
| endothelial cell of vascular tree | 9.61e-09 | 24 |
| endothelial cell | 5.66e-08 | 36 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| endoderm-derived structure | 1.69e-19 | 160 |
| endoderm | 1.69e-19 | 160 |
| presumptive endoderm | 1.69e-19 | 160 |
| epithelial tube | 2.42e-17 | 117 |
| digestive system | 1.19e-15 | 145 |
| digestive tract | 1.19e-15 | 145 |
| primitive gut | 1.19e-15 | 145 |
| circulatory system | 1.47e-14 | 112 |
| unilaminar epithelium | 1.07e-13 | 148 |
| cardiovascular system | 2.23e-13 | 109 |
Showing 1 to 10 of 43 entries
