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MCL coexpression mm9:67

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Phase1 CAGE Peaks

 Short description
Mm9::chr10:116685037..116685048,+p@chr10:116685037..116685048
+
Mm9::chr10:116714486..116714508,-p@chr10:116714486..116714508
-
Mm9::chr10:116714720..116714745,-p@chr10:116714720..116714745
-
Mm9::chr10:116714809..116714859,-p@chr10:116714809..116714859
-
Mm9::chr10:116714942..116714986,-p@chr10:116714942..116714986
-
Mm9::chr10:116715054..116715061,-p@chr10:116715054..116715061
-
Mm9::chr10:116715083..116715118,-p@chr10:116715083..116715118
-
Mm9::chr10:116715155..116715176,-p@chr10:116715155..116715176
-
Mm9::chr10:116715229..116715252,-p@chr10:116715229..116715252
-
Mm9::chr10:116717723..116717760,-p@chr10:116717723..116717760
-
Mm9::chr10:116717791..116717822,-p@chr10:116717791..116717822
-
Mm9::chr10:116719299..116719313,-p2@Lyz2
Mm9::chr10:122258231..122258235,+p@chr10:122258231..122258235
+
Mm9::chr10:51215823..51215844,+p@chr10:51215823..51215844
+
Mm9::chr10:59742551..59742555,+p@chr10:59742551..59742555
+
Mm9::chr10:59760443..59760447,+p@chr10:59760443..59760447
+
Mm9::chr11:102297834..102297848,+p@chr11:102297834..102297848
+
Mm9::chr11:118254834..118254851,-p@chr11:118254834..118254851
-
Mm9::chr11:19482831..19482837,+p@chr11:19482831..19482837
+
Mm9::chr11:4733117..4733126,-p11@Nf2
Mm9::chr11:48715606..48715630,-p2@Gm5431
Mm9::chr11:48715653..48715703,-p1@Gm5431
Mm9::chr11:67400111..67400120,+p12@Gas7
Mm9::chr11:68310186..68310205,+p@chr11:68310186..68310205
+
Mm9::chr11:69479338..69479345,-p@chr11:69479338..69479345
-
Mm9::chr11:70268058..70268063,-p@chr11:70268058..70268063
-
Mm9::chr11:73203601..73203603,+p@chr11:73203601..73203603
+
Mm9::chr11:82765564..82765596,+p2@Slfn5
Mm9::chr11:82883248..82883252,+p@chr11:82883248..82883252
+
Mm9::chr11:83388559..83388570,-p@chr11:83388559..83388570
-
Mm9::chr11:83462030..83462033,+p@chr11:83462030..83462033
+
Mm9::chr11:88785582..88785590,-p@chr11:88785582..88785590
-
Mm9::chr12:103677300..103677309,-p@chr12:103677300..103677309
-
Mm9::chr12:103678033..103678046,-p4@Lgmn
Mm9::chr12:103982202..103982218,+p4@D230037D09Rik
Mm9::chr12:104681863..104681883,-p1@Ifi27l2a
Mm9::chr12:113998930..113998953,+p2@Pld4
Mm9::chr13:103483676..103483687,+p2@Cd180
Mm9::chr13:103510864..103510868,+p@chr13:103510864..103510868
+
Mm9::chr13:12708349..12708352,-p@chr13:12708349..12708352
-
Mm9::chr13:13485792..13485828,-p1@Gpr137b
Mm9::chr13:13485859..13485864,-p4@Gpr137b
Mm9::chr13:37870253..37870272,+p13@Rreb1
Mm9::chr13:37870281..37870293,+p10@Rreb1
Mm9::chr13:51830013..51830036,-p6@Sema4d
Mm9::chr13:94943950..94943982,+p3@Lhfpl2
Mm9::chr14:31973812..31973825,-p@chr14:31973812..31973825
