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MCL coexpression mm9:56

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Phase1 CAGE Peaks

 Short description
Mm9::chr10:18324783..18324789,-p@chr10:18324783..18324789
-
Mm9::chr10:21130385..21130393,-p@chr10:21130385..21130393
-
Mm9::chr10:59740287..59740290,+p6@Psap
Mm9::chr10:77774760..77774775,-p@chr10:77774760..77774775
-
Mm9::chr10:8623763..8623773,+p@chr10:8623763..8623773
+
Mm9::chr11:106349732..106349749,-p@chr11:106349732..106349749
-
Mm9::chr11:116393200..116393210,+p9@Sphk1
Mm9::chr11:4138110..4138119,+p@chr11:4138110..4138119
+
Mm9::chr11:69697783..69697792,+p@chr11:69697783..69697792
+
Mm9::chr11:78798449..78798459,-p3@Lgals9
Mm9::chr11:97668125..97668129,+p17@Lasp1
Mm9::chr12:109544201..109544213,+p3@Hhipl1
Mm9::chr12:110073996..110074002,-p5@Slc25a29
Mm9::chr12:110124009..110124018,-p@chr12:110124009..110124018
-
Mm9::chr12:110124093..110124101,-p@chr12:110124093..110124101
-
Mm9::chr12:111517438..111517441,+p1@Dio3
Mm9::chr12:112687750..112687776,+p8@Tnfaip2
Mm9::chr12:113345503..113345513,+p@chr12:113345503..113345513
+
Mm9::chr12:113348823..113348830,+p@chr12:113348823..113348830
+
Mm9::chr12:113827436..113827477,+p@chr12:113827436..113827477
+
Mm9::chr12:25392676..25392689,+p7@Rrm2
Mm9::chr12:35399411..35399433,-p@chr12:35399411..35399433
-
Mm9::chr12:40701620..40701624,-p@chr12:40701620..40701624
-
Mm9::chr12:76409049..76409066,+p7@Rhoj
Mm9::chr12:8339007..8339020,+p@chr12:8339007..8339020
+
Mm9::chr12:8339024..8339034,+p@chr12:8339024..8339034
+
Mm9::chr13:12892344..12892348,-p1@Prl2c3
p1@Prl2c4
Mm9::chr13:13097658..13097661,-p1@Prl2c2
Mm9::chr13:13123243..13123246,+p@chr13:13123243..13123246
+
Mm9::chr13:27186057..27186060,+p1@Prl3d1
Mm9::chr13:27404479..27404496,+p1@Prl6a1
Mm9::chr13:27434787..27434799,-p@chr13:27434787..27434799
-
Mm9::chr13:27437530..27437548,+p1@Prl8a2
Mm9::chr13:27437553..27437554,+p3@Prl8a2
Mm9::chr13:27437563..27437570,+p2@Prl8a2
Mm9::chr13:27440741..27440750,+p@chr13:27440741..27440750
+
Mm9::chr13:27440876..27440882,+p@chr13:27440876..27440882
+
Mm9::chr13:27445983..27445989,+p@chr13:27445983..27445989
+
Mm9::chr13:27445995..27446000,+p@chr13:27445995..27446000
+
Mm9::chr13:27729434..27729460,+p@chr13:27729434..27729460
+
Mm9::chr13:27732678..27732685,-p@chr13:27732678..27732685
-
Mm9::chr13:27734346..27734351,-p2@Prl7a1
Mm9::chr13:27734353..27734368,-p1@Prl7a1
Mm9::chr13:27734440..27734445,-p3@Prl7a1
Mm9::chr13:27785192..27785201,-p@chr13:27785192..27785201
-
Mm9::chr13:28108079..28108084,+p1@Prl4a1
Mm9::chr13:43250181..43250190,-p@chr13:43250181..43250190
-
Mm9::chr13:56458550..56458566,-p@chr13:56458550..56458566
-
Mm9::chr13:60965734..60965798,-p1@4930486L24Rik
Mm9::chr13:61356706..61356711,-p1@Cts8
Mm9::chr13:61459554..61459559,-p1@Cts7
Mm9::chr14:14765101..14765107,+p1@ENSMUST00000159275
p1@uc007sgd.1
Mm9::chr14:31692502..31692513,+p2@Mustn1
Mm9::chr14:31692719..31692735,+p1@Mustn1
Mm9::chr14:32988838..32988840,+p@chr14:32988838..32988840
+
Mm9::chr14:68411446..68411456,+p@chr14:68411446..68411456
+
Mm9::chr14:68430254..68430261,+p@chr14:68430254..68430261
