FFCP PHASE1:Hg19::chr10:76986231..76986237,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:76986231..76986237,+|id=chr10:76986231..76986237,+|ontology_enrichment_celltype=CL:0000037!1.25e-10!172;CL:0000566!1.25e-10!172;CL:0000988!3.06e-10!182;CL:0000738!2.59e-09!140;CL:0002032!4.14e-09!165;CL:0000837!4.14e-09!165;CL:0002087!6.11e-08!119;CL:0000763!4.82e-07!112;CL:0000049!4.82e-07!112|ontology_enrichment_celltype_v019=CL:0000623;2.59e-20;3!CL:0000771;2.90e-14;2!CL:0000226;9.91e-10;3!CL:0000842;9.91e-10;3!CL:0000791;3.88e-09;18!CL:0000789;3.88e-09;18!CL:0002419;3.88e-09;18!CL:0000094;6.48e-08;8|ontology_enrichment_celltype_v019_2=CL:0000623,1.03e-20,3;CL:0000825,1.03e-20,3;CL:0000771,2.31e-14,2;CL:0000738,1.83e-13,136;CL:0000037,1.70e-11,168;CL:0000988,1.04e-10,177;CL:0002087,9.69e-10,115;CL:0000226,1.50e-09,3;CL:0000842,1.50e-09,3;CL:0000791,3.13e-09,18;CL:0000789,3.13e-09,18;CL:0002420,3.13e-09,18;CL:0002419,3.13e-09,18;CL:0000790,3.13e-09,18;CL:0000838,6.10e-09,52;CL:0000542,9.58e-09,53;CL:0000051,9.58e-09,53;CL:0002032,2.68e-08,161;CL:0000837,2.68e-08,161;CL:0000094,5.24e-08,8|ontology_enrichment_development_v019=CL:0000790;3.88e-09;18|ontology_enrichment_disease=DOID:162!4.09e-12!235;DOID:14566!8.38e-12!239;DOID:0050687!1.15e-08!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001389;1.00e-07;1!UBERON:0000026;1.00e-07;1!UBERON:0008784;1.00e-07;1!UBERON:0006058;1.00e-07;1!UBERON:0003663;1.00e-07;1!UBERON:0004256;1.00e-07;1!UBERON:0004708;1.00e-07;1!UBERON:0002101;1.00e-07;1!UBERON:0004709;1.00e-07;1!UBERON:0002529;1.00e-07;1!UBERON:0010538;1.00e-07;1!UBERON:0003661;1.00e-07;1!UBERON:0010890;1.00e-07;1!UBERON:0002471;1.00e-07;1!UBERON:0001383;1.00e-07;1!UBERON:0010758;1.00e-07;1!UBERON:0010707;1.00e-07;1!UBERON:0000978;1.00e-07;1!UBERON:0002103;1.00e-07;1!UBERON:0001665;1.00e-07;1!UBERON:0003823;1.00e-07;1!UBERON:0000154;1.00e-07;1!UBERON:0010709;1.00e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0005418,9.72e-08,1;UBERON:0001389,9.72e-08,1;UBERON:0000026,9.72e-08,1;UBERON:0008784,9.72e-08,1;UBERON:0006058,9.72e-08,1;UBERON:0003663,9.72e-08,1;UBERON:0004256,9.72e-08,1;UBERON:0004708,9.72e-08,1;UBERON:0002101,9.72e-08,1;UBERON:0004709,9.72e-08,1;UBERON:0002529,9.72e-08,1;UBERON:0010538,9.72e-08,1;UBERON:0003661,9.72e-08,1;UBERON:0010890,9.72e-08,1;UBERON:0002471,9.72e-08,1;UBERON:0001383,9.72e-08,1;UBERON:0004357,9.72e-08,1;UBERON:0004347,9.72e-08,1;UBERON:0005420,9.72e-08,1;UBERON:0005732,9.72e-08,1;UBERON:0010758,9.72e-08,1;UBERON:0010707,9.72e-08,1;UBERON:0000978,9.72e-08,1;UBERON:0002103,9.72e-08,1;UBERON:0001665,9.72e-08,1;UBERON:0003823,9.72e-08,1;UBERON:0000154,9.72e-08,1;UBERON:0010709,9.72e-08,1;UBERON:0005733,9.72e-08,1;UBERON:0005730,9.72e-08,1|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.410623275218653,0.376627918784408,0.229240217243854,0.0821005894499457,0.708397031823113,0,0.383829398097213,0.464448369948228,0,0,0.369754010166788,0.46480320348181,0.853015394924529,0.293600439334847,1.66198622559563,3.60980005446255,0.868043482863407,0,0.32389366601898,0.257575567634187,0.581592955118259,0.377875943688809,0.242584061187816,0.697287110717054,0,0.309706370895104,0,0,0.236482229888585,0,0.645484683583826,0,0.376484679085209,0.545812300115692,0,0,0,0.639337125799041,0,0.598390972864896,0.852449501065388,0.290209238628584,0.56738522469114,0,0.502497330513487,1.0429658368404,0.434377