FFCP PHASE2:Hg19::chr20:34025900..34025919,-
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Short description: | p3@GDF5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GDF5_5end |
Coexpression cluster: | C2614_mesenchymal_leiomyoma_mesothelioma_Anulus_Nucleus_Smooth_epithelioid |
Association with transcript: | 29bp_to_uc010gfc.1_5end |
EntrezGene: | GDF5 |
HGNC: | 4220 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@GDF5 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mesenchymal stem cell of the bone marrow | 8.72e-14 | 6 |
stromal cell | 4.69e-11 | 28 |
chondroblast | 4.24e-09 | 6 |
chondrocyte | 4.24e-09 | 6 |
pericyte cell | 1.59e-08 | 4 |
GAG secreting cell | 4.31e-08 | 9 |
carbohydrate secreting cell | 4.31e-08 | 9 |
bone marrow cell | 7.09e-08 | 10 |
nucleus pulposus cell of intervertebral disc | 7.18e-08 | 3 |
fibrocyte | 6.45e-07 | 3 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
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vasculature of organ | 5.32e-13 | 11 |
intervertebral cartilage | 4.90e-12 | 5 |
symphysis | 4.90e-12 | 5 |
nonsynovial joint | 4.90e-12 | 5 |
fibrous joint | 4.90e-12 | 5 |
cartilaginous joint | 4.90e-12 | 5 |
developing mesenchymal condensation | 4.90e-12 | 5 |
pre-cartilage condensation | 4.90e-12 | 5 |
cartilaginous condensation | 4.90e-12 | 5 |
cartilage element | 4.90e-12 | 5 |
Showing 1 to 10 of 29 entries