FFCP PHASE1:Mm9::chr16:78576894..78576911,-: Difference between revisions
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|id=chr16:78576894..78576911,- | |id=chr16:78576894..78576911,- | ||
|ontology_enrichment_celltype=CL:0000838!1.15e-08!12;CL:0000542!1.48e-08!13;CL:0000051!1.48e-08!13;CL:0000084!3.63e-08!11;CL:0000827!3.63e-08!11;CL:0000791!2.08e-07!9;CL:0000789!2.08e-07!9;CL:0002420!2.08e-07!9;CL:0002419!2.08e-07!9;CL:0000790!2.08e-07!9;CL:0000988!3.75e-07!32;CL:0002032!3.75e-07!32;CL:0000037!3.75e-07!32;CL:0000566!3.75e-07!32;CL:0000837!3.75e-07!32 | |ontology_enrichment_celltype=CL:0000838!1.15e-08!12;CL:0000542!1.48e-08!13;CL:0000051!1.48e-08!13;CL:0000084!3.63e-08!11;CL:0000827!3.63e-08!11;CL:0000791!2.08e-07!9;CL:0000789!2.08e-07!9;CL:0002420!2.08e-07!9;CL:0002419!2.08e-07!9;CL:0000790!2.08e-07!9;CL:0000988!3.75e-07!32;CL:0002032!3.75e-07!32;CL:0000037!3.75e-07!32;CL:0000566!3.75e-07!32;CL:0000837!3.75e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.15e-08,12;CL:0000542,1.47e-08,13;CL:0000051,1.47e-08,13;CL:0000084,3.61e-08,11;CL:0000827,3.61e-08,11;CL:0000791,2.07e-07,9;CL:0000789,2.07e-07,9;CL:0002420,2.07e-07,9;CL:0002419,2.07e-07,9;CL:0000790,2.07e-07,9;CL:0000988,3.44e-07,32;CL:0002032,3.44e-07,32;CL:0000037,3.44e-07,32;CL:0000837,3.44e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!7.66e-14!41;UBERON:0006562!4.03e-13!24;UBERON:0001557!4.03e-13!24;UBERON:0001042!4.03e-13!24;UBERON:0008814!4.03e-13!24;UBERON:0009145!4.03e-13!24;UBERON:0001004!8.90e-13!42;UBERON:0002370!1.08e-12!23;UBERON:0000974!1.08e-12!23;UBERON:0004807!1.08e-12!23;UBERON:0005058!1.08e-12!23;UBERON:0003351!1.08e-12!23;UBERON:0009113!1.08e-12!23;UBERON:0003295!1.08e-12!23;UBERON:0009722!1.08e-12!23;UBERON:0005562!1.08e-12!23;UBERON:0007690!1.08e-12!23;UBERON:0000072!2.85e-12!27;UBERON:0003408!2.78e-11!24;UBERON:0004177!3.26e-11!29;UBERON:0002368!2.19e-09!60;UBERON:0005057!3.68e-09!51;UBERON:0002530!9.00e-09!65;UBERON:0000063!1.43e-08!35;UBERON:0002390!3.42e-08!45;UBERON:0003061!3.42e-08!45;UBERON:0002193!6.70e-08!48;UBERON:0002405!1.46e-07!70 | |ontology_enrichment_uberon=UBERON:0000065!7.66e-14!41;UBERON:0006562!4.03e-13!24;UBERON:0001557!4.03e-13!24;UBERON:0001042!4.03e-13!24;UBERON:0008814!4.03e-13!24;UBERON:0009145!4.03e-13!24;UBERON:0001004!8.90e-13!42;UBERON:0002370!1.08e-12!23;UBERON:0000974!1.08e-12!23;UBERON:0004807!1.08e-12!23;UBERON:0005058!1.08e-12!23;UBERON:0003351!1.08e-12!23;UBERON:0009113!1.08e-12!23;UBERON:0003295!1.08e-12!23;UBERON:0009722!1.08e-12!23;UBERON:0005562!1.08e-12!23;UBERON:0007690!1.08e-12!23;UBERON:0000072!2.85e-12!27;UBERON:0003408!2.78e-11!24;UBERON:0004177!3.26e-11!29;UBERON:0002368!2.19e-09!60;UBERON:0005057!3.68e-09!51;UBERON:0002530!9.00e-09!65;UBERON:0000063!1.43e-08!35;UBERON:0002390!3.42e-08!45;UBERON:0003061!3.42e-08!45;UBERON:0002193!6.70e-08!48;UBERON:0002405!1.46e-07!70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,7.59e-14,41;UBERON:0006562,3.99e-13,24;UBERON:0001557,3.99e-13,24;UBERON:0001042,3.99e-13,24;UBERON:0008814,3.