689410233,0,0,0.316462387440884,0.211255286311942,0,0.419317291016752,0.673971786878971,0.300353785683013,0.32145117339416,0.855038231223746,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0.983548850569165,1.96505381374582,2.67281948699362,0.167186495390678,0,0,0,0.111410456885174,0.883817722424512,0.443067789167242,0,0.128091319725675,0.390178042679635,0,0.276350017785848,0.289803085735052,0.741432815810302,0,0,0.566546713487831,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,2.41928091869679,3.20928234940209,2.60683926989038,0,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0,0.087834785693126,0.261958150995425,0,0.370784442784429,0.324547393654683,0.174129737299267,0.132957960518865,0.476981248610684,0.571994910780128,0,0.198762407366705,0,0,0,0,0.550236083880135,0.208994966536811,0,0.71153252537342,0,0,0,0.488124115096339,0,0.81014194788176,0.267899184852239,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0,0.277064115484183,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0.600182192168805,0,0.515281080091258,0,0.843881661206331,0,0.252433774244115,0.0920498986422993,0.16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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:76986231..76986237,+ | |||
|id=chr10:76986231..76986237,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.25e-10!172;CL:0000566!1.25e-10!172;CL:0000988!3.06e-10!182;CL:0000738!2.59e-09!140;CL:0002032!4.14e-09!165;CL:0000837!4.14e-09!165;CL:0002087!6.11e-08!119;CL:0000763!4.82e-07!112;CL:0000049!4.82e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.59e-20;3!CL:0000771;2.90e-14;2!CL:0000226;9.91e-10;3!CL:0000842;9.91e-10;3!CL:0000791;3.88e-09;18!CL:0000789;3.88e-09;18!CL:0002419;3.88e-09;18!CL:0000094;6.48e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.03e-20,3;CL:0000825,1.03e-20,3;CL:0000771,2.31e-14,2;CL:0000738,1.83e-13,136;CL:0000037,1.70e-11,168;CL:0000988,1.04e-10,177;CL:0002087,9.69e-10,115;CL:0000226,1.50e-09,3;CL:0000842,1.50e-09,3;CL:0000791,3.13e-09,18;CL:0000789,3.13e-09,18;CL:0002420,3.13e-09,18;CL:0002419,3.13e-09,18;CL:0000790,3.13e-09,18;CL:0000838,6.10e-09,52;CL:0000542,9.58e-09,53;CL:0000051,9.58e-09,53;CL:0002032,2.68e-08,161;CL:0000837,2.68e-08,161;CL:0000094,5.24e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000790;3.88e-09;18 | |||
|ontology_enrichment_disease=DOID:162!4.09e-12!235;DOID:14566!8.38e-12!239;DOID:0050687!1.15e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.00e-07;1!UBERON:0000026;1.00e-07;1!UBERON:0008784;1.00e-07;1!UBERON:0006058;1.00e-07;1!UBERON:0003663;1.00e-07;1!UBERON:0004256;1.00e-07;1!UBERON:0004708;1.00e-07;1!UBERON:0002101;1.00e-07;1!UBERON:0004709;1.00e-07;1!UBERON:0002529;1.00e-07;1!UBERON:0010538;1.00e-07;1!UBERON:0003661;1.00e-07;1!UBERON:0010890;1.00e-07;1!UBERON:0002471;1.00e-07;1!UBERON:0001383;1.00e-07;1!UBERON:0010758;1.00e-07;1!UBERON:0010707;1.00e-07;1!UBERON:0000978;1.00e-07;1!UBERON:0002103;1.00e-07;1!UBERON:0001665;1.00e-07;1!UBERON:0003823;1.00e-07;1!UBERON:0000154;1.00e-07;1!UBERON:0010709;1.00e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,9.72e-08,1;UBERON:0001389,9.72e-08,1;UBERON:0000026,9.72e-08,1;UBERON:0008784,9.72e-08,1;UBERON:0006058,9.72e-08,1;UBERON:0003663,9.72e-08,1;UBERON:0004256,9.72e-08,1;UBERON:0004708,9.72e-08,1;UBERON:0002101,9.72e-08,1;UBERON:0004709,9.72e-08,1;UBERON:0002529,9.72e-08,1;UBERON:0010538