-
Mm9::chr14:32979290..32979309,+p3@Gm6768
p3@Ncoa4
Mm9::chr14:33599190..33599209,+p1@1810011H11Rik
Mm9::chr14:61928643..61928650,+p2@Arl11
Mm9::chr14:63741343..63741362,+p1@Ctsb
Mm9::chr14:63744321..63744326,+p@chr14:63744321..63744326
+
Mm9::chr14:63754442..63754480,+p@chr14:63754442..63754480
+
Mm9::chr14:63757184..63757197,+p@chr14:63757184..63757197
+
Mm9::chr14:63757252..63757271,-p@chr14:63757252..63757271
-
Mm9::chr14:63760597..63760618,+p@chr14:63760597..63760618
+
Mm9::chr14:63760626..63760672,+p@chr14:63760626..63760672
+
Mm9::chr14:63761120..63761134,+p@chr14:63761120..63761134
+
Mm9::chr14:63761148..63761177,+p@chr14:63761148..63761177
+
Mm9::chr14:63761194..63761212,+p@chr14:63761194..63761212
+
Mm9::chr14:63761239..63761277,+p@chr14:63761239..63761277
+
Mm9::chr14:63761420..63761486,+p@chr14:63761420..63761486
+
Mm9::chr14:63761498..63761539,+p@chr14:63761498..63761539
+
Mm9::chr14:63761543..63761587,+p@chr14:63761543..63761587
+
Mm9::chr14:63762481..63762497,+p@chr14:63762481..63762497
+
Mm9::chr14:73572700..73572716,+p@chr14:73572700..73572716
+
Mm9::chr15:101966696..101966702,+p@chr15:101966696..101966702
+
Mm9::chr15:6519521..6519553,+p@chr15:6519521..6519553
+
Mm9::chr15:78156474..78156489,+p2@Csf2rb
Mm9::chr16:8624020..8624026,-p1@ENSMUST00000118361
Mm9::chr17:24916729..24916744,+p@chr17:24916729..24916744
+
Mm9::chr17:34068106..34068146,+p3@Rgl2
Mm9::chr17:35185413..35185428,-p@chr17:35185413..35185428
-
Mm9::chr17:35309522..35309544,-p3@Aif1
Mm9::chr17:47532329..47532340,-p@chr17:47532329..47532340
-
Mm9::chr17:66355009..66355022,+p@chr17:66355009..66355022
+
Mm9::chr18:36886246..36886269,-p1@Cd14
Mm9::chr18:36886322..36886345,-p2@Cd14
Mm9::chr18:53405272..53405288,+p3@Snx24
Mm9::chr18:61265498..61265544,+p1@Csf1r
Mm9::chr18:61265559..61265564,+p3@Csf1r
Mm9::chr19:10057338..10057342,+p2@Fth1
Mm9::chr19:10057578..10057608,+p@chr19:10057578..10057608
+
Mm9::chr19:10059047..10059073,+p@chr19:10059047..10059073
+
Mm9::chr19:11410542..11410559,-p2@Ms4a7
Mm9::chr19:11410564..11410577,-p3@Ms4a7
Mm9::chr19:11410597..11410614,-p1@Ms4a7
Mm9::chr19:11449978..11450018,+p@chr19:11449978..11450018
+
Mm9::chr19:11450027..11450044,+p@chr19:11450027..11450044
+
Mm9::chr19:12535239..12535273,+p1@Mpeg1
Mm9::chr19:12535522..12535533,+p@chr19:12535522..12535533
+
Mm9::chr19:12535579..12535591,+p@chr19:12535579..12535591
+
Mm9::chr19:12535600..12535650,+p@chr19:12535600..12535650
+
Mm9::chr19:12535662..12535673,+p@chr19:12535662..12535673
+
Mm9::chr19:12539392..12539396,+p@chr19:12539392..12539396
+
Mm9::chr19:17401449..17401453,-p@chr19:17401449..17401453
-
Mm9::chr19:3898848..3898854,-p5@Tcirg1
Mm9::chr19:9077615..9077626,+p@chr19:9077615..9077626
