FFCP PHASE1:Hg19::chr10:7745167..7745178,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3698|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6167|TSSclassifier=W|UniProt=P19823|association_with_transcript=-53bp_to_ENST00000358415_5end|coexpression_cluster_id=C5|description=CAGE_peak_3_at_ITIH2_5end|id=chr10:7745167..7745178,+|ontology_enrichment_celltype=CL:0000181!6.16e-43!12;CL:0000417!6.16e-43!12;CL:0000668!6.16e-43!12;CL:0000414!6.16e-43!12;CL:0000412!6.16e-43!12;CL:0000182!6.16e-43!12;CL:0000223!2.01e-13!59|ontology_enrichment_celltype_v019=CL:0000182;5.99e-73;12|ontology_enrichment_celltype_v019_2=CL:0000182,6.33e-73,12;CL:0000223,5.67e-15,58|ontology_enrichment_development_v019=UBERON:0004161;3.84e-58;11!UBERON:0009497;3.16e-49;13!UBERON:0001041;2.26e-21;30!UBERON:0003104;4.20e-20;31!CL:0000223;2.19e-10;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:7;2.82e-07;39|ontology_enrichment_disease_v019_2=DOID:7,1.07e-07,39|ontology_enrichment_uberon=UBERON:0002107!3.02e-44!19;UBERON:0006925!3.02e-44!19;UBERON:0008836!3.02e-44!19;UBERON:0008835!4.44e-38!22;UBERON:0003894!4.44e-38!22;UBERON:0009854!2.22e-36!23;UBERON:0007499!2.18e-33!25;UBERON:0009497!2.18e-33!25;UBERON:0000015!2.18e-33!25;UBERON:0002423!2.18e-33!25;UBERON:0006235!2.18e-33!25;UBERON:0004161!2.18e-33!25;UBERON:0005057!4.60e-32!26;UBERON:0009856!4.60e-32!26;UBERON:0002365!1.01e-26!31;UBERON:0002330!1.01e-26!31;UBERON:0002368!1.51e-23!35;UBERON:0003929!3.44e-22!54;UBERON:0000949!4.55e-18!45;UBERON:0005911!7.81e-17!82;UBERON:0002530!1.20e-16!59;UBERON:0005172!1.41e-14!55;UBERON:0005173!1.41e-14!55;UBERON:0002417!4.98e-13!61;UBERON:0000916!4.98e-13!61;UBERON:0002336!1.47e-11!1;UBERON:0001018!1.47e-11!1;UBERON:0002473!1.47e-11!1;UBERON:0005340!1.47e-11!1;UBERON:0002316!1.47e-11!1;UBERON:0003544!1.47e-11!1;UBERON:0001020!1.47e-11!1;UBERON:0005970!1.47e-11!1;UBERON:0002437!1.47e-11!1;UBERON:0002022!1.81e-11!1;UBERON:0004921!5.84e-10!129;UBERON:0004185!5.84e-10!129;UBERON:0001041!1.77e-09!98;UBERON:0005177!1.46e-08!107;UBERON:0000025!1.78e-08!194;UBERON:0000077!2.79e-08!130;UBERON:0009569!4.96e-08!113;UBERON:0001007!5.37e-08!155;UBERON:0001555!5.37e-08!155;UBERON:0007026!5.37e-08!155;UBERON:0000490!1.03e-07!138;UBERON:0004111!1.57e-07!241;UBERON:0004119!3.47e-07!169;UBERON:0000925!3.47e-07!169;UBERON:0006595!3.47e-07!169;UBERON:0000466!4.69e-07!126|ontology_enrichment_uberon_v019=UBERON:0002107;8.88e-76;19!UBERON:0006925;8.88e-76;19!UBERON:0002423;1.52e-57;25!UBERON:0002365;6.17e-45;31!UBERON:0002330;6.17e-45;31!UBERON:0002368;2.98e-39;33!UBERON:0000949;1.21e-24;43!UBERON:0005172;1.90e-17;52!UBERON:0005173;1.90e-17;52!UBERON:0002530;2.95e-14;57!UBERON:0002417;1.92e-12;58!UBERON:0000916;1.92e-12;58!UBERON:0001007;6.37e-09;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.69e-76,19;UBERON:0006925,9.69e-76,19;UBERON:0008836,9.69e-76,19;UBERON:0008835,2.18e-65,22;UBERON:0003894,2.18e-65,22;UBERON:0009854,1.55e-62,23;UBERON:0007499,1.63e-57,25;UBERON:0009497,1.63e-57,25;UBERON:0000015,1.63e-57,25;UBERON:0002423,1.63e-57,25;UBERON:0006235,1.63e-57,25;UBERON:0004161,1.63e-57,25;UBERON:0009