,9.72e-08,1;UBERON:0003661,9.72e-08,1;UBERON:0010890,9.72e-08,1;UBERON:0002471,9.72e-08,1;UBERON:0001383,9.72e-08,1;UBERON:0004357,9.72e-08,1;UBERON:0004347,9.72e-08,1;UBERON:0005420,9.72e-08,1;UBERON:0005732,9.72e-08,1;UBERON:0010758,9.72e-08,1;UBERON:0010707,9.72e-08,1;UBERON:0000978,9.72e-08,1;UBERON:0002103,9.72e-08,1;UBERON:0001665,9.72e-08,1;UBERON:0003823,9.72e-08,1;UBERON:0000154,9.72e-08,1;UBERON:0010709,9.72e-08,1;UBERON:0005733,9.72e-08,1;UBERON:0005730,9.72e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.410623275218653,0.376627918784408,0.229240217243854,0.0821005894499457,0.708397031823113,0,0.383829398097213,0.464448369948228,0,0,0.369754010166788,0.46480320348181,0.853015394924529,0.293600439334847,1.66198622559563,3.60980005446255,0.868043482863407,0,0.32389366601898,0.257575567634187,0.581592955118259,0.377875943688809,0.242584061187816,0.697287110717054,0,0.309706370895104,0,0,0.236482229888585,0,0.645484683583826,0,0.376484679085209,0.545812300115692,0,0,0,0.639337125799041,0,0.598390972864896,0.852449501065388,0.290209238628584,0.56738522469114,0,0.502497330513487,1.0429658368404,0.434377689410233,0,0,0.316462387440884,0.211255286311942,0,0.419317291016752,0.673971786878971,0.300353785683013,0.32145117339416,0.855038231223746,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0.983548850569165,1.96505381374582,2.67281948699362,0.167186495390678,0,0,0,0.111410456885174,0.883817722424512,0.443067789167242,0,0.128091319725675,0.390178042679635,0,0.276350017785848,0.289803085735052,0.741432815810302,0,0,0.566546713487831,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,2.41928091869679,3.20928234940209,2.60683926989038,0,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0,0.087834785693126,0.261958150995425,0,0.370784442784429,0.324547393654683,0.174129737299267,0.132957960518865,0.476981248610684,0.571994910780128,0,0.198762407366705,0,0,0,0,0.550236083880135,0.208994966536811,0,0.71153252537342,0,0,0,0.488124115096339,0,0.81014194788176,0.267899184852239,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0,0.277064115484183,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0.600182192168805,0,0.515281080091258,0,0.843881661206331,0,0.252433774244115,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,1.32438929824395,0.491953754172454,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0.205476322550383,0.358121926479791,0.336255431980582,1.37921532141349,4.31255149719035,1.79680250791648,0.254094624222463,1.30139853857622,0,0.167516265334349,0,1.49801404789436,0,0,0,0.500170521059677,0,0.207970861530807,0.356857977594324,0.788512075169673,0,0,0,0,0,0.184369168541703,0.347534457872331,0,0.343143423810856,0.413536052245775,2.15714200818617,1.06727557803444,0,0,0,0.248107807818777,0.460385919864187,0,0.128139149255701,0,0,0,0.462629081407967,0,0.0821271560138091,0,0,0.604297247958111,0.40101294060657,0.184161977871793,0.114814448164607,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.183138929636687,0.247528499761764,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0,0.178064071293475,0,0,0.382838137483752,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0.731140468893853,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.192444225451024,0,0,0.470719003883896,0,0,0,0.459446800413919,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.185803175125719,0.432807