FFCP PHASE1:Hg19::chr21:47531453..47531471,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!5.18e-47!180;CL:0000057!1.40e-27!75;CL:0000680!7.41e-19!57;CL:0000056!7.41e-19!57;CL:0000355!7.41e-19!57;CL:0000187!4.13e-18!54;CL:0000183!1.06e-17!59;CL:0000393!1.77e-17!60;CL:0000211!1.77e-17!60;CL:0000192!1.27e-15!42;CL:0000514!1.27e-15!42;CL:0000048!4.03e-14!430;CL:0000723!6.05e-13!436;CL:0000034!1.09e-12!444;CL:0000359!2.10e-12!32;CL:0002620!1.89e-11!23;CL:0000499!5.81e-08!27 | |ontology_enrichment_celltype=CL:0000055!5.18e-47!180;CL:0000057!1.40e-27!75;CL:0000680!7.41e-19!57;CL:0000056!7.41e-19!57;CL:0000355!7.41e-19!57;CL:0000187!4.13e-18!54;CL:0000183!1.06e-17!59;CL:0000393!1.77e-17!60;CL:0000211!1.77e-17!60;CL:0000192!1.27e-15!42;CL:0000514!1.27e-15!42;CL:0000048!4.03e-14!430;CL:0000723!6.05e-13!436;CL:0000034!1.09e-12!444;CL:0000359!2.10e-12!32;CL:0002620!1.89e-11!23;CL:0000499!5.81e-08!27 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.34e-13;23!CL:0000057;3.37e-13;73!CL:0000723;1.52e-11;61!CL:0000134;1.82e-11;55!CL:0000192;3.41e-10;43!CL:0000048;3.80e-10;58!CL:0000359;4.65e-10;32!CL:0002320;6.97e-10;188!CL:0000187;1.10e-09;55!CL:0000393;2.29e-08;61!CL:0000211;2.29e-08;61!CL:0002570;3.58e-08;8!CL:0000034;4.08e-08;69!CL:0002334;4.69e-08;12 | |ontology_enrichment_celltype_v019=CL:0002620;1.34e-13;23!CL:0000057;3.37e-13;73!CL:0000723;1.52e-11;61!CL:0000134;1.82e-11;55!CL:0000192;3.41e-10;43!CL:0000048;3.80e-10;58!CL:0000359;4.65e-10;32!CL:0002320;6.97e-10;188!CL:0000187;1.10e-09;55!CL:0000393;2.29e-08;61!CL:0000211;2.29e-08;61!CL:0002570;3.58e-08;8!CL:0000034;4.08e-08;69!CL:0002334;4.69e-08;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.62e-33,76;CL:0000048,6.07e-23,427;CL:0000723,7.61e-22,433;CL:0000034,1.94e-20,441;CL:0000680,2.57e-18,58;CL:0000056,2.57e-18,58;CL:0000355,2.57e-18,58;CL:0000187,2.49e-17,55;CL:0000393,3.47e-14,61;CL:0000211,3.47e-14,61;CL:0000192,3.98e-14,43;CL:0000514,3.98e-14,43;CL:0002620,9.78e-14,23;CL:0002320,9.16e-13,361;CL:0000134,1.71e-10,354;CL:0000359,2.25e-10,32;CL:0002570,2.75e-08,8;CL:0002334,6.92e-08,12;CL:0000219,1.02e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000514;3.41e-10;43!CL:0000355;9.21e-10;58 | |ontology_enrichment_development_v019=CL:0000514;3.41e-10;43!CL:0000355;9.21e-10;58 | ||
|ontology_enrichment_disease=DOID:2394!6.02e-07!14 | |ontology_enrichment_disease=DOID:2394!6.02e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;8.45e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;8.45e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,5.81e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.04e-25!83;UBERON:0002329!1.04e-25!83;UBERON:0003077!1.04e-25!83;UBERON:0003059!1.04e-25!83;UBERON:0007282!1.04e-25!83;UBERON:0009618!1.04e-25!83;UBERON:0007285!1.04e-25!83;UBERON:0004290!1.83e-24!70;UBERON:0000486!1.22e-20!82;UBERON:0002385!2.97e-20!63;UBERON:0001015!2.97e-20!63;UBERON:0000383!2.97e-20!63;UBERON:0001134!7.39e-20!61;UBERON:0002036!7.39e-20!61;UBERON:0003082!7.39e-20!61;UBERON:0005256!3.01e-17!143;UBERON:0003102!5.35e-13!95;UBERON:0002199!2.23e-11!45;UBERON:0002416!2.23e-11!45;UBERON:0002100!3.33e-11!216;UBERON:0001013!6.98e-10!14;UBERON:0003104!7.28e-09!238;UBERON:0009142!7.28e-09!238;UBERON:0000475!7.60e-09!365;UBERON:0002097!9.08e-09!40;UBERON:0004573!1.55e-08!33;UBERON:0004571!1.55e-08!33;UBERON:0001637!2.89e-08!42;UBERON:0003509!2.89e-08!42;UBERON:0004572!2.89e-08!42;UBERON:0004872!2.99e-08!84;UBERON:0000481!2.28e-07!347;UBERON:0001135!8.74e-07!15 | |ontology_enrichment_uberon=UBERON:0000914!1.04e-25!83;UBERON:0002329!1.04e-25!83;UBERON:0003077!1.04e-25!83;UBERON:0003059!1.04e-25!83;UBERON:0007282!1.04e-25!83;UBERON:0009618!1.04e-25!83;UBERON:0007285!1.04e-25!83;UBERON:0004290!1.83e-24!70;UBERON:0000486!1.22e-20!82;UBERON:0002385!2.97e-20!63;UBERON:0001015!2.97e-20!63;UBERON:0000383!2.97e-20!63;UBERON:0001134!7.39e-20!61;UBERON:0002036!7.39e-20!61;UBERON:0003082!7.39e-20!61;UBERON:0005256!3.01e-17!143;UBERON:0003102!5.35e-13!95;UBERON:0002199!2.23e-11!45;UBERON:0002416!2.23e-11!45;UBERON:0002100!3.33e-11!216;UBERON:0001013!6.98e-10!14;UBERON:0003104!7.28e-09!238;UBERON:0009142!7.28e-09!238;UBERON:0000475!7.60e-09!365;UBERON:0002097!9.08e-09!40;UBERON:0004573!1.55e-08!33;UBERON:0004571!1.55e-08!33;UBERON:0001637!2.89e-08!42;UBERON:0003509!2.89e-08!42;UBERON:0004572!2.89e-08!42;UBERON:0004872!2.99e-08!84;UBERON:0000481!2.28e-07!347;UBERON:0001135!8.74e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.52e-12;14!UBERON:0002385;1.84e-11;31!UBERON:0001015;1.84e-11;31!UBERON:0000383;1.84e-11;31!UBERON:0002384;2.42e-10;198!UBERON:0002199;9.66e-10;46!UBERON:0002416;9.66e-10;46!UBERON:0003102;6.92e-09;50!UBERON:0004573;1.80e-08;33!UBERON:0004571;1.80e-08;33!UBERON:0002097;1.88e-08;41!UBERON:0002067;1.80e-07;9!UBERON:0002204;2.17e-07;70!UBERON:0001134;6.66e-07;16!UBERON:0002036;6.66e-07;16 | |ontology_enrichment_uberon_v019=UBERON:0001013;1.52e-12;14!UBERON:0002385;1.84e-11;31!UBERON:0001015;1.84e-11;31!UBERON:0000383;1.84e-11;31!UBERON:0002384;2.42e-10;198!UBERON:0002199;9.66e-10;46!UBERON:0002416;9.66e-10;46!UBERON:0003102;6.92e-09;50!UBERON:0004573;1.80e-08;33!UBERON:0004571;1.80e-08;33!UBERON:0002097;1.88e-08;41!UBERON:0002067;1.80e-07;9!UBERON:0002204;2.17e-07;70!UBERON:0001134;6.66e-07;16!UBERON:0002036;6.66e-07;16 | ||
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| ||
|short_description=p13@COL6A2 | |short_description=p13@COL6A2 | ||
}} | }} |
Revision as of 03:29, 19 November 2012
Short description: | p13@COL6A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_COL6A2_5end |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | 62bp_to_EU832113, EU832207_5end |
EntrezGene: | COL6A2 |
HGNC: | 2212 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.62e-33 | 76 |
multi fate stem cell | 6.07e-23 | 427 |
somatic stem cell | 7.61e-22 | 433 |
stem cell | 1.94e-20 | 441 |
muscle precursor cell | 2.57e-18 | 58 |
myoblast | 2.57e-18 | 58 |
multi-potent skeletal muscle stem cell | 2.57e-18 | 58 |
muscle cell | 2.49e-17 | 55 |
electrically responsive cell | 3.47e-14 | 61 |
electrically active cell | 3.47e-14 | 61 |
smooth muscle cell | 3.98e-14 | 43 |
smooth muscle myoblast | 3.98e-14 | 43 |
skin fibroblast | 9.78e-14 | 23 |
connective tissue cell | 9.16e-13 | 361 |
mesenchymal cell | 1.71e-10 | 354 |
vascular associated smooth muscle cell | 2.25e-10 | 32 |
mesenchymal stem cell of adipose | 2.75e-08 | 8 |
preadipocyte | 6.92e-08 | 12 |
motile cell | 1.02e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.81e-09 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.