FFCP PHASE1:Hg19::chr2:20251800..20251815,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000860!9.38e-16!45;CL:0002057!3.04e-14!42;CL:0000557!3.58e-08!71;CL:0000839!6.59e-08!70;CL:0002009!1.57e-07!65;CL:0002194!2.06e-07!63;CL:0000576!2.06e-07!63;CL:0000040!2.06e-07!63;CL:0000559!2.06e-07!63 | |ontology_enrichment_celltype=CL:0000860!9.38e-16!45;CL:0002057!3.04e-14!42;CL:0000557!3.58e-08!71;CL:0000839!6.59e-08!70;CL:0002009!1.57e-07!65;CL:0002194!2.06e-07!63;CL:0000576!2.06e-07!63;CL:0000040!2.06e-07!63;CL:0000559!2.06e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.67e-43;33!CL:0002057;2.67e-43;33!CL:0000473;1.20e-29;39!CL:0000234;1.20e-29;39!CL:0000576;1.48e-18;48!CL:0000766;5.42e-11;69 | |ontology_enrichment_celltype_v019=CL:0000860;2.67e-43;33!CL:0002057;2.67e-43;33!CL:0000473;1.20e-29;39!CL:0000234;1.20e-29;39!CL:0000576;1.48e-18;48!CL:0000766;5.42e-11;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.17e-35,42;CL:0002057,2.17e-35,42;CL:0000473,7.69e-30,48;CL:0000234,7.69e-30,48;CL:0002194,4.08e-22,59;CL:0000576,4.08e-22,59;CL:0000040,4.08e-22,59;CL:0000559,4.08e-22,59;CL:0002009,4.00e-21,61;CL:0000839,2.19e-20,66;CL:0000557,5.89e-20,67;CL:0000766,5.41e-18,72;CL:0000763,2.28e-09,108;CL:0000049,2.28e-09,108;CL:0002031,1.66e-08,120;CL:0002087,1.81e-08,115 | |||
|ontology_enrichment_development_v019=CL:0002057;7.75e-27;42 | |ontology_enrichment_development_v019=CL:0002057;7.75e-27;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.97e-08!115;UBERON:0000062!3.24e-07!511;UBERON:0001474!6.90e-07!86;UBERON:0002371!8.47e-07!80;UBERON:0000468!8.74e-07!659 | |ontology_enrichment_uberon=UBERON:0002405!4.97e-08!115;UBERON:0000062!3.24e-07!511;UBERON:0001474!6.90e-07!86;UBERON:0002371!8.47e-07!80;UBERON:0000468!8.74e-07!659 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.55e-19,76;UBERON:0001474,1.31e-18,82;UBERON:0004765,3.75e-16,90;UBERON:0002405,2.80e-15,93;UBERON:0001434,1.19e-13,100;UBERON:0002390,4.87e-13,98;UBERON:0003061,4.87e-13,98;UBERON:0002193,6.01e-12,108;UBERON:0003081,9.25e-09,203;UBERON:0002204,9.31e-08,167 | |||
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| ||
|short_description=p6@LAPTM4A | |short_description=p6@LAPTM4A | ||
}} | }} |
Revision as of 06:40, 16 November 2012
Short description: | p6@LAPTM4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_LAPTM4A_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000175091, NM_014713, uc002rdm.2, uc002rdn.2, uc010yjx.1_5end |
EntrezGene: | LAPTM4A |
HGNC: | 6924 |
UniProt: | Q15012Q6IBP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.17e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.17e-35 | 42 |
defensive cell | 7.69e-30 | 48 |
phagocyte | 7.69e-30 | 48 |
monopoietic cell | 4.08e-22 | 59 |
monocyte | 4.08e-22 | 59 |
monoblast | 4.08e-22 | 59 |
promonocyte | 4.08e-22 | 59 |
macrophage dendritic cell progenitor | 4.00e-21 | 61 |
myeloid lineage restricted progenitor cell | 2.19e-20 | 66 |
granulocyte monocyte progenitor cell | 5.89e-20 | 67 |
myeloid leukocyte | 5.41e-18 | 72 |
myeloid cell | 2.28e-09 | 108 |
common myeloid progenitor | 2.28e-09 | 108 |
hematopoietic lineage restricted progenitor cell | 1.66e-08 | 120 |
nongranular leukocyte | 1.81e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.55e-19 | 76 |
bone element | 1.31e-18 | 82 |
skeletal element | 3.75e-16 | 90 |
immune system | 2.80e-15 | 93 |
skeletal system | 1.19e-13 | 100 |
hematopoietic system | 4.87e-13 | 98 |
blood island | 4.87e-13 | 98 |
hemolymphoid system | 6.01e-12 | 108 |
lateral plate mesoderm | 9.25e-09 | 203 |
musculoskeletal system | 9.31e-08 | 167 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.