99e-13,24;UBERON:0009145,3.99e-13,24;UBERON:0001004,9.30e-13,42;UBERON:0002370,1.08e-12,23;UBERON:0000974,1.08e-12,23;UBERON:0004807,1.08e-12,23;UBERON:0005058,1.08e-12,23;UBERON:0003351,1.08e-12,23;UBERON:0009113,1.08e-12,23;UBERON:0003295,1.08e-12,23;UBERON:0009722,1.08e-12,23;UBERON:0005562,1.08e-12,23;UBERON:0007690,1.08e-12,23;UBERON:0000072,2.83e-12,27;UBERON:0000077,4.68e-12,35;UBERON:0003408,2.94e-11,24;UBERON:0004177,3.23e-11,29;UBERON:0005057,3.23e-11,29;UBERON:0000153,1.66e-09,43;UBERON:0001041,1.71e-09,80;UBERON:0002368,2.03e-09,60;UBERON:0002530,8.67e-09,65;UBERON:0007811,1.33e-08,36;UBERON:0002390,3.33e-08,45;UBERON:0003061,3.33e-08,45;UBERON:0002193,6.55e-08,48;UBERON:0002405,6.55e-08,48 | |||
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| ||
|short_description=p1@D16Ertd472e | |short_description=p1@D16Ertd472e | ||
}} | }} |
Revision as of 11:30, 14 November 2012
Short description: | p1@D16Ertd472e |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_D16Ertd472e_5end |
Coexpression cluster: | MCL_coexpression_mm9:267 |
Association with transcript: | 0bp_to_ENSMUST00000114218, ENSMUST00000114219, ENSMUST00000114220, uc007zsr.2_5end |
EntrezGene: | D16Ertd472e |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.15e-08 | 12 |
lymphocyte | 1.47e-08 | 13 |
common lymphoid progenitor | 1.47e-08 | 13 |
T cell | 3.61e-08 | 11 |
pro-T cell | 3.61e-08 | 11 |
mature alpha-beta T cell | 2.07e-07 | 9 |
alpha-beta T cell | 2.07e-07 | 9 |
immature T cell | 2.07e-07 | 9 |
mature T cell | 2.07e-07 | 9 |
immature alpha-beta T cell | 2.07e-07 | 9 |
hematopoietic cell | 3.44e-07 | 32 |
hematopoietic oligopotent progenitor cell | 3.44e-07 | 32 |
hematopoietic stem cell | 3.44e-07 | 32 |
hematopoietic multipotent progenitor cell | 3.44e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
respiratory tract | 7.59e-14 | 41 |
pharynx | 3.99e-13 | 24 |
upper respiratory tract | 3.99e-13 | 24 |
chordate pharynx | 3.99e-13 | 24 |
pharyngeal arch system | 3.99e-13 | 24 |
pharyngeal region of foregut | 3.99e-13 | 24 |
respiratory system | 9.30e-13 | 42 |
thymus | 1.08e-12 | 23 |
neck | 1.08e-12 | 23 |
respiratory system epithelium | 1.08e-12 | 23 |
hemolymphoid system gland | 1.08e-12 | 23 |
pharyngeal epithelium | 1.08e-12 | 23 |
thymic region | 1.08e-12 | 23 |
pharyngeal gland | 1.08e-12 | 23 |
entire pharyngeal arch endoderm | 1.08e-12 | 23 |
thymus primordium | 1.08e-12 | 23 |
early pharyngeal endoderm | 1.08e-12 | 23 |
segment of respiratory tract | 2.83e-12 | 27 |
mixed endoderm/mesoderm-derived structure | 4.68e-12 | 35 |
gland of gut | 2.94e-11 | 24 |
hemopoietic organ | 3.23e-11 | 29 |
immune organ | 3.23e-11 | 29 |
anterior region of body | 1.66e-09 | 43 |
foregut | 1.71e-09 | 80 |
endocrine gland | 2.03e-09 | 60 |
gland | 8.67e-09 | 65 |
craniocervical region | 1.33e-08 | 36 |
hematopoietic system | 3.33e-08 | 45 |
blood island | 3.33e-08 | 45 |
hemolymphoid system | 6.55e-08 | 48 |
immune system | 6.55e-08 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.