FFCP PHASE1:Hg19::chr2:97216132..97216143,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000181!8.29e-39!12;CL:0000417!8.29e-39!12;CL:0000668!8.29e-39!12;CL:0000414!8.29e-39!12;CL:0000412!8.29e-39!12;CL:0000182!8.29e-39!12;CL:0000223!1.69e-09!59 | |ontology_enrichment_celltype=CL:0000181!8.29e-39!12;CL:0000417!8.29e-39!12;CL:0000668!8.29e-39!12;CL:0000414!8.29e-39!12;CL:0000412!8.29e-39!12;CL:0000182!8.29e-39!12;CL:0000223!1.69e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.48e-72;12 | |ontology_enrichment_celltype_v019=CL:0000182;1.48e-72;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.49e-72,12;CL:0000223,6.74e-15,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.92e-58;11!UBERON:0009497;3.90e-49;13!UBERON:0001041;2.48e-21;30!UBERON:0003104;1.06e-20;31!CL:0000223;4.66e-10;58 | |ontology_enrichment_development_v019=UBERON:0004161;4.92e-58;11!UBERON:0009497;3.90e-49;13!UBERON:0001041;2.48e-21;30!UBERON:0003104;1.06e-20;31!CL:0000223;4.66e-10;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:7;2.88e-07;39 | |ontology_enrichment_disease_v019=DOID:7;2.88e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:7,1.13e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!5.87e-40!19;UBERON:0006925!5.87e-40!19;UBERON:0008836!5.87e-40!19;UBERON:0005057!1.79e-35!26;UBERON:0008835!2.33e-34!22;UBERON:0003894!2.33e-34!22;UBERON:0009854!8.11e-33!23;UBERON:0007499!4.21e-30!25;UBERON:0009497!4.21e-30!25;UBERON:0000015!4.21e-30!25;UBERON:0002423!4.21e-30!25;UBERON:0006235!4.21e-30!25;UBERON:0004161!4.21e-30!25;UBERON:0009856!6.69e-29!26;UBERON:0002365!4.70e-24!31;UBERON:0002330!4.70e-24!31;UBERON:0002368!3.59e-21!35;UBERON:0005172!1.92e-19!55;UBERON:0005173!1.92e-19!55;UBERON:0002417!2.29e-17!61;UBERON:0000916!2.29e-17!61;UBERON:0000949!3.36e-16!45;UBERON:0003929!2.70e-13!54;UBERON:0004921!4.01e-12!129;UBERON:0004185!4.01e-12!129;UBERON:0002530!4.60e-12!59;UBERON:0001041!3.66e-10!98;UBERON:0001007!1.01e-09!155;UBERON:0001555!1.01e-09!155;UBERON:0007026!1.01e-09!155;UBERON:0005177!3.58e-09!107;UBERON:0004119!9.90e-09!169;UBERON:0000925!9.90e-09!169;UBERON:0006595!9.90e-09!169;UBERON:0009569!1.36e-08!113;UBERON:0005911!2.50e-08!82;UBERON:0000077!3.07e-07!130;UBERON:0002405!8.04e-07!115 | |ontology_enrichment_uberon=UBERON:0002107!5.87e-40!19;UBERON:0006925!5.87e-40!19;UBERON:0008836!5.87e-40!19;UBERON:0005057!1.79e-35!26;UBERON:0008835!2.33e-34!22;UBERON:0003894!2.33e-34!22;UBERON:0009854!8.11e-33!23;UBERON:0007499!4.21e-30!25;UBERON:0009497!4.21e-30!25;UBERON:0000015!4.21e-30!25;UBERON:0002423!4.21e-30!25;UBERON:0006235!4.21e-30!25;UBERON:0004161!4.21e-30!25;UBERON:0009856!6.69e-29!26;UBERON:0002365!4.70e-24!31;UBERON:0002330!4.70e-24!31;UBERON:0002368!3.59e-21!35;UBERON:0005172!1.92e-19!55;UBERON:0005173!1.92e-19!55;UBERON:0002417!2.29e-17!61;UBERON:0000916!2.29e-17!61;UBERON:0000949!3.36e-16!45;UBERON:0003929!2.70e-13!54;UBERON:0004921!4.01e-12!129;UBERON:0004185!4.01e-12!129;UBERON:0002530!4.60e-12!59;UBERON:0001041!3.66e-10!98;UBERON:0001007!1.01e-09!155;UBERON:0001555!1.01e-09!155;UBERON:0007026!1.01e-09!155;UBERON:0005177!3.58e-09!107;UBERON:0004119!9.90e-09!169;UBERON:0000925!9.90e-09!169;UBERON:0006595!9.90e-09!169;UBERON:0009569!1.36e-08!113;UBERON:0005911!2.50e-08!82;UBERON:0000077!3.07e-07!130;UBERON:0002405!8.04e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.94e-75;19!UBERON:0006925;1.94e-75;19!UBERON:0002423;2.76e-57;25!UBERON:0002365;1.01e-44;31!UBERON:0002330;1.01e-44;31!UBERON:0002368;3.37e-39;33!UBERON:0000949;4.68e-28;43!UBERON:0005172;4.32e-17;52!UBERON:0005173;4.32e-17;52!UBERON:0002417;8.27e-16;58!UBERON:0000916;8.27e-16;58!UBERON:0002530;6.24e-14;57!UBERON:0001007;2.78e-09;81 