FFCP PHASE1:Hg19::chr10:15762274..15762283,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8516|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6144|TSSclassifier=S|UniProt=P53708|association_with_transcript=-150bp_to_ENST00000378076_5end|coexpression_cluster_id=C230|description=CAGE_peak_12_at_ITGA8_5end|id=chr10:15762274..15762283,-|ontology_enrichment_celltype=CL:0000708!5.57e-11!3|ontology_enrichment_celltype_v019=CL:0000708;1.83e-14;3!CL:0002563;3.42e-11;4|ontology_enrichment_celltype_v019_2=CL:0000708,2.09e-14,3;CL:0002563,3.42e-11,4|ontology_enrichment_development_v019=UBERON:0004874;2.21e-40;1!UBERON:0006965;3.11e-21;2!UBERON:0005062;2.80e-11;4!UBERON:0007284;2.80e-11;4!UBERON:0004872;5.08e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.86e-16!115;UBERON:0003210!5.57e-11!3;UBERON:0000200!1.19e-08!6;UBERON:0001950!1.29e-08!20;UBERON:0001049!4.35e-08!57;UBERON:0005068!4.35e-08!57;UBERON:0006241!4.35e-08!57;UBERON:0007135!4.35e-08!57;UBERON:0002619!9.28e-08!22;UBERON:0002616!1.01e-07!59;UBERON:0000955!3.76e-07!69;UBERON:0006238!3.76e-07!69;UBERON:0003075!4.21e-07!86;UBERON:0007284!4.21e-07!86;UBERON:0003080!4.45e-07!42;UBERON:0005743!6.11e-07!86;UBERON:0001871!7.41e-07!7|ontology_enrichment_uberon_v019=UBERON:0002146;9.91e-41;1!UBERON:0005623;9.91e-41;1!UBERON:0000989;2.21e-40;1!UBERON:0008811;2.21e-40;1!UBERON:0003978;1.40e-14;3!UBERON:0000946;1.40e-14;3!UBERON:0003210;1.83e-14;3!UBERON:0001242;3.42e-11;4!UBERON:0001262;3.42e-11;4!UBERON:0004786;3.42e-11;4!UBERON:0004808;3.42e-11;4!UBERON:0001277;3.42e-11;4!UBERON:0000485;6.04e-07;7!UBERON:0003929;6.04e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0002146,9.91e-41,1;UBERON:0005623,9.91e-41,1;UBERON:0000989,1.48e-40,1;UBERON:0008811,1.48e-40,1;UBERON:0006258,1.48e-40,1;UBERON:0005876,1.48e-40,1;UBERON:0004874,1.48e-40,1;UBERON:0003978,1.40e-14,3;UBERON:0009751,1.40e-14,3;UBERON:0000946,1.40e-14,3;UBERON:0002523,1.40e-14,3;UBERON:0005983,1.40e-14,3;UBERON:0002165,1.40e-14,3;UBERON:0002062,1.40e-14,3;UBERON:0007280,1.40e-14,3;UBERON:0003210,2.09e-14,3;UBERON:0001242,3.42e-11,4;UBERON:0001262,3.42e-11,4;UBERON:0004786,3.42e-11,4;UBERON:0004808,3.42e-11,4;UBERON:0001277,3.42e-11,4;UBERON:0004797,5.38e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0.612975591598039,0.150238058906597,0,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,1.30788020649984,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.57894367102995,0,0,0,0,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,2.52076466412852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,1.8374728641192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,1.98484471355718,0,0,0.535701835878287,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.285906176706625,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0.473314686579554,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.12729431655633,0.202117188958219,0,0,0,0.215166616178029,0,0,0,0,0,0,0.244482888365733,0,0,0.402547587182052,0|short_description=p12@ITGA8}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8516 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6144 | |||
|TSSclassifier=S | |||
|UniProt=P53708 | |||
|association_with_transcript=-150bp_to_ENST00000378076_5end | |||
|coexpression_cluster_id=C230 | |||
|description=CAGE_peak_12_at_ITGA8_5end | |||
|id=chr10:15762274..15762283,- | |||