856,2.70e-55,26;UBERON:0002365,2.46e-46,31;UBERON:0002330,2.46e-46,31;UBERON:0002368,5.25e-41,35;UBERON:0000949,8.07e-32,45;UBERON:0003929,1.88e-26,54;UBERON:0005172,1.88e-26,54;UBERON:0005173,1.88e-26,54;UBERON:0002530,3.56e-24,59;UBERON:0002417,9.15e-24,60;UBERON:0000916,9.15e-24,60;UBERON:0005911,2.91e-17,82;UBERON:0001041,3.06e-16,87;UBERON:0005177,6.49e-14,101;UBERON:0009569,1.72e-12,112;UBERON:0003914,6.23e-12,117;UBERON:0004921,1.01e-11,118;UBERON:0005256,2.03e-11,122;UBERON:0001007,1.95e-09,145;UBERON:0001555,1.95e-09,145;UBERON:0007026,1.95e-09,145;UBERON:0000490,2.67e-09,148;UBERON:0001048,1.50e-08,160;UBERON:0003104,1.50e-08,160;UBERON:0009142,1.50e-08,160;UBERON:0004119,1.71e-08,160;UBERON:0000925,1.71e-08,160;UBERON:0006595,1.71e-08,160;UBERON:0000025,5.76e-07,192;UBERON:0002100,9.84e-07,199|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9430538304014,22.6050259835854,7.08947888017685,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43076350085206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08376524194607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,4.01794229766841,3.95596120229599,4.24642326281365,8.2679084472389,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.06037285229453,1.32506888912221,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@ITIH2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3698 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6167 | |||
|TSSclassifier=W | |||
|UniProt=P19823 | |||
|association_with_transcript=-53bp_to_ENST00000358415_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_ITIH2_5end | |||
|id=chr10:7745167..7745178,+ | |||
|ontology_enrichment_celltype=CL:0000181!6.16e-43!12;CL:0000417!6.16e-43!12;CL:0000668!6.16e-43!12;CL:0000414!6.16e-43!12;CL:0000412!6.16e-43!12;CL:0000182!6.16e-43!12;CL:0000223!2.01e-13!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.99e-73;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.33e-73,12;CL:0000223,5.67e-15,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.84e-58;11!UBERON:0009497;3.16e-49;13!UBERON:0001041;2.26e-21;30!UBERON:0003104;4.20e-20;31!CL:0000223;2.19e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;2.82e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,1.07e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!3.02e-44!19;UBERON:0006925!3.02e-44!19;UBERON:0008836!3.02e-44!19;UBERON:0008835!4.44e-38!22;UBERON:0003894!4.44e-38!22;UBERON:0009854!2.22e-36!23;UBERON:0007499!2.18e-33!25;UBERON:0009497!2.18e-33!25;UBERON:0000015!2.18e-33!25;UBERON:0002423!2.18e-33!25;UBERON:0006235!2.18e-33!25;UBERON:0004161!2.18e-33!25;UBERON:0005057!4.60e-32!26;UBERON:0009856!4.60e-32!26;UBERON:0002365!1.01e-26!31;UBERON:0002330!1.01e-26!31;UBERON:0002368!1.51e-23!35;UBERON:0003929!3.44e-22!54;UBERON:0000949!4.55e-18!45;UBERON:0005911!7.81e-17!82;UBERON:0002530!1.20e-16!59;UBERON:0005172!1.41e-14!55;UBERON:0005173!1.41e-14!55;UBERON:0002417!4.98e-13!61;UBERON:0000916!4.98e-13!61;UBERON:0002336!1.47e-11!1;UBERON:0001018!1.47e-11!1;UBERON:0002473!1.47e-11!1;UBERON:0005340!1.47e-11!1;UBERON:0002316!1.47e-11!1;UBERON:0003544!1.