+
Mm9::chr15:35842946..35842947,-p@chr15:35842946..35842947
-
Mm9::chr15:78342035..78342046,-p@chr15:78342035..78342046
-
Mm9::chr15:79177038..79177047,+p@chr15:79177038..79177047
+
Mm9::chr15:81606702..81606709,+p7@Zc3h7b
Mm9::chr15:95631089..95631097,+p@chr15:95631089..95631097
+
Mm9::chr15:95631126..95631138,+p@chr15:95631126..95631138
+
Mm9::chr16:20316875..20316878,-p@chr16:20316875..20316878
-
Mm9::chr16:20412869..20412872,-p@chr16:20412869..20412872
-
Mm9::chr16:45887600..45887643,-p@chr16:45887600..45887643
-
Mm9::chr16:90831374..90831395,+p1@4931408A02Rik
Mm9::chr16:90831460..90831469,+p5@4931408A02Rik
Mm9::chr16:90846874..90846876,+p3@4931408A02Rik
Mm9::chr16:92596358..92596371,-p@chr16:92596358..92596371
-
Mm9::chr16:92596391..92596400,-p@chr16:92596391..92596400
-
Mm9::chr16:92613000..92613021,+p1@ENSMUST00000148919
Mm9::chr16:92613101..92613124,+p2@ENSMUST00000148919
Mm9::chr16:95920396..95920402,+p@chr16:95920396..95920402
+
Mm9::chr17:29601992..29602002,+p@chr17:29601992..29602002
+
Mm9::chr17:35991777..35991786,+p@chr17:35991777..35991786
+
Mm9::chr17:35991831..35991837,+p@chr17:35991831..35991837
+
Mm9::chr17:46419431..46419442,-p5@Tjap1
Mm9::chr17:47922678..47922688,+p10@Tfeb
Mm9::chr17:8180102..8180104,-p@chr17:8180102..8180104
-
Mm9::chr18:36502582..36502587,+p@chr18:36502582..36502587
+
Mm9::chr18:36502598..36502604,+p@chr18:36502598..36502604
+
Mm9::chr18:64851811..64851817,-p@chr18:64851811..64851817
-
Mm9::chr18:64859703..64859710,-p@chr18:64859703..64859710
-
Mm9::chr18:75120906..75120922,-p1@Lipg
Mm9::chr18:77193634..77193645,+p@chr18:77193634..77193645
+
Mm9::chr19:10722716..10722723,+p@chr19:10722716..10722723
+
Mm9::chr19:27387460..27387465,+p@chr19:27387460..27387465
+
Mm9::chr19:27396249..27396253,+p@chr19:27396249..27396253
+
Mm9::chr19:42313103..42313114,+p@chr19:42313103..42313114
+
Mm9::chr19:53214998..53215015,+p4@Add3
Mm9::chr19:55292056..55292067,-p3@Gucy2g
Mm9::chr1:137376532..137376546,-p@chr1:137376532..137376546
-
Mm9::chr1:63260800..63260818,-p1@Gpr1
Mm9::chr1:63260821..63260838,-p2@Gpr1
Mm9::chr1:63260849..63260860,-p4@Gpr1
Mm9::chr2:105003138..105003155,+p13@Wt1
Mm9::chr2:122426143..122426153,-p@chr2:122426143..122426153
-
Mm9::chr2:131679439..131679489,-p@chr2:131679439..131679489
-
Mm9::chr2:131680192..131680203,-p@chr2:131680192..131680203
-
Mm9::chr2:131680764..131680803,-p@chr2:131680764..131680803
-
Mm9::chr2:131680870..131680891,-p@chr2:131680870..131680891
-
Mm9::chr2:131681104..131681114,+p@chr2:131681104..131681114
+
Mm9::chr2:131681125..131681134,-p@chr2:131681125..131681134
-
Mm9::chr2:131681149..131681176,-p@chr2:131681149..131681176
-
Mm9::chr2:131681188..131681226,-p@chr2:131681188..131681226
-
Mm9::chr2:131681267..131681280,-p@chr2:131681267..131681280
-
Mm9::chr2:131681357..131681366,-p@chr2:131681357..131681366
-
Mm9::chr2:131681543..131681554,-p@chr2:131681543..131681554
-
Mm9::chr2:131681565..131681576,-p@chr2:131681565..131681576
-
Mm9::chr2:131682279..131682289,+p@chr2:131682279..131682289
+
Mm9::chr2:131685475..131685491,-p1@Erv3
Mm9::chr2:131685562..131685563,-p2@Erv3
