FFCP PHASE1:Hg19::chr5:63256975..63257005,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3350 | |EntrezGene=3350 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5286 | |HGNC=5286 | ||
|TSSclassifier=S | |||
|UniProt=A0N5V3 | |UniProt=A0N5V3 | ||
|association_with_transcript=-33bp_to_S64045_5end | |association_with_transcript=-33bp_to_S64045_5end | ||
Revision as of 23:43, 9 July 2013
| Short description: | p1@HTR1A |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_HTR1A_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | -33bp_to_S64045_5end |
| EntrezGene: | HTR1A |
| HGNC: | 5286 |
| UniProt: | A0N5V3 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@HTR1A |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| regional part of cerebral cortex | 9.32e-113 | 22 |
| cerebral cortex | 2.26e-99 | 25 |
| pallium | 2.26e-99 | 25 |
| neocortex | 1.04e-98 | 20 |
| cerebral hemisphere | 4.03e-95 | 32 |
| telencephalon | 1.74e-89 | 34 |
| regional part of telencephalon | 3.67e-86 | 32 |
| brain grey matter | 4.82e-81 | 34 |
| gray matter | 4.82e-81 | 34 |
| regional part of forebrain | 5.56e-74 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