47e-11!1;UBERON:0001020!1.47e-11!1;UBERON:0005970!1.47e-11!1;UBERON:0002437!1.47e-11!1;UBERON:0002022!1.81e-11!1;UBERON:0004921!5.84e-10!129;UBERON:0004185!5.84e-10!129;UBERON:0001041!1.77e-09!98;UBERON:0005177!1.46e-08!107;UBERON:0000025!1.78e-08!194;UBERON:0000077!2.79e-08!130;UBERON:0009569!4.96e-08!113;UBERON:0001007!5.37e-08!155;UBERON:0001555!5.37e-08!155;UBERON:0007026!5.37e-08!155;UBERON:0000490!1.03e-07!138;UBERON:0004111!1.57e-07!241;UBERON:0004119!3.47e-07!169;UBERON:0000925!3.47e-07!169;UBERON:0006595!3.47e-07!169;UBERON:0000466!4.69e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.88e-76;19!UBERON:0006925;8.88e-76;19!UBERON:0002423;1.52e-57;25!UBERON:0002365;6.17e-45;31!UBERON:0002330;6.17e-45;31!UBERON:0002368;2.98e-39;33!UBERON:0000949;1.21e-24;43!UBERON:0005172;1.90e-17;52!UBERON:0005173;1.90e-17;52!UBERON:0002530;2.95e-14;57!UBERON:0002417;1.92e-12;58!UBERON:0000916;1.92e-12;58!UBERON:0001007;6.37e-09;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.69e-76,19;UBERON:0006925,9.69e-76,19;UBERON:0008836,9.69e-76,19;UBERON:0008835,2.18e-65,22;UBERON:0003894,2.18e-65,22;UBERON:0009854,1.55e-62,23;UBERON:0007499,1.63e-57,25;UBERON:0009497,1.63e-57,25;UBERON:0000015,1.63e-57,25;UBERON:0002423,1.63e-57,25;UBERON:0006235,1.63e-57,25;UBERON:0004161,1.63e-57,25;UBERON:0009856,2.70e-55,26;UBERON:0002365,2.46e-46,31;UBERON:0002330,2.46e-46,31;UBERON:0002368,5.25e-41,35;UBERON:0000949,8.07e-32,45;UBERON:0003929,1.88e-26,54;UBERON:0005172,1.88e-26,54;UBERON:0005173,1.88e-26,54;UBERON:0002530,3.56e-24,59;UBERON:0002417,9.15e-24,60;UBERON:0000916,9.15e-24,60;UBERON:0005911,2.91e-17,82;UBERON:0001041,3.06e-16,87;UBERON:0005177,6.49e-14,101;UBERON:0009569,1.72e-12,112;UBERON:0003914,6.23e-12,117;UBERON:0004921,1.01e-11,118;UBERON:0005256,2.03e-11,122;UBERON:0001007,1.95e-09,145;UBERON:0001555,1.95e-09,145;UBERON:0007026,1.95e-09,145;UBERON:0000490,2.67e-09,148;UBERON:0001048,1.50e-08,160;UBERON:0003104,1.50e-08,160;UBERON:0009142,1.50e-08,160;UBERON:0004119,1.71e-08,160;UBERON:0000925,1.71e-08,160;UBERON:0006595,1.71e-08,160;UBERON:0000025,5.76e-07,192;UBERON:0002100,9.84e-07,199 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9430538304014,22.6050259835854,7.08947888017685,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43076350085206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08376524194607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,4.01794229766841,3.95596120229599,4.24642326281365,8.2679084472389,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.06037285229453,1.32506888912221,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@ITIH2 | |||
}} |
Revision as of 14:27, 10 September 2013
Short description: | p3@ITIH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ITIH2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -53bp_to_ENST00000358415_5end |
EntrezGene: | ITIH2 |
HGNC: | 6167 |
UniProt: | P19823 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.33e-73 | 12 |
endodermal cell | 5.67e-15 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 1.07e-07 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.