+
Mm9::chr1:130485932..130485944,-p@chr1:130485932..130485944
-
Mm9::chr1:133585348..133585361,+p2@5430435G22Rik
Mm9::chr1:136302911..136302934,+p3@Cyb5r1
Mm9::chr1:136328572..136328601,+p@chr1:136328572..136328601
+
Mm9::chr1:158360163..158360167,-p@chr1:158360163..158360167
-
Mm9::chr1:158604421..158604475,-p1@Tor3a
Mm9::chr1:173159866..173159877,-p@chr1:173159866..173159877
-
Mm9::chr1:173164773..173164781,-p3@Fcer1g
Mm9::chr1:173769825..173769830,+p5@Cd84
Mm9::chr1:62750490..62750508,+p8@Nrp2
Mm9::chr1:6443899..6443911,+p@chr1:6443899..6443911
+
Mm9::chr1:97565062..97565065,+p@chr1:97565062..97565065
+
Mm9::chr2:128845420..128845423,-p@chr2:128845420..128845423
-
Mm9::chr2:91043060..91043091,+p1@Acp2
Mm9::chr3:122563187..122563188,+p@chr3:122563187..122563188
+
Mm9::chr3:145812793..145812807,+p4@Mcoln2
Mm9::chr3:61168714..61168729,+p3@Rap2b
Mm9::chr3:61170439..61170444,+p@chr3:61170439..61170444
+
Mm9::chr3:79335680..79335706,-p@chr3:79335680..79335706
-
Mm9::chr3:79335715..79335726,-p@chr3:79335715..79335726
-
Mm9::chr3:85516241..85516242,+p@chr3:85516241..85516242
+
Mm9::chr3:95330699..95330719,+p2@Ctss
Mm9::chr3:95330722..95330733,+p3@Ctss
Mm9::chr3:95330741..95330793,+p1@Ctss
Mm9::chr3:95349443..95349463,+p@chr3:95349443..95349463
+
Mm9::chr3:95350717..95350726,+p@chr3:95350717..95350726
+
Mm9::chr3:95353970..95353982,+p@chr3:95353970..95353982
+
Mm9::chr4:130378637..130378641,+p@chr4:130378637..130378641
+
Mm9::chr4:132119966..132119991,+p2@Ptafr
Mm9::chr4:132119997..132120008,+p3@Ptafr
Mm9::chr4:133683713..133683726,-p@chr4:133683713..133683726
-
Mm9::chr4:133683866..133683888,-p@chr4:133683866..133683888
-
Mm9::chr4:138847516..138847537,+p@chr4:138847516..138847537
+
Mm9::chr4:149944185..149944206,-p@chr4:149944185..149944206
-
Mm9::chr4:149944309..149944330,+p@chr4:149944309..149944330
+
Mm9::chr4:19635686..19635689,-p@chr4:19635686..19635689
-
Mm9::chr4:43467436..43467448,-p2@Cd72
p2@LOC100504743
Mm9::chr4:66488769..66488800,+p2@Tlr4
Mm9::chr4:66488806..66488827,+p4@Tlr4
Mm9::chr4:93001523..93001536,+p@chr4:93001523..93001536
+
Mm9::chr4:98907215..98907238,+p@chr4:98907215..98907238
+
Mm9::chr5:101148682..101148693,-p2@Hpse
Mm9::chr5:148404049..148404050,-p@chr5:148404049..148404050
-
Mm9::chr5:34886026..34886078,+p3@Sh3bp2
Mm9::chr5:36391304..36391309,+p@chr5:36391304..36391309
+
Mm9::chr6:116623789..116623807,-p2@Rassf4
Mm9::chr6:116623808..116623871,-p1@Rassf4
Mm9::chr6:121293403..121293432,+p9@Slc6a12
Mm9::chr6:122527813..122527820,+p@chr6:122527813..122527820
+
Mm9::chr6:122552331..122552362,-p2@Apobec1
Mm9::chr6:122552363..122552418,-p1@Apobec1
Mm9::chr6:122552422..122552440,-p3@Apobec1
Mm9::chr6:122798625..122798629,-p@chr6:122798625..122798629
-
