FFCP PHASE1:Hg19::chr7:47621674..47621719,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.04e-09!180;CL:0000057!1.99e-07!75;CL:0000192!2.12e-07!42;CL:0000514!2.12e-07!42 | |ontology_enrichment_celltype=CL:0000055!1.04e-09!180;CL:0000057!1.99e-07!75;CL:0000192!2.12e-07!42;CL:0000514!2.12e-07!42 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,9.64e-08,43;CL:0000514,9.64e-08,43;CL:0000057,1.60e-07,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!6.99e-18!511;UBERON:0000468!9.57e-15!659;UBERON:0000926!5.74e-14!448;UBERON:0004120!5.74e-14!448;UBERON:0006603!5.74e-14!448;UBERON:0000467!5.30e-13!625;UBERON:0000480!7.03e-13!626;UBERON:0005256!1.38e-12!143;UBERON:0003104!1.55e-12!238;UBERON:0009142!1.55e-12!238;UBERON:0002100!4.06e-12!216;UBERON:0000481!1.35e-11!347;UBERON:0001007!6.67e-10!155;UBERON:0001555!6.67e-10!155;UBERON:0007026!6.67e-10!155;UBERON:0004119!1.41e-09!169;UBERON:0000925!1.41e-09!169;UBERON:0006595!1.41e-09!169;UBERON:0000475!3.41e-09!365;UBERON:0002050!9.97e-09!605;UBERON:0005423!9.97e-09!605;UBERON:0000923!1.34e-08!604;UBERON:0005291!1.34e-08!604;UBERON:0006598!1.34e-08!604;UBERON:0002532!1.34e-08!604;UBERON:0002204!2.29e-08!167;UBERON:0000922!2.40e-08!612;UBERON:0004921!1.48e-07!129;UBERON:0004185!1.48e-07!129;UBERON:0000077!5.23e-07!130;UBERON:0009497!7.65e-07!25;UBERON:0000015!7.65e-07!25;UBERON:0002423!7.65e-07!25;UBERON:0006235!7.65e-07!25;UBERON:0004161!7.65e-07!25;UBERON:0005177!8.39e-07!107 | |ontology_enrichment_uberon=UBERON:0000062!6.99e-18!511;UBERON:0000468!9.57e-15!659;UBERON:0000926!5.74e-14!448;UBERON:0004120!5.74e-14!448;UBERON:0006603!5.74e-14!448;UBERON:0000467!5.30e-13!625;UBERON:0000480!7.03e-13!626;UBERON:0005256!1.38e-12!143;UBERON:0003104!1.55e-12!238;UBERON:0009142!1.55e-12!238;UBERON:0002100!4.06e-12!216;UBERON:0000481!1.35e-11!347;UBERON:0001007!6.67e-10!155;UBERON:0001555!6.67e-10!155;UBERON:0007026!6.67e-10!155;UBERON:0004119!1.41e-09!169;UBERON:0000925!1.41e-09!169;UBERON:0006595!1.41e-09!169;UBERON:0000475!3.41e-09!365;UBERON:0002050!9.97e-09!605;UBERON:0005423!9.97e-09!605;UBERON:0000923!1.34e-08!604;UBERON:0005291!1.34e-08!604;UBERON:0006598!1.34e-08!604;UBERON:0002532!1.34e-08!604;UBERON:0002204!2.29e-08!167;UBERON:0000922!2.40e-08!612;UBERON:0004921!1.48e-07!129;UBERON:0004185!1.48e-07!129;UBERON:0000077!5.23e-07!130;UBERON:0009497!7.65e-07!25;UBERON:0000015!7.65e-07!25;UBERON:0002423!7.65e-07!25;UBERON:0006235!7.65e-07!25;UBERON:0004161!7.65e-07!25;UBERON:0005177!8.39e-07!107 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;9.07e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0002423;9.07e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.82e-14,160;UBERON:0009142,1.82e-14,160;UBERON:0005256,4.08e-12,122;UBERON:0002100,7.78e-11,199;UBERON:0002204,2.17e-09,167;UBERON:0001007,5.09e-09,145;UBERON:0001555,5.09e-09,145;UBERON:0007026,5.09e-09,145;UBERON:0004119,5.93e-09,160;UBERON:0000925,5.93e-09,160;UBERON:0006595,5.93e-09,160;UBERON:0000922,1.83e-07,592;UBERON:0000926,2.51e-07,315;UBERON:0004120,2.51e-07,315;UBERON:0006603,2.51e-07,315;UBERON:0005423,2.55e-07,581;UBERON:0009497,7.57e-07,25;UBERON:0000015,7.57e-07,25;UBERON:0002423,7.57e-07,25;UBERON:0006235,7.57e-07,25;UBERON:0004161,7.57e-07,25;UBERON:0000923,7.59e-07,560;UBERON:0010316,7.59e-07,560;UBERON:0005291,7.59e-07,560;UBERON:0006598,7.59e-07,560;UBERON:0010317,7.59e-07,560;UBERON:0002532,7.59e-07,560;UBERON:0002050,9.84e-07,564 | |||
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| ||
|short_description=p1@TNS3 | |short_description=p1@TNS3 | ||
}} | }} |
Revision as of 04:20, 17 November 2012
Short description: | p1@TNS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TNS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000474346_5end |
EntrezGene: | TNS3 |
HGNC: | 21616 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 9.64e-08 | 43 |
smooth muscle myoblast | 9.64e-08 | 43 |
fibroblast | 1.60e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.82e-14 | 160 |
entire embryonic mesenchyme | 1.82e-14 | 160 |
trunk mesenchyme | 4.08e-12 | 122 |
trunk | 7.78e-11 | 199 |
musculoskeletal system | 2.17e-09 | 167 |
digestive system | 5.09e-09 | 145 |
digestive tract | 5.09e-09 | 145 |
primitive gut | 5.09e-09 | 145 |
endoderm-derived structure | 5.93e-09 | 160 |
endoderm | 5.93e-09 | 160 |
presumptive endoderm | 5.93e-09 | 160 |
embryo | 1.83e-07 | 592 |
mesoderm | 2.51e-07 | 315 |
mesoderm-derived structure | 2.51e-07 | 315 |
presumptive mesoderm | 2.51e-07 | 315 |
developing anatomical structure | 2.55e-07 | 581 |
epithelium of foregut-midgut junction | 7.57e-07 | 25 |
anatomical boundary | 7.57e-07 | 25 |
hepatobiliary system | 7.57e-07 | 25 |
foregut-midgut junction | 7.57e-07 | 25 |
septum transversum | 7.57e-07 | 25 |
germ layer | 7.59e-07 | 560 |
germ layer / neural crest | 7.59e-07 | 560 |
embryonic tissue | 7.59e-07 | 560 |
presumptive structure | 7.59e-07 | 560 |
germ layer / neural crest derived structure | 7.59e-07 | 560 |
epiblast (generic) | 7.59e-07 | 560 |
embryonic structure | 9.84e-07 | 564 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.