FFCP PHASE1:Mm9::chr19:57193471..57193516,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr19:57193471..57193516,- | |id=chr19:57193471..57193516,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!3.61e-10!41;UBERON:0001004!5.00e-10!42;UBERON:0006562!1.11e-09!24;UBERON:0001557!1.11e-09!24;UBERON:0001042!1.11e-09!24;UBERON:0008814!1.11e-09!24;UBERON:0009145!1.11e-09!24;UBERON:0000153!1.75e-09!94;UBERON:0002370!2.95e-09!23;UBERON:0000974!2.95e-09!23;UBERON:0004807!2.95e-09!23;UBERON:0005058!2.95e-09!23;UBERON:0003351!2.95e-09!23;UBERON:0009113!2.95e-09!23;UBERON:0003295!2.95e-09!23;UBERON:0009722!2.95e-09!23;UBERON:0005562!2.95e-09!23;UBERON:0007690!2.95e-09!23;UBERON:0003408!5.27e-09!24;UBERON:0007811!2.61e-07!86;UBERON:0000072!3.71e-07!27;UBERON:0004177!7.41e-07!29 | |ontology_enrichment_uberon=UBERON:0000065!3.61e-10!41;UBERON:0001004!5.00e-10!42;UBERON:0006562!1.11e-09!24;UBERON:0001557!1.11e-09!24;UBERON:0001042!1.11e-09!24;UBERON:0008814!1.11e-09!24;UBERON:0009145!1.11e-09!24;UBERON:0000153!1.75e-09!94;UBERON:0002370!2.95e-09!23;UBERON:0000974!2.95e-09!23;UBERON:0004807!2.95e-09!23;UBERON:0005058!2.95e-09!23;UBERON:0003351!2.95e-09!23;UBERON:0009113!2.95e-09!23;UBERON:0003295!2.95e-09!23;UBERON:0009722!2.95e-09!23;UBERON:0005562!2.95e-09!23;UBERON:0007690!2.95e-09!23;UBERON:0003408!5.27e-09!24;UBERON:0007811!2.61e-07!86;UBERON:0000072!3.71e-07!27;UBERON:0004177!7.41e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,8.82e-13,43;UBERON:0007811,9.82e-11,36;UBERON:0000065,2.81e-10,41;UBERON:0001004,3.91e-10,42;UBERON:0006562,7.50e-10,24;UBERON:0001557,7.50e-10,24;UBERON:0001042,7.50e-10,24;UBERON:0008814,7.50e-10,24;UBERON:0009145,7.50e-10,24;UBERON:0002370,2.01e-09,23;UBERON:0000974,2.01e-09,23;UBERON:0004807,2.01e-09,23;UBERON:0005058,2.01e-09,23;UBERON:0003351,2.01e-09,23;UBERON:0009113,2.01e-09,23;UBERON:0003295,2.01e-09,23;UBERON:0009722,2.01e-09,23;UBERON:0005562,2.01e-09,23;UBERON:0007690,2.01e-09,23;UBERON:0003408,3.64e-09,24;UBERON:0000072,3.05e-07,27;UBERON:0000077,3.40e-07,35;UBERON:0004177,5.60e-07,29;UBERON:0005057,5.60e-07,29 | |||
|phase1_expression=13.4525031568027,0,0.454999239389536,0,0,1.00727563147134,0.233612640595526,45.3222865279933,36.745856481585,37.9184532641629,3.76679530096111,8.13676021752431,59.2354525561972,70.3734239472929,1.99865857089398,2.02475267389826,0.699561878128147,9.14840279538889,8.36398044995006,8.91218268775863,6.71841992193451,6.45391182805754,2.87319768052829,2.07990149631429,2.2940928106717,0,0.430761996159075,0.430942465371778,0.190023419456374,0,0.443461021310609,0,0,0,0,0.997407872150954,1.22501613757421,0,0,0,0,0,0,5.03587271902309,5.47435428585379,12.664725899156,1.56478268869608,3.70642765846759,3.95435128922049,3.30530828426282,4.05960622713551,0,8.38913030288682,79.7898356212479,89.064856772753,0.514518872071894,1.43266719969378,0,5.05791152148994,4.23192783417626,5.07065122804943,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.768436610643109,4.97710139080693,3.24014251996058,3.15487442027073,5.71301968807607,8.39300455616131,2.9397791811589,3.45043695665651,2.75765635983006,8.8092704799511,10.7257363991558,9.67721159514334,5.40733779693795,7.22752384459036,5.73004707612436,6.97957497503452,7.87867654044352,7.18151764551008,7.07108605136802,8.25755748634797,3.54158947068071,0.530083353332288,0,4.34796733052517,1.72084775396277,0,0,0,0,3.65155492342555,2.38602451609281,0.519572009205738,0.70667914902068,3.38024207464033,1.28326477414318,5.09610479413291,0,0.865964164044856,1.26679932737549,0,3.19714863213368,31.5904218049549,1.63286352971307,3.29622120855658,1.21786191324856,2.53677046981664,2.11011696773672,2.4693628498498,2.01066546127481,14.8316980640624,7.51916655983541,2.65383165584962,3.07357014900077,2.20841518460394,1.93950101254089,26.0948465705371,3.51336956413857,4.81727425670947,1.78819938646014,1.55759661857696,1.19980546198682,1.27070227073065,