|ontology_enrichment_celltype=CL:0000708!5.57e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0000708;1.83e-14;3!CL:0002563;3.42e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,2.09e-14,3;CL:0002563,3.42e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.21e-40;1!UBERON:0006965;3.11e-21;2!UBERON:0005062;2.80e-11;4!UBERON:0007284;2.80e-11;4!UBERON:0004872;5.08e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.86e-16!115;UBERON:0003210!5.57e-11!3;UBERON:0000200!1.19e-08!6;UBERON:0001950!1.29e-08!20;UBERON:0001049!4.35e-08!57;UBERON:0005068!4.35e-08!57;UBERON:0006241!4.35e-08!57;UBERON:0007135!4.35e-08!57;UBERON:0002619!9.28e-08!22;UBERON:0002616!1.01e-07!59;UBERON:0000955!3.76e-07!69;UBERON:0006238!3.76e-07!69;UBERON:0003075!4.21e-07!86;UBERON:0007284!4.21e-07!86;UBERON:0003080!4.45e-07!42;UBERON:0005743!6.11e-07!86;UBERON:0001871!7.41e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002146;9.91e-41;1!UBERON:0005623;9.91e-41;1!UBERON:0000989;2.21e-40;1!UBERON:0008811;2.21e-40;1!UBERON:0003978;1.40e-14;3!UBERON:0000946;1.40e-14;3!UBERON:0003210;1.83e-14;3!UBERON:0001242;3.42e-11;4!UBERON:0001262;3.42e-11;4!UBERON:0004786;3.42e-11;4!UBERON:0004808;3.42e-11;4!UBERON:0001277;3.42e-11;4!UBERON:0000485;6.04e-07;7!UBERON:0003929;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,9.91e-41,1;UBERON:0005623,9.91e-41,1;UBERON:0000989,1.48e-40,1;UBERON:0008811,1.48e-40,1;UBERON:0006258,1.48e-40,1;UBERON:0005876,1.48e-40,1;UBERON:0004874,1.48e-40,1;UBERON:0003978,1.40e-14,3;UBERON:0009751,1.40e-14,3;UBERON:0000946,1.40e-14,3;UBERON:0002523,1.40e-14,3;UBERON:0005983,1.40e-14,3;UBERON:0002165,1.40e-14,3;UBERON:0002062,1.40e-14,3;UBERON:0007280,1.40e-14,3;UBERON:0003210,2.09e-14,3;UBERON:0001242,3.42e-11,4;UBERON:0001262,3.42e-11,4;UBERON:0004786,3.42e-11,4;UBERON:0004808,3.42e-11,4;UBERON:0001277,3.42e-11,4;UBERON:0004797,5.38e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0.612975591598039,0.150238058906597,0,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,1.30788020649984,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.57894367102995,0,0,0,0,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,2.52076466412852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,1.8374728641192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,1.98484471355718,0,0,0.535701835878287,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.285906176706625,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0.473314686579554,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.12729431655633,0.202117188958219,0,0,0,0.215166616178029,0,0,0,0,0,0,0.244482888365733,0,0,0.402547587182052,0 | |||
|short_description=p12@ITGA8 | |||
}} |
Revision as of 12:37, 10 September 2013
Short description: | p12@ITGA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_ITGA8_5end |
Coexpression cluster: | C230_aorta_normal_heart_penis_osteosarcoma_basal_lung |
Association with transcript: | -150bp_to_ENST00000378076_5end |
EntrezGene: | ITGA8 |
HGNC: | 6144 |
UniProt: | P53708 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 2.09e-14 | 3 |
intestinal epithelial cell | 3.42e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 9.91e-41 | 1 |
semi-lunar valve | 9.91e-41 | 1 |
penis | 1.48e-40 | 1 |
intromittent organ | 1.48e-40 | 1 |
lateral plate mesenchyme | 1.48e-40 | 1 |
undifferentiated genital tubercle | 1.48e-40 | 1 |
somatopleure | 1.48e-40 | 1 |
valve | 1.40e-14 | 3 |
cardiac mesenchyme | 1.40e-14 | 3 |
cardial valve | 1.40e-14 | 3 |
tunica intima | 1.40e-14 | 3 |
heart layer | 1.40e-14 | 3 |
endocardium | 1.40e-14 | 3 |
endocardial cushion | 1.40e-14 | 3 |
presumptive endocardium | 1.40e-14 | 3 |
blood-cerebrospinal fluid barrier | 2.09e-14 | 3 |
intestinal mucosa | 3.42e-11 | 4 |
wall of intestine | 3.42e-11 | 4 |
gastrointestinal system mucosa | 3.42e-11 | 4 |
gastrointestinal system epithelium | 3.42e-11 | 4 |
intestinal epithelium | 3.42e-11 | 4 |
blood vessel layer | 5.38e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.