FFCP PHASE1:Hg19::chr17:48264399..48264490,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.18e-40!180;CL:0000057!2.76e-24!75;CL:0000183!2.50e-16!59;CL:0000680!6.39e-16!57;CL:0000056!6.39e-16!57;CL:0000355!6.39e-16!57;CL:0000187!2.61e-15!54;CL:0000393!3.03e-14!60;CL:0000211!3.03e-14!60;CL:0000192!1.18e-11!42;CL:0000514!1.18e-11!42;CL:0000048!2.76e-09!430;CL:0000723!1.11e-08!436;CL:0000499!2.54e-08!27;CL:0002620!2.58e-08!23;CL:0000034!3.13e-08!444;CL:0000359!7.05e-08!32;CL:0002334!9.51e-08!12;CL:0002371!1.35e-07!591;CL:0000222!1.47e-07!119;CL:0000144!1.73e-07!625;CL:0000327!3.12e-07!14 | |ontology_enrichment_celltype=CL:0000055!1.18e-40!180;CL:0000057!2.76e-24!75;CL:0000183!2.50e-16!59;CL:0000680!6.39e-16!57;CL:0000056!6.39e-16!57;CL:0000355!6.39e-16!57;CL:0000187!2.61e-15!54;CL:0000393!3.03e-14!60;CL:0000211!3.03e-14!60;CL:0000192!1.18e-11!42;CL:0000514!1.18e-11!42;CL:0000048!2.76e-09!430;CL:0000723!1.11e-08!436;CL:0000499!2.54e-08!27;CL:0002620!2.58e-08!23;CL:0000034!3.13e-08!444;CL:0000359!7.05e-08!32;CL:0002334!9.51e-08!12;CL:0002371!1.35e-07!591;CL:0000222!1.47e-07!119;CL:0000144!1.73e-07!625;CL:0000327!3.12e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000134;8.89e-11;55!CL:0000187;3.30e-10;55!CL:0000048;4.27e-10;58!CL:0000723;6.96e-10;61!CL:0000192;7.32e-10;43!CL:0000057;9.65e-10;73!CL:0002320;1.21e-09;188!CL:0002334;1.06e-08;12!CL:0000359;1.43e-08;32!CL:0000499;3.31e-08;28!CL:0000393;8.29e-08;61!CL:0000211;8.29e-08;61!CL:0002620;1.67e-07;23!CL:0000327;1.98e-07;15!CL:0002494;4.40e-07;16!CL:0000034;4.59e-07;69 | |ontology_enrichment_celltype_v019=CL:0000134;8.89e-11;55!CL:0000187;3.30e-10;55!CL:0000048;4.27e-10;58!CL:0000723;6.96e-10;61!CL:0000192;7.32e-10;43!CL:0000057;9.65e-10;73!CL:0002320;1.21e-09;188!CL:0002334;1.06e-08;12!CL:0000359;1.43e-08;32!CL:0000499;3.31e-08;28!CL:0000393;8.29e-08;61!CL:0000211;8.29e-08;61!CL:0002620;1.67e-07;23!CL:0000327;1.98e-07;15!CL:0002494;4.40e-07;16!CL:0000034;4.59e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.45e-26,76;CL:0000680,1.43e-18,58;CL:0000056,1.43e-18,58;CL:0000355,1.43e-18,58;CL:0000187,7.22e-18,55;CL:0000048,6.85e-16,427;CL:0000723,7.83e-15,433;CL:0000393,2.51e-14,61;CL:0000211,2.51e-14,61;CL:0000192,1.18e-13,43;CL:0000514,1.18e-13,43;CL:0000034,1.72e-13,441;CL:0000359,6.33e-09,32;CL:0002334,1.15e-08,12;CL:0000499,2.93e-08,28;CL:0000222,6.60e-08,121;CL:0002620,1.68e-07,23;CL:0002320,1.91e-07,361;CL:0000327,1.91e-07,15;CL:0002494,4.91e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000355;3.20e-10;58!CL:0000514;7.32e-10;43 | |ontology_enrichment_development_v019=CL:0000355;3.20e-10;58!CL:0000514;7.32e-10;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.61e-19!83;UBERON:0002329!6.61e-19!83;UBERON:0003077!6.61e-19!83;UBERON:0003059!6.61e-19!83;UBERON:0007282!6.61e-19!83;UBERON:0009618!6.61e-19!83;UBERON:0007285!6.61e-19!83;UBERON:0004290!5.12e-17!70;UBERON:0001134!7.72e-16!61;UBERON:0002036!7.72e-16!61;UBERON:0003082!7.72e-16!61;UBERON:0002385!9.45e-16!63;UBERON:0001015!9.45e-16!63;UBERON:0000383!9.45e-16!63;UBERON:0005256!1.98e-14!143;UBERON:0000486!3.01e-14!82;UBERON:0002100!6.11e-10!216;UBERON:0000475!4.