5.54225365797844,5.03250663100489,2.51308704225729,5.56237824615285,1.79000820131231,3.94797284663164,3.89379031362618,9.3692214742291,2.98576729464223,1.76905930903572,7.99679052368601,6.63614259109789,5.9774547152703,9.00310649026746,7.83665052745718,5.98721192531685,4.86832137082429,5.15359485078509,9.57202471734358,5.17363183038821,3.78212160335639,9.85326295318113,8.76782929710299,25.580346928755,29.6014341543842,37.6581309626537,5.17489093728082,1.40442637462647,0,0.568326998791185,5.38527008592305,2.34526059981096,2.88099298337624,3.55117103377815,4.32881309844288,5.707883176833,3.95307706075693,2.41446061259657,2.56883753207773,4.27855609775049,4.76085645829376,7.86367452594801,7.01759939641595,1.75640092232841,5.50246316917524,5.04695876553905,2.46971069710283,0.991256348951394,0.793351699990633,8.31824177087412,4.18026009348789,4.25262622362908,3.63030344322017,2.89091456998331,3.23383564391351,2.37264530772256,1.64698954724011,6.28338022000674,3.18330355265841,2.72949721966768,0.898819408654221,2.80979464837102,5.17767310461355,3.98302592001472,3.77020091612105,6.76246414038483,4.68398054044223,6.0125271021964,6.31222379012867,4.93244989569207,1.18088118383682,1.255989822731,1.1105744752962,0.296452627087149,1.33476084572875,0.196558995113203,0.224862112384854,0.202860121388503,1.20588579876208,0.763877555344259,0.287696137450811,2.91843408195064,0.274561413188081,0,1.48856379067401,1.87222603868736,0.505157755894224,0,0.964887042726734,9.05290631816363,3.22135400009824,7.17045896344914,5.7713329163564,7.04070744865506,7.37027532743989,4.99891645860629,7.21994497073856,14.1871629695572,24.8040452406628,21.5263937687608,11.1427054006702,14.3328534948693,6.50920763616802,0,0,6.88469982226651,4.13905119457099,9.15138362930414,7.14991288212439,0,5.55436039849621,0.631016438832513,0.780877488593277,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.584511715822624,0.395287777946524,9.96096080907602,18.4522110770749,10.6839362200353,10.5876523579824,9.23832688646199,2.65490276679926,3.8844901784797,1.51161778482376,3.20628635585027,6.20133975049623,5.22639751504677,6.97756391554197,7.27067458955011,5.70395805415554,5.05658812697306,3.16255825724996,1.03135543248187,0.680879211507576,7.0223826672211,7.63216234318252,5.5727629108214,6.38424841112185,5.88617098086833,8.06290200950393,4.87143918583359,7.97883807416615,3.38931313382112,2.42581237860458,15.1695352706162,32.2928853391811,31.362720962641,19.9351814485238,16.7423717739962,2.04036585640896,7.78786268444141,4.61351378154202,3.30218988741156,1.85194527369712,2.63715839806567,3.55404992074665,2.74533807847827,11.5585332395822,6.9975726161829,11.1941978781583,16.2294005062569,4.9032079005076,7.31950081656655,9.28845931067491,11.2907679847813,12.8833912610245,15.6442641806392,14.0510874733071,15.4436005770577,20.0903208602279,4.34937519160848,0,3.73791365109947,3.64008679005615,1.75006069509643,2.84151611651008,2.87225413334323,2.69921648885234,4.03633593016245,0.943734099831398,0.966336483304024,1.44015003128933,29.7050453390488,10.5417111950885,16.5364641035372,18.4487568628469,20.5880700017604,31.1929727006586,30.2892532790321,33.2301436142799,31.6024988337702,28.2727252690049,33.9784243911153,36.9365368003662,39.1582195476141,35.530578263197,11.789979947991,0,0.0897138566094757,0,9.07991091951295,3.56596703357246,5.12824547948342,19.507522496195,8.52672576860118,2.82375921308533,3.22227665555024,4.01026859407578,3.09335728218638,0,1.5107877947794,4.05013500139084,1.80128481289688,0.906284817968409,2.07104124700728,3.1136204275253,4.38927360741134,4.09760653809922,9.48116196566347,5.65955539095552,7.16989682955055,5.33392146723877,3.29656091582231,4.49286893428541,6.57012750585873,6.84394109703647,5.09291121742406,7.49132059759059,7.36289252655997,8.27070752960831,6.19181798667996,5.79421629724277,5.98018583437486,7.82963211526283,5.88795680537589,6.17164654293748,5.50174999093946,6.43777712857767,4.65108533223451,4.32903149910521,5.92302255241735,4.93905526756486,7.3659519202596,5.83957689537206,3.92799590160417,4.1522256343461,4.82671963640261,7.7753898202241,6.04253680625267,12.7318363247553,10.9916654292696,12.3983752476066,9.02458427002853,9.56441660344217,5.7353768971074,5.56482805489012 | |phase1_expression=13.4525031568027,0,0.454999239389536,0,0,1.00727563147134,0.233612640595526,45.3222865279933,36.745856481585,37.9184532641629,3.76679530096111,8.13676021752431,59.2354525561972,70.3734239472929,1.99865857089398,2.02475267389826,0.699561878128147,9.14840279538889,8.36398044995006,8.91218268775863,6.71841992193451,6.45391182805754,2.87319768052829,2.07990149631429,2.2940928106717,0,0.430761996159075,0.430942465371778,0.190023419456374,0,0.443461021310609,0,0,0,0,0.997407872150954,1.22501613757421,0,0,0,0,0,0,5.03587271902309,5.47435428585379,12.664725899156,1.56478268869608,3.70642765846759,3.95435128922049,3.30530828426282,4.05960622713551,0,8.38913030288682,79.7898356212479,89.064856772753,0.514518872071894,1.43266719969378,0,5.05791152148994,4.23192783417626,5.07065122804943,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.768436610643109,4.97710139080693,3.24014251996058,3.15487442027073,5.71301968807607,8.39300455616131,2.9397791811589,3.45043695665651,2.75765635983006,8.8092704799511,10.7257363991558,9.67721159514334,5.40733779693795,7.22752384459036,5.73004707612436,6.97957497503452,7.87867654044352,7.18151764551008,7.07108605136802,8.25755748634797,3.54158947068071,0.530083353332288,0,4.34796733052517,1.72084775396277,0,0,0,0,3.65155492342555,2.38602451609281,0.519572009205738,0.70667914902068,3.38024207464033,1.28326477414318,5.09610479413291,0,0.865964164044856,1.26679932737549,0,3.19714863213368,31.5904218049549,1.63286352971307,3.29622120855658,1.21786191324856,2.53677046981664,2.11011696773672,2.4693628498498,2.01066546127481,14.8316980640624,7.51916655983541,2.65383165584962,3.07357014900077,2.20841518460394,1.93950101254089,26.0948465705371,3.51336956413857,4.81727425670947,1.78819938646014,1.55759661857696,1.19980546198682,1.27070227073065,5.54225365797844,5.03250663100489,2.51308704225729,5.56237824615285,1.79000820131231,3.94797284663164,3.89379031362618,9.3692214742291,2.98576729464223,1.76905930903572,7.99679052368601,6.63614259109789,5.9774547152703,9.00310649026746,7.83665052745718,5.98721192531685,4.86832137082429,5.15359485078509,9.57202471734358,5.17363183038821,3.78212160335639,9.85326295318113,8.76782929710299,25.580346928755,29.6014341543842,37.6581309626537,5.17489093728082,1.40442637462647,0,0.568326998791185,5.38527008592305,2.34526059981096,2.88099298337624,3.55117103377815,4.32881309844288,5.707883176833,3.95307706075693,2.41446061259657,2.56883753207773,4.27855609775049,4.76085645829376,7.86367452594801,7.01759939641595,1.75640092232841,5.50246316917524,5.04695876553905,2.46971069710283,0.991256348951394,0.793351699990633,8.31824177087412,4.18026009348789,4.25262622362908,3.63030344322017,2.89091456998331,3.23383564391351,2.37264530772256,1.64698954724011,6.28338022000674,3.18330355265841,2.72949721966768,0.898819408654221,2.80979464837102,5.17767310461355,3.98302592001472,3.77020091612105,6.76246414038483,4.68398054044223,6.0125271021964,6.31222379012867,4.93244989569207,1.18088118383682,1.255989822731,1.1105744752962,0.296452627087149,1.33476084572875,0.196558995113203,0.224862112384854,0.202860121388503,1.20588579876208,0.763877555344259,0.287696137450811,2.91843408195064,0.274561413188081,0,1.48856379067401,1.87222603868736,0.505157755894224,0,0.964887042726734,9.05290631816363,3.22135400009824,7.17045896344914,5.7713329163564,7.04070744865506,7.37027532743989,4.99891645860629,7.21994497073856,14.1871629695572,24.8040452406628,21.5263937687608,11.1427054006702,14.3328534948693,6.50920763616802,0,0,6.88469982226651,4.13905119457099,9.15138362930