Personal tools

FFCP PHASE1:Hg19::chr10:105668282..105668301,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C7|description=CAGE_peak_at_chr10:105668282..105668301,+|id=chr10:105668282..105668301,+|ontology_enrichment_celltype=CL:0002057!4.63e-14!42;CL:0000860!8.71e-13!45;CL:0002594!5.90e-10!4;CL:0002194!1.11e-09!63;CL:0000576!1.11e-09!63;CL:0000040!1.11e-09!63;CL:0000559!1.11e-09!63;CL:0002009!3.15e-09!65;CL:0000766!3.36e-09!76;CL:0000839!3.23e-08!70;CL:0000557!4.94e-08!71;CL:0000048!1.13e-07!430;CL:0000723!2.37e-07!436;CL:0000034!6.12e-07!444|ontology_enrichment_celltype_v019=CL:0000860;2.23e-39;33!CL:0002057;2.23e-39;33!CL:0000473;1.19e-28;39!CL:0000234;1.19e-28;39!CL:0000576;1.86e-22;48!CL:0002262;3.42e-10;2!CL:1000398;3.42e-10;2!CL:0000766;1.27e-09;69|ontology_enrichment_celltype_v019_2=CL:0000860,2.97e-34,42;CL:0002057,2.97e-34,42;CL:0000473,6.30e-30,48;CL:0000234,6.30e-30,48;CL:0002194,7.34e-24,59;CL:0000576,7.34e-24,59;CL:0000040,7.34e-24,59;CL:0000559,7.34e-24,59;CL:0002009,4.46e-23,61;CL:0000839,2.54e-21,66;CL:0000557,5.32e-21,67;CL:0000766,1.57e-19,72;CL:0000763,6.65e-13,108;CL:0000049,6.65e-13,108;CL:0002087,4.34e-12,115;CL:0002031,1.45e-11,120;CL:0002262,3.27e-10,2;CL:1000398,3.27e-10,2;CL:0000738,3.86e-10,136;CL:0002032,1.80e-08,161;CL:0000837,1.80e-08,161;CL:0000037,4.31e-08,168;CL:0000988,1.20e-07,177|ontology_enrichment_development_v019=CL:0002057;2.68e-26;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001310!5.90e-10!4;UBERON:0003081!7.27e-09!216;UBERON:0002204!9.75e-09!167;UBERON:0002390!2.19e-08!102;UBERON:0003061!2.19e-08!102;UBERON:0002371!2.26e-08!80;UBERON:0001474!3.37e-08!86;UBERON:0002193!4.43e-07!112|ontology_enrichment_uberon_v019=UBERON:0001281;3.42e-10;2!UBERON:0003497;3.42e-10;2!UBERON:0003909;3.42e-10;2!UBERON:0003835;3.42e-10;2!UBERON:0001280;3.25e-07;3!UBERON:0004647;3.25e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.22e-23,76;UBERON:0001474,4.00e-21,82;UBERON:0004765,3.21e-19,90;UBERON:0002405,1.37e-18,93;UBERON:0002390,1.27e-17,98;UBERON:0003061,1.27e-17,98;UBERON:0001434,2.92e-17,100;UBERON:0002193,5.97e-16,108;UBERON:0001281,3.27e-10,2;UBERON:0003497,3.27e-10,2;UBERON:0003909,3.27e-10,2;UBERON:0003835,3.27e-10,2;UBERON:0002204,4.09e-10,167;UBERON:0003081,4.95e-10,203;UBERON:0001280,3.16e-07,3;UBERON:0004647,3.16e-07,3;UBERON:0005171,3.16e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0.257575567634187,0.436194716338694,0,0,0,0,0,7.76769459269806,4.35473201099471,3.78371567821736,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,5.27762080298746,3.59034583718937,2.13112375266347,0,0,0,4.77372463987812,5.73631210262222,9.77349801173025,0,0.368277635987565,0.316462387440884,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.328875809207352,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0.596287222100115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.23486899728753,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0.405820753925408,0.6196469961995,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576219191952599,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0.147855149989634,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0|short_description=p@chr10:105668282..105668301,+}}
|DPIdataset=robustDPI
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=N
|UniProt=NA
|association_with_transcript=NA
|coexpression_cluster_id=C7
|description=CAGE_peak_at_chr10:105668282..105668301,+
|id=chr10:105668282..105668301,+