Mm9::chr2:131736434..131736437,-p@chr2:131736434..131736437
-
Mm9::chr2:155576935..155577020,+p1@Procr
Mm9::chr2:155577060..155577071,+p2@Procr
Mm9::chr2:155577076..155577106,+p4@Procr
Mm9::chr2:166407469..166407519,-p4@Prex1
Mm9::chr2:167813767..167813791,-p@chr2:167813767..167813791
-
Mm9::chr2:169512387..169512392,-p@chr2:169512387..169512392
-
Mm9::chr2:35288301..35288317,-p11@Ggta1
Mm9::chr2:35288345..35288356,-p14@Ggta1
Mm9::chr2:84309658..84309661,-p@chr2:84309658..84309661
-
Mm9::chr2:84314151..84314165,-p2@Tfpi
Mm9::chr2:84314747..84314757,-p7@Tfpi
Mm9::chr3:122687190..122687214,-p2@Usp53
Mm9::chr3:122743969..122743971,-p@chr3:122743969..122743971
-
Mm9::chr3:41227385..41227390,-p@chr3:41227385..41227390
-
Mm9::chr3:41368843..41368855,+p6@Phf17
Mm9::chr3:41368919..41368930,+p7@Phf17
Mm9::chr3:69400213..69400216,-p@chr3:69400213..69400216
-
Mm9::chr3:89171538..89171544,+p@chr3:89171538..89171544
+
Mm9::chr3:90405695..90405731,+p@chr3:90405695..90405731
+
Mm9::chr3:95303813..95303818,+p@chr3:95303813..95303818
+
Mm9::chr3:98618357..98618372,-p1@Hsd3b6
Mm9::chr4:107110285..107110290,-p@chr4:107110285..107110290
-
Mm9::chr4:128938638..128938650,-p8@C77080
Mm9::chr4:132167076..132167081,+p@chr4:132167076..132167081
+
Mm9::chr4:138761115..138761123,+p@chr4:138761115..138761123
+
Mm9::chr4:140462693..140462700,-p@chr4:140462693..140462700
-
Mm9::chr4:35105498..35105509,-p@chr4:35105498..35105509
-
Mm9::chr4:57314347..57314382,-p4@Ptpn3
Mm9::chr4:98369139..98369162,-p@chr4:98369139..98369162
-
Mm9::chr4:99645534..99645538,-p@chr4:99645534..99645538
-
Mm9::chr5:112904886..112904895,-p6@Sez6l
Mm9::chr5:112905373..112905419,+p@chr5:112905373..112905419
+
Mm9::chr5:114000696..114000709,+p5@Wscd2
Mm9::chr5:114000724..114000741,+p4@Wscd2
Mm9::chr5:114862554..114862564,+p@chr5:114862554..114862564
+
Mm9::chr5:143577021..143577040,-p@chr5:143577021..143577040
-
Mm9::chr5:148949686..148949687,+p@chr5:148949686..148949687
+
Mm9::chr6:109824946..109824951,+p@chr6:109824946..109824951
+
Mm9::chr6:116364062..116364071,-p3@Alox5
Mm9::chr6:121292578..121292603,+p7@Slc6a12
Mm9::chr6:121306419..121306434,+p10@Slc6a12
Mm9::chr6:121306807..121306834,+p3@Slc6a12
Mm9::chr6:121306836..121306865,+p4@Slc6a12
Mm9::chr6:121306890..121306895,+p11@Slc6a12
Mm9::chr6:121306897..121306910,+p8@Slc6a12
Mm9::chr6:121306916..121306921,+p12@Slc6a12
Mm9::chr6:121306941..121306944,+p13@Slc6a12
Mm9::chr6:121313700..121313740,+p@chr6:121313700..121313740
+
Mm9::chr6:121315216..121315245,+p@chr6:121315216..121315245
+
Mm9::chr6:121586236..121586255,+p1@A2m
Mm9::chr6:121588306..121588317,+p@chr6:121588306..121588317
+
Mm9::chr6:121591352..121591370,+p@chr6:121591352..121591370
+
Mm9::chr6:121594914..121594945,+p@chr6:121594914..121594945
+
Mm9::chr6:122444228..122444231,-p@chr6:122444228..122444231
-
Mm9::chr6:122448778..122448784,-p@chr6:122448778..122448784
-
Mm9::chr6:137512093..137512098,-p@chr6:137512093..137512098
-
Mm9::chr6:48854959..48854972,+p6@Abp1
Mm9::chr6:48854978..48854990,+p2@Abp1
Mm9::chr6:48855132..48855142,+p11@Abp1
Mm9::chr6:48856155..48856166,+p@chr6:48856155..48856166