414,7.14991288212439,0,5.55436039849621,0.631016438832513,0.780877488593277,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.584511715822624,0.395287777946524,9.96096080907602,18.4522110770749,10.6839362200353,10.5876523579824,9.23832688646199,2.65490276679926,3.8844901784797,1.51161778482376,3.20628635585027,6.20133975049623,5.22639751504677,6.97756391554197,7.27067458955011,5.70395805415554,5.05658812697306,3.16255825724996,1.03135543248187,0.680879211507576,7.0223826672211,7.63216234318252,5.5727629108214,6.38424841112185,5.88617098086833,8.06290200950393,4.87143918583359,7.97883807416615,3.38931313382112,2.42581237860458,15.1695352706162,32.2928853391811,31.362720962641,19.9351814485238,16.7423717739962,2.04036585640896,7.78786268444141,4.61351378154202,3.30218988741156,1.85194527369712,2.63715839806567,3.55404992074665,2.74533807847827,11.5585332395822,6.9975726161829,11.1941978781583,16.2294005062569,4.9032079005076,7.31950081656655,9.28845931067491,11.2907679847813,12.8833912610245,15.6442641806392,14.0510874733071,15.4436005770577,20.0903208602279,4.34937519160848,0,3.73791365109947,3.64008679005615,1.75006069509643,2.84151611651008,2.87225413334323,2.69921648885234,4.03633593016245,0.943734099831398,0.966336483304024,1.44015003128933,29.7050453390488,10.5417111950885,16.5364641035372,18.4487568628469,20.5880700017604,31.1929727006586,30.2892532790321,33.2301436142799,31.6024988337702,28.2727252690049,33.9784243911153,36.9365368003662,39.1582195476141,35.530578263197,11.789979947991,0,0.0897138566094757,0,9.07991091951295,3.56596703357246,5.12824547948342,19.507522496195,8.52672576860118,2.82375921308533,3.22227665555024,4.01026859407578,3.09335728218638,0,1.5107877947794,4.05013500139084,1.80128481289688,0.906284817968409,2.07104124700728,3.1136204275253,4.38927360741134,4.09760653809922,9.48116196566347,5.65955539095552,7.16989682955055,5.33392146723877,3.29656091582231,4.49286893428541,6.57012750585873,6.84394109703647,5.09291121742406,7.49132059759059,7.36289252655997,8.27070752960831,6.19181798667996,5.79421629724277,5.98018583437486,7.82963211526283,5.88795680537589,6.17164654293748,5.50174999093946,6.43777712857767,4.65108533223451,4.32903149910521,5.92302255241735,4.93905526756486,7.3659519202596,5.83957689537206,3.92799590160417,4.1522256343461,4.82671963640261,7.7753898202241,6.04253680625267,12.7318363247553,10.9916654292696,12.3983752476066,9.02458427002853,9.56441660344217,5.7353768971074,5.56482805489012 | ||
|short_description=p3@Ablim1 | |short_description=p3@Ablim1 | ||
}} | }} |
Revision as of 20:37, 14 November 2012
Short description: | p3@Ablim1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ablim1_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 0bp_to_ENSMUST00000104902, ENSMUST00000111528, ENSMUST00000111529, ENSMUST00000150425, NM_001103178, uc009vbz.1_5end |
EntrezGene: | Ablim1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anterior region of body | 8.82e-13 | 43 |
craniocervical region | 9.82e-11 | 36 |
respiratory tract | 2.81e-10 | 41 |
respiratory system | 3.91e-10 | 42 |
pharynx | 7.50e-10 | 24 |
upper respiratory tract | 7.50e-10 | 24 |
chordate pharynx | 7.50e-10 | 24 |
pharyngeal arch system | 7.50e-10 | 24 |
pharyngeal region of foregut | 7.50e-10 | 24 |
thymus | 2.01e-09 | 23 |
neck | 2.01e-09 | 23 |
respiratory system epithelium | 2.01e-09 | 23 |
hemolymphoid system gland | 2.01e-09 | 23 |
pharyngeal epithelium | 2.01e-09 | 23 |
thymic region | 2.01e-09 | 23 |
pharyngeal gland | 2.01e-09 | 23 |
entire pharyngeal arch endoderm | 2.01e-09 | 23 |
thymus primordium | 2.01e-09 | 23 |
early pharyngeal endoderm | 2.01e-09 | 23 |
gland of gut | 3.64e-09 | 24 |
segment of respiratory tract | 3.05e-07 | 27 |
mixed endoderm/mesoderm-derived structure | 3.40e-07 | 35 |
hemopoietic organ | 5.60e-07 | 29 |
immune organ | 5.60e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.