Mm9::chr6:122806040..122806076,-p2@C3ar1
Mm9::chr6:122806086..122806107,-p1@C3ar1
Mm9::chr6:122806115..122806128,-p4@C3ar1
Mm9::chr6:122806169..122806181,-p3@C3ar1
Mm9::chr6:123217110..123217141,+p@chr6:123217110..123217141
+
Mm9::chr6:124758954..124758974,+p2@Spsb2
Mm9::chr6:125482610..125482621,+p3@Vwf
Mm9::chr6:137359267..137359293,+p6@Ptpro
Mm9::chr6:137359507..137359545,+p@chr6:137359507..137359545
+
Mm9::chr6:15677809..15677814,+p5@Mdfic
Mm9::chr6:34813130..34813183,+p1@Tmem140
Mm9::chr6:37755972..37755979,+p1@uc009bjh.1
Mm9::chr6:48989609..48989612,+p@chr6:48989609..48989612
+
Mm9::chr6:48993382..48993389,+p@chr6:48993382..48993389
+
Mm9::chr6:49773673..49773685,+p@chr6:49773673..49773685
+
Mm9::chr6:65094699..65094759,-p1@Hpgds
Mm9::chr6:72499726..72499757,+p4@Capg
Mm9::chr6:85248484..85248489,+p@chr6:85248484..85248489
+
Mm9::chr6:91634055..91634126,+p1@Slc6a6
Mm9::chr6:91634171..91634185,+p2@Slc6a6
Mm9::chr6:91705152..91705168,+p@chr6:91705152..91705168
+
Mm9::chr6:91708104..91708116,+p@chr6:91708104..91708116
+
Mm9::chr6:97757008..97757061,+p1@Mitf
Mm9::chr7:108993814..108993853,-p1@Folr2
Mm9::chr7:134040986..134040997,-p8@Tmem219
Mm9::chr7:135273050..135273088,+p1@Itgax
Mm9::chr7:26472283..26472298,-p@chr7:26472283..26472298
-
Mm9::chr7:29692313..29692318,-p11@Actn4
Mm9::chr7:29692368..29692386,-p5@Actn4
Mm9::chr7:31145621..31145622,+p@chr7:31145621..31145622
+
Mm9::chr7:31998362..31998369,+p@chr7:31998362..31998369
+
Mm9::chr7:4014728..4014741,-p3@Lair1
Mm9::chr7:4014757..4014790,-p1@Lair1
Mm9::chr7:4014797..4014812,-p2@Lair1
Mm9::chr7:4225757..4225765,+p1@Pira6
Mm9::chr8:108515614..108515633,-p1@Dpep2
Mm9::chr8:108515641..108515652,-p2@Dpep2
Mm9::chr8:40728023..40728027,-p1@Msr1
Mm9::chr8:74103162..74103199,+p6@Slc27a1
Mm9::chr8:74103205..74103219,+p15@Slc27a1
Mm9::chr8:74104328..74104345,+p11@Slc27a1
Mm9::chr9:107877953..107877962,+p7@Uba7
Mm9::chr9:108961730..108961773,-p1@Trex1
Mm9::chr9:37062966..37062977,-p3@Slc37a2
Mm9::chr9:45214018..45214092,+p8@Fxyd2
Mm9::chr9:7347404..7347410,+p1@Mmp12
Mm9::chrX:106302357..106302360,+p@chrX:106302357..106302360
+
Mm9::chrX:131135467..131135504,-p1@Gla
Mm9::chrX:163645262..163645275,-p@chrX:163645262..163645275
-
Mm9::chrX:163645891..163645899,-p@chrX:163645891..163645899
-
Mm9::chrX:163702149..163702198,-p1@Tlr8
Mm9::chrX:163768413..163768435,-p2@Tlr7
Mm9::chrX:163768441..163768511,-p1@Tlr7
Mm9::chrX:71526951..71526994,-p1@Dnase1l1


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data




Relative expression of the co-expression cluster over median <br>Analyst:





Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>



TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data


Novel motifs




JASPAR motifs