03e-09!365;UBERON:0003102!4.23e-08!95;UBERON:0002199!7.04e-08!45;UBERON:0002416!7.04e-08!45;UBERON:0001013!1.52e-07!14;UBERON:0004872!1.68e-07!84;UBERON:0000481!6.89e-07!347;UBERON:0000948!8.03e-07!24;UBERON:0005498!8.03e-07!24;UBERON:0004140!8.03e-07!24;UBERON:0009881!8.03e-07!24;UBERON:0004141!8.03e-07!24;UBERON:0003084!8.03e-07!24;UBERON:0007005!8.03e-07!24;UBERON:0004139!8.03e-07!24;UBERON:0004291!8.03e-07!24;UBERON:0003104!8.69e-07!238;UBERON:0009142!8.69e-07!238 | |ontology_enrichment_uberon=UBERON:0000914!6.61e-19!83;UBERON:0002329!6.61e-19!83;UBERON:0003077!6.61e-19!83;UBERON:0003059!6.61e-19!83;UBERON:0007282!6.61e-19!83;UBERON:0009618!6.61e-19!83;UBERON:0007285!6.61e-19!83;UBERON:0004290!5.12e-17!70;UBERON:0001134!7.72e-16!61;UBERON:0002036!7.72e-16!61;UBERON:0003082!7.72e-16!61;UBERON:0002385!9.45e-16!63;UBERON:0001015!9.45e-16!63;UBERON:0000383!9.45e-16!63;UBERON:0005256!1.98e-14!143;UBERON:0000486!3.01e-14!82;UBERON:0002100!6.11e-10!216;UBERON:0000475!4.03e-09!365;UBERON:0003102!4.23e-08!95;UBERON:0002199!7.04e-08!45;UBERON:0002416!7.04e-08!45;UBERON:0001013!1.52e-07!14;UBERON:0004872!1.68e-07!84;UBERON:0000481!6.89e-07!347;UBERON:0000948!8.03e-07!24;UBERON:0005498!8.03e-07!24;UBERON:0004140!8.03e-07!24;UBERON:0009881!8.03e-07!24;UBERON:0004141!8.03e-07!24;UBERON:0003084!8.03e-07!24;UBERON:0007005!8.03e-07!24;UBERON:0004139!8.03e-07!24;UBERON:0004291!8.03e-07!24;UBERON:0003104!8.69e-07!238;UBERON:0009142!8.69e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;7.11e-10;198!UBERON:0001013;1.98e-08;14!UBERON:0002385;2.01e-07;31!UBERON:0001015;2.01e-07;31!UBERON:0000383;2.01e-07;31!UBERON:0000948;5.16e-07;22!UBERON:0002204;5.83e-07;70 | |ontology_enrichment_uberon_v019=UBERON:0002384;7.11e-10;198!UBERON:0001013;1.98e-08;14!UBERON:0002385;2.01e-07;31!UBERON:0001015;2.01e-07;31!UBERON:0000383;2.01e-07;31!UBERON:0000948;5.16e-07;22!UBERON:0002204;5.83e-07;70 | ||
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| ||
|short_description=p11@COL1A1 | |short_description=p11@COL1A1 | ||
}} | }} |
Revision as of 04:24, 18 November 2012
Short description: | p11@COL1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_COL1A1_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | -225bp_to_ENST00000510710_5end |
EntrezGene: | COL1A1 |
HGNC: | 2197 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.45e-26 | 76 |
muscle precursor cell | 1.43e-18 | 58 |
myoblast | 1.43e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.43e-18 | 58 |
muscle cell | 7.22e-18 | 55 |
multi fate stem cell | 6.85e-16 | 427 |
somatic stem cell | 7.83e-15 | 433 |
electrically responsive cell | 2.51e-14 | 61 |
electrically active cell | 2.51e-14 | 61 |
smooth muscle cell | 1.18e-13 | 43 |
smooth muscle myoblast | 1.18e-13 | 43 |
stem cell | 1.72e-13 | 441 |
vascular associated smooth muscle cell | 6.33e-09 | 32 |
preadipocyte | 1.15e-08 | 12 |
stromal cell | 2.93e-08 | 28 |
mesodermal cell | 6.60e-08 | 121 |
skin fibroblast | 1.68e-07 | 23 |
connective tissue cell | 1.91e-07 | 361 |
extracellular matrix secreting cell | 1.91e-07 | 15 |
cardiocyte | 4.91e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.