+
Mm9::chr6:48857675..48857680,+p10@Abp1
Mm9::chr6:48857706..48857715,+p7@Abp1
Mm9::chr6:48857727..48857754,+p3@Abp1
Mm9::chr6:48857796..48857805,+p8@Abp1
Mm9::chr6:48857811..48857820,+p9@Abp1
Mm9::chr6:48858834..48858844,+p@chr6:48858834..48858844
+
Mm9::chr6:48858846..48858868,+p@chr6:48858846..48858868
+
Mm9::chr6:48879890..48879896,+p1@1600015I10Rik
Mm9::chr6:97528087..97528119,-p@chr6:97528087..97528119
-
Mm9::chr6:97777247..97777258,+p@chr6:97777247..97777258
+
Mm9::chr6:97777273..97777296,+p@chr6:97777273..97777296
+
Mm9::chr6:97830509..97830513,+p@chr6:97830509..97830513
+
Mm9::chr7:109591246..109591266,+p@chr7:109591246..109591266
+
Mm9::chr7:109630203..109630210,-p@chr7:109630203..109630210
-
Mm9::chr7:112702892..112703001,+p1@Smpd1
Mm9::chr7:117431742..117431750,-p@chr7:117431742..117431750
-
Mm9::chr7:117916246..117916268,+p3@Ampd3
Mm9::chr7:117916276..117916281,+p23@Ampd3
Mm9::chr7:117916296..117916307,+p16@Ampd3
Mm9::chr7:128180180..128180187,+p@chr7:128180180..128180187
+
Mm9::chr7:128233450..128233453,+p@chr7:128233450..128233453
+
Mm9::chr7:128233454..128233457,+p@chr7:128233454..128233457
+
Mm9::chr7:134287849..134287865,-p@chr7:134287849..134287865
-
Mm9::chr7:138005328..138005341,+p@chr7:138005328..138005341
+
Mm9::chr7:138079674..138079685,+p3@Htra1
Mm9::chr7:138079686..138079768,+p1@Htra1
Mm9::chr7:138079771..138079782,+p2@Htra1
Mm9::chr7:149674900..149674912,+p20@Lsp1
Mm9::chr7:149674944..149674973,+p7@Lsp1
Mm9::chr7:149675081..149675100,+p@chr7:149675081..149675100
+
Mm9::chr7:149675205..149675233,+p9@Lsp1
Mm9::chr7:150952821..150952833,-p1@Mrgprg
Mm9::chr7:150952861..150952867,-p4@Mrgprg
Mm9::chr7:150952890..150952901,-p2@Mrgprg
Mm9::chr7:150952911..150952917,-p3@Mrgprg
Mm9::chr7:17307303..17307308,+p1@Ceacam9
Mm9::chr7:19303548..19303561,+p1@Psg22
Mm9::chr7:51187042..51187049,+p@chr7:51187042..51187049
+
Mm9::chr7:52444070..52444083,-p@chr7:52444070..52444083
-
Mm9::chr7:52444924..52444936,-p@chr7:52444924..52444936
-
Mm9::chr7:52445017..52445020,-p@chr7:52445017..52445020
-
Mm9::chr7:52445041..52445083,-p@chr7:52445041..52445083
-
Mm9::chr7:56138705..56138713,-p@chr7:56138705..56138713
-
Mm9::chr7:56140179..56140186,+p@chr7:56140179..56140186
+
Mm9::chr7:56142436..56142460,-p@chr7:56142436..56142460
-
Mm9::chr7:78864103..78864107,-p@chr7:78864103..78864107
-
Mm9::chr8:109027975..109027978,+p@chr8:109027975..109027978
+
Mm9::chr8:119592059..119592107,-p@chr8:119592059..119592107
-
Mm9::chr8:119619759..119619775,+p1@Bcmo1
Mm9::chr8:119934552..119934554,+p@chr8:119934552..119934554
+
Mm9::chr8:15726533..15726536,+p@chr8:15726533..15726536
+
Mm9::chr8:15726600..15726608,+p@chr8:15726600..15726608
+
Mm9::chr8:26316320..26316331,-p@chr8:26316320..26316331
-
Mm9::chr8:58953213..58953222,-p@chr8:58953213..58953222
-
Mm9::chr8:84385577..84385585,+p@chr8:84385577..84385585
+
Mm9::chr8:95484926..95484943,+p1@Slc6a2
Mm9::chr9:36239407..36239421,+p1@Gm7257
Mm9::chr9:36239429..36239438,+p2@Gm7257
Mm9::chr9:36283165..36283170,+p1@Gm9513
Mm9::chr9:36289474..36289477,+p@chr9:36289474..36289477
+
Mm9::chr9:40297262..40297271,-p@chr9:40297262..40297271