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.94e-75;19!UBERON:0006925;1.94e-75;19!UBERON:0002423;2.76e-57;25!UBERON:0002365;1.01e-44;31!UBERON:0002330;1.01e-44;31!UBERON:0002368;3.37e-39;33!UBERON:0000949;4.68e-28;43!UBERON:0005172;4.32e-17;52!UBERON:0005173;4.32e-17;52!UBERON:0002417;8.27e-16;58!UBERON:0000916;8.27e-16;58!UBERON:0002530;6.24e-14;57!UBERON:0001007;2.78e-09;81 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.94e-75,19;UBERON:0006925,1.94e-75,19;UBERON:0008836,1.94e-75,19;UBERON:0008835,3.98e-65,22;UBERON:0003894,3.98e-65,22;UBERON:0009854,2.75e-62,23;UBERON:0007499,2.76e-57,25;UBERON:0009497,2.76e-57,25;UBERON:0000015,2.76e-57,25;UBERON:0002423,2.76e-57,25;UBERON:0006235,2.76e-57,25;UBERON:0004161,2.76e-57,25;UBERON:0009856,4.49e-55,26;UBERON:0002365,3.77e-46,31;UBERON:0002330,3.77e-46,31;UBERON:0002368,7.65e-41,35;UBERON:0000949,1.08e-31,45;UBERON:0003929,2.40e-26,54;UBERON:0005172,2.40e-26,54;UBERON:0005173,2.40e-26,54;UBERON:0002530,4.45e-24,59;UBERON:0002417,1.14e-23,60;UBERON:0000916,1.14e-23,60;UBERON:0005911,3.41e-17,82;UBERON:0001041,3.56e-16,87;UBERON:0005177,7.38e-14,101;UBERON:0009569,1.93e-12,112;UBERON:0003914,6.96e-12,117;UBERON:0004921,1.13e-11,118;UBERON:0005256,2.26e-11,122;UBERON:0001007,2.13e-09,145;UBERON:0001555,2.13e-09,145;UBERON:0007026,2.13e-09,145;UBERON:0000490,2.92e-09,148;UBERON:0001048,1.62e-08,160;UBERON:0003104,1.62e-08,160;UBERON:0009142,1.62e-08,160;UBERON:0004119,1.85e-08,160;UBERON:0000925,1.85e-08,160;UBERON:0006595,1.85e-08,160;UBERON:0000025,6.16e-07,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,4.91413608338813,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38854272215878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7783536559281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,2.52106183383116,2.47247575143499,3.03315947343832,0,0,0,0,0,0,0,0,0,0,0,0.630445658393585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71553711344522,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0,0,0.463044948647668,0.218559560503957,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,4.91413608338813,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38854272215878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7783536559281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,2.52106183383116,2.47247575143499,3.03315947343832,0,0,0,0,0,0,0,0,0,0,0,0.630445658393585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71553711344522,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0,0,0.463044948647668,0.218559560503957,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:97216132..97216143,+ | |short_description=p@chr2:97216132..97216143,+ | ||
}} | }} | ||
Revision as of 13:14, 19 November 2012
| Short description: | p@chr2:97216132..97216143, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr2:97216132..97216143, + |
| Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hepatocyte | 1.49e-72 | 12 |
| endodermal cell | 6.74e-15 | 58 |
| Ontology term | p-value | n |
|---|---|---|
| disease of anatomical entity | 1.13e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
