FFCP PHASE1:Hg19::chr1:209979375..209979386,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3664 | |EntrezGene=3664 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6121 | |HGNC=6121 | ||
|TSSclassifier=S | |||
|UniProt=O14896 | |UniProt=O14896 | ||
|association_with_transcript=2bp_to_ENST00000367021_5end | |association_with_transcript=2bp_to_ENST00000367021_5end | ||
Revision as of 22:45, 5 July 2013
| Short description: | p4@IRF6 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_IRF6_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 2bp_to_ENST00000367021_5end |
| EntrezGene: | IRF6 |
| HGNC: | 6121 |
| UniProt: | O14896 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@IRF6 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endo-epithelial cell | 2.66e-39 | 42 |
| endodermal cell | 4.32e-29 | 58 |
| epithelial cell | 8.65e-27 | 253 |
| respiratory epithelial cell | 9.65e-24 | 13 |
| general ecto-epithelial cell | 3.78e-23 | 14 |
| epithelial cell of alimentary canal | 5.18e-21 | 20 |
| transitional epithelial cell | 3.99e-15 | 4 |
| urothelial cell | 3.99e-15 | 4 |
| epithelial cell of tracheobronchial tree | 1.11e-12 | 9 |
| epithelial cell of lower respiratory tract | 1.11e-12 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| urothelium | 8.68e-18 | 5 |
| mouth mucosa | 6.08e-15 | 13 |
| transitional epithelium | 9.22e-15 | 6 |
| surface structure | 1.32e-14 | 99 |
| oral opening | 8.47e-13 | 22 |
| mucosa of oral region | 8.55e-13 | 4 |
| respiratory system mucosa | 8.55e-13 | 4 |
| respiratory system | 1.19e-12 | 74 |
| orifice | 2.09e-12 | 36 |
| mucosa | 1.37e-11 | 20 |
| Ontology term | p-value | n |
|---|---|---|
| squamous cell carcinoma | 7.80e-21 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
