FFCP PHASE1:Hg19::chr12:119419294..119419308,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p2@SRRM4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_SRRM4_5end |
| Coexpression cluster: | C1657_pineal_cerebellum_temporal_occipital_duodenum_middle_brain |
| Association with transcript: | 0bp_to_ENST00000267260, NM_194286_5end |
| EntrezGene: | SRRM4 |
| HGNC: | 29389 |
| UniProt: | A7MD48 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@SRRM4 |
|---|
0
10
20
30
40
50
60
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 8.38e-80 | 89 |
| central nervous system | 2.39e-76 | 81 |
| regional part of nervous system | 3.19e-74 | 53 |
| regional part of brain | 3.19e-74 | 53 |
| neural tube | 2.90e-73 | 56 |
| neural rod | 2.90e-73 | 56 |
| future spinal cord | 2.90e-73 | 56 |
| neural keel | 2.90e-73 | 56 |
| brain | 3.12e-71 | 68 |
| future brain | 3.12e-71 | 68 |
Showing 1 to 10 of 76 entries
| Ontology term | p-value | n |
|---|---|---|
| neuroendocrine tumor | 6.36e-11 | 6 |
| neuroectodermal tumor | 6.35e-09 | 10 |
Showing 1 to 2 of 2 entries