638929335,0.355709216742071,0.478278818186467,0.997896857164083,0.191505370132367,0.635020748171649,0.324621940274555,0.842391534340376,0.456469358066384,0.47003968731907,0,0.338583555603207,0,0.80719882876419,1.27753871307098,0,0.307240764308458,0.671028323677248,0.166849141711909,0,0,0,0.540911356951966,0.33307196799782,0,0,0.146508179271894,0.36408156524854,0.334330152832435,0.852408440419239,0,0,0.307160702099232,0,0.281338832821026,0.222617410045812,0,1.05562704063997,0.597743964753209,0,0.251932747854276,0.20453736500431,0.738508832766417,0.311039587661807,0.269605053441981,0.716084698702437,0.511572370226872,0,2.3948309234694,0,0,0.278304294485554,0,0.260427761085233,0.174919999992391,0,0.341380344856499,0,0.472775363535873,0.689486746482929,0.583209226766509,0.173624994933292,0,0.482385754501632,0,0.442317039724898,0.886642856860642,0,0,0.697118721393016,0.692552326534174,0.113942055847001,0.46112780877612,0.448788222048861,0.434589487688032,0.31900115973192,0.0915975934018623,0,0,0.627921025580099,0.332423363800313,0,0.19606253431774,0.167821586975843,0.569261198172555,0,0.421996129056054,0,0.424059214301822,0.216388639742091,0,0.176915129006678,0,0.5930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| |||
|short_description=p@chr10:76986231..76986237,+ | |||
}} |
Revision as of 14:26, 10 September 2013
Short description: | p@chr10:76986231..76986237, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:76986231..76986237, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.03e-20 | 3 |
pro-NK cell | 1.03e-20 | 3 |
eosinophil | 2.31e-14 | 2 |
leukocyte | 1.83e-13 | 136 |
hematopoietic stem cell | 1.70e-11 | 168 |
hematopoietic cell | 1.04e-10 | 177 |
nongranular leukocyte | 9.69e-10 | 115 |
single nucleate cell | 1.50e-09 | 3 |
mononuclear cell | 1.50e-09 | 3 |
mature alpha-beta T cell | 3.13e-09 | 18 |
alpha-beta T cell | 3.13e-09 | 18 |
immature T cell | 3.13e-09 | 18 |
mature T cell | 3.13e-09 | 18 |
immature alpha-beta T cell | 3.13e-09 | 18 |
lymphoid lineage restricted progenitor cell | 6.10e-09 | 52 |
lymphocyte | 9.58e-09 | 53 |
common lymphoid progenitor | 9.58e-09 | 53 |
hematopoietic oligopotent progenitor cell | 2.68e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.68e-08 | 161 |
granulocyte | 5.24e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 9.72e-08 | 1 |
soleus muscle | 9.72e-08 | 1 |
appendage | 9.72e-08 | 1 |
lower limb segment | 9.72e-08 | 1 |
multi-limb segment region | 9.72e-08 | 1 |
hindlimb muscle | 9.72e-08 | 1 |
hindlimb zeugopod muscle | 9.72e-08 | 1 |
paired limb/fin | 9.72e-08 | 1 |
limb | 9.72e-08 | 1 |
pelvic appendage | 9.72e-08 | 1 |
limb segment | 9.72e-08 | 1 |
paired limb/fin segment | 9.72e-08 | 1 |
limb muscle | 9.72e-08 | 1 |
pelvic complex muscle | 9.72e-08 | 1 |
zeugopod | 9.72e-08 | 1 |
muscle of leg | 9.72e-08 | 1 |
paired limb/fin bud | 9.72e-08 | 1 |
limb bud | 9.72e-08 | 1 |
pelvic appendage bud | 9.72e-08 | 1 |
limb/fin field | 9.72e-08 | 1 |
subdivision of organism along appendicular axis | 9.72e-08 | 1 |
appendage girdle complex | 9.72e-08 | 1 |
leg | 9.72e-08 | 1 |
hindlimb | 9.72e-08 | 1 |
triceps surae | 9.72e-08 | 1 |
hindlimb zeugopod | 9.72e-08 | 1 |
posterior region of body | 9.72e-08 | 1 |
pelvic complex | 9.72e-08 | 1 |
limb field | 9.72e-08 | 1 |
hindlimb/pelvic fin field | 9.72e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.