-
Mm9::chr9:40297312..40297323,-p@chr9:40297312..40297323
-
Mm9::chr9:40297334..40297345,-p@chr9:40297334..40297345
-
Mm9::chr9:40297346..40297350,-p@chr9:40297346..40297350
-
Mm9::chr9:40338947..40338975,-p7@Gramd1b
Mm9::chr9:45587692..45587719,-p@chr9:45587692..45587719
-
Mm9::chr9:96665991..96665999,+p1@uc009rct.1
Mm9::chrX:147480674..147480686,+p9@Fgd1
Mm9::chrX:50467732..50467743,-p5@Plac1
Mm9::chrX:51027816..51027821,+p2@4930502E18Rik
Mm9::chrX:51028013..51028021,+p3@4930502E18Rik
Mm9::chrX:58962772..58962795,+p1@Ldoc1


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0005179hormone activity3.53735630712569e-05
GO:0016728oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor0.00479577617603402
GO:0004748ribonucleoside-diphosphate reductase activity0.00479577617603402
GO:0004217cathepsin L activity0.00717974037254331
GO:0016725oxidoreductase activity, acting on CH or CH2 groups0.00955446164434195



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.11.09488e-11
MA0004.10.263666
MA0006.18.94632e-05
MA0007.10.29731
MA0009.10.18708
MA0014.19.02927e-11
MA0017.10.0914337
MA0019.10.387291
MA0024.10.0184296
MA0025.10.0362672
MA0027.11.04919
MA0028.11.45825e-05
MA0029.10.369646
MA0030.10.822386
MA0031.10.681087
MA0038.10.45814
MA0040.10.574336
MA0041.10.167418
MA0042.10.13278
MA0043.10.166597
MA0046.10.111883
MA0048.10.000962903
MA0050.10.0294784
MA0051.10.0470719
MA0052.10.38015
MA0055.10.571416
MA0056.10
MA0057.10.00895289
MA0058.10.486964
MA0059.10.45697
MA0060.10.00023593
MA0061.10.178554
MA0063.10
MA0066.11.39795
MA0067.10.0676488
MA0068.10.000145728
MA0069.10.598943
MA0070.13.24235
MA0071.10.410313
MA0072.10.190559
MA0073.12.31684e-11
MA0074.10.411469
MA0076.18.57959e-05
MA0077.10.164049
MA0078.10.327797
MA0081.11.06181
MA0083.10.165801
MA0084.10.228074
MA0087.10.451371
MA0088.10.0390718
MA0089.10
MA0090.12.54918
MA0091.10.310317
MA0092.10.312353
MA0093.10.265888
MA0095.10
MA0098.10
MA0100.10.261073
MA0101.10.2353
MA0103.10.161034
MA0105.10.124084
MA0106.11.64774
MA0107.10.414999
MA0108.22.83329
MA0109.10
MA0111.10.0912965
MA0113.10.926245
MA0114.10.127949
MA0115.10.564877
MA0116.10.0993102
MA0117.10.0503976
MA0119.10.0515882
MA0122.10.808877
MA0124.10.423988
MA0125.10.899421
MA0130.10
MA0131.10.0759722
MA0132.10
MA0133.10
MA0135.10.0805754
MA0136.10.164429
MA0139.16.18688e-05
MA0140.10.260745
MA0141.10.722002
MA0142.10.15814
MA0143.10.12593
MA0144.11.59181
MA0145.10.0178553
MA0146.11.81776e-14
MA0147.10.0045743
MA0148.10.105069
MA0149.184.7251
MA0062.28.15851e-07
MA0035.21.51495
MA0039.25.44715e-07
MA0138.20.0104584
MA0002.22.94377
MA0137.21.31704
MA0104.29.23462e-05
MA0047.20.0410191
MA0112.20.596908
MA0065.20.0248623
MA0150.14.1939
MA0151.10
MA0152.10.794307
MA0153.10.429078
MA0154.10.639095
MA0155.10.0482664
MA0156.10.0945684
MA0157.10.719036
MA0158.10
MA0159.10.450287
MA0160.11.50113
MA0161.10
MA0162.13.55591e-12
MA0163.12.71797e-06
MA0164.10.165117
MA0080.20.196936
MA0018.20.113833
MA0099.25.98542
MA0079.20
MA0102.20.725005
MA0258.11.28336
MA0259.10.00920651
MA0442.10
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