|ontology_enrichment_celltype=CL:0002057!4.63e-14!42;CL:0000860!8.71e-13!45;CL:0002594!5.90e-10!4;CL:0002194!1.11e-09!63;CL:0000576!1.11e-09!63;CL:0000040!1.11e-09!63;CL:0000559!1.11e-09!63;CL:0002009!3.15e-09!65;CL:0000766!3.36e-09!76;CL:0000839!3.23e-08!70;CL:0000557!4.94e-08!71;CL:0000048!1.13e-07!430;CL:0000723!2.37e-07!436;CL:0000034!6.12e-07!444
|ontology_enrichment_celltype_v019=CL:0000860;2.23e-39;33!CL:0002057;2.23e-39;33!CL:0000473;1.19e-28;39!CL:0000234;1.19e-28;39!CL:0000576;1.86e-22;48!CL:0002262;3.42e-10;2!CL:1000398;3.42e-10;2!CL:0000766;1.27e-09;69
|ontology_enrichment_celltype_v019_2=CL:0000860,2.97e-34,42;CL:0002057,2.97e-34,42;CL:0000473,6.30e-30,48;CL:0000234,6.30e-30,48;CL:0002194,7.34e-24,59;CL:0000576,7.34e-24,59;CL:0000040,7.34e-24,59;CL:0000559,7.34e-24,59;CL:0002009,4.46e-23,61;CL:0000839,2.54e-21,66;CL:0000557,5.32e-21,67;CL:0000766,1.57e-19,72;CL:0000763,6.65e-13,108;CL:0000049,6.65e-13,108;CL:0002087,4.34e-12,115;CL:0002031,1.45e-11,120;CL:0002262,3.27e-10,2;CL:1000398,3.27e-10,2;CL:0000738,3.86e-10,136;CL:0002032,1.80e-08,161;CL:0000837,1.80e-08,161;CL:0000037,4.31e-08,168;CL:0000988,1.20e-07,177
|ontology_enrichment_development_v019=CL:0002057;2.68e-26;42
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001310!5.90e-10!4;UBERON:0003081!7.27e-09!216;UBERON:0002204!9.75e-09!167;UBERON:0002390!2.19e-08!102;UBERON:0003061!2.19e-08!102;UBERON:0002371!2.26e-08!80;UBERON:0001474!3.37e-08!86;UBERON:0002193!4.43e-07!112
|ontology_enrichment_uberon_v019=UBERON:0001281;3.42e-10;2!UBERON:0003497;3.42e-10;2!UBERON:0003909;3.42e-10;2!UBERON:0003835;3.42e-10;2!UBERON:0001280;3.25e-07;3!UBERON:0004647;3.25e-07;3
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.22e-23,76;UBERON:0001474,4.00e-21,82;UBERON:0004765,3.21e-19,90;UBERON:0002405,1.37e-18,93;UBERON:0002390,1.27e-17,98;UBERON:0003061,1.27e-17,98;UBERON:0001434,2.92e-17,100;UBERON:0002193,5.97e-16,108;UBERON:0001281,3.27e-10,2;UBERON:0003497,3.27e-10,2;UBERON:0003909,3.27e-10,2;UBERON:0003835,3.27e-10,2;UBERON:0002204,4.09e-10,167;UBERON:0003081,4.95e-10,203;UBERON:0001280,3.16e-07,3;UBERON:0004647,3.16e-07,3;UBERON:0005171,3.16e-07,3
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0.257575567634187,0.436194716338694,0,0,0,0,0,7.76769459269806,4.35473201099471,3.78371567821736,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,5.27762080298746,3.59034583718937,2.13112375266347,0,0,0,4.77372463987812,5.73631210262222,9.77349801173025,0,0.368277635987565,0.316462387440884,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.328875809207352,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0.596287222100115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.23486899728753,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0.405820753925408,0.6196469961995,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576219191952599,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0.147855149989634,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0
|short_description=p@chr10:105668282..105668301,+
}}

Revision as of 11:33, 10 September 2013

Short description:p@chr10:105668282..105668301, +
Species:Human (Homo sapiens)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr10:105668282..105668301, +
Coexpression cluster:C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
2
4
6
8
10




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data









Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.