FFCP PHASE1:Hg19::chr11:75248394..75248403,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:75248394..75248403,+|id=chr11:75248394..75248403,+|ontology_enrichment_celltype=CL:0000860!1.55e-34!45;CL:0002087!8.11e-34!119;CL:0000738!1.14e-33!140;CL:0002031!4.85e-32!124;CL:0000037!1.84e-30!172;CL:0000566!1.84e-30!172;CL:0002057!3.10e-30!42;CL:0002032!1.29e-28!165;CL:0000837!1.29e-28!165;CL:0000988!8.39e-28!182;CL:0002009!4.86e-24!65;CL:0002194!1.99e-21!63;CL:0000576!1.99e-21!63;CL:0000040!1.99e-21!63;CL:0000559!1.99e-21!63;CL:0000557!3.34e-21!71;CL:0000766!1.54e-20!76;CL:0000839!7.87e-20!70;CL:0000763!2.46e-18!112;CL:0000049!2.46e-18!112;CL:0000838!5.58e-10!52;CL:0000542!1.08e-09!53;CL:0000051!1.08e-09!53;CL:0000063!2.47e-09!578;CL:0000134!5.41e-08!358;CL:0000623!8.87e-08!3;CL:0000825!8.87e-08!3;CL:0002320!1.53e-07!365;CL:0000945!1.73e-07!24;CL:0000826!1.73e-07!24;CL:0000767!8.06e-07!3|ontology_enrichment_celltype_v019=CL:0000860;1.36e-41;33!CL:0002057;1.36e-41;33!CL:0000473;1.37e-30;39!CL:0000234;1.37e-30;39!CL:0000623;1.55e-29;3!CL:0000576;3.04e-21;48!CL:0000766;1.32e-10;69!CL:0002087;6.15e-09;104|ontology_enrichment_celltype_v019_2=CL:0000860,5.53e-36,42;CL:0002057,5.53e-36,42;CL:0000473,3.04e-31,48;CL:0000234,3.04e-31,48;CL:0000623,1.00e-29,3;CL:0000825,1.00e-29,3;CL:0002009,1.20e-27,61;CL:0002031,1.54e-25,120;CL:0000557,5.10e-25,67;CL:0002194,1.34e-24,59;CL:0000576,1.34e-24,59;CL:0000040,1.34e-24,59;CL:0000559,1.34e-24,59;CL:0002087,7.92e-24,115;CL:0000738,3.08e-22,136;CL:0000839,8.06e-22,66;CL:0002032,1.18e-20,161;CL:0000837,1.18e-20,161;CL:0000766,7.35e-20,72;CL:0000037,1.11e-19,168;CL:0000988,1.53e-18,177;CL:0000763,3.52e-17,108;CL:0000049,3.52e-17,108;CL:0000134,8.38e-08,354;CL:0002320,1.36e-07,361;CL:0000219,7.62e-07,386|ontology_enrichment_development_v019=CL:0002057;2.71e-25;42!CL:0000049;6.31e-07;108|ontology_enrichment_disease=DOID:305!2.12e-09!106|ontology_enrichment_disease_v019=DOID:4960;4.35e-11;1!DOID:0070004;4.35e-11;1|ontology_enrichment_disease_v019_2=DOID:4960,5.05e-11,1;DOID:0070004,5.05e-11,1|ontology_enrichment_uberon=UBERON:0002371!2.91e-19!80;UBERON:0002390!2.26e-17!102;UBERON:0003061!2.26e-17!102;UBERON:0001474!3.03e-17!86;UBERON:0002193!6.98e-15!112;UBERON:0004765!2.74e-13!101;UBERON:0001434!2.74e-13!101;UBERON:0002405!3.31e-12!115;UBERON:0002294!2.26e-09!7;UBERON:0001173!2.26e-09!7;UBERON:0004912!2.26e-09!7;UBERON:0002384!6.22e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.80e-25,76;UBERON:0001474,2.77e-23,82;UBERON:0004765,4.95e-21,90;UBERON:0002405,2.76e-20,93;UBERON:0002390,3.84e-19,98;UBERON:0003061,3.84e-19,98;UBERON:0001434,1.02e-18,100;UBERON:0002193,3.61e-17,108;UBERON:0002204,2.75e-10,167;UBERON:0003081,4.91e-08,203;UBERON:0002384,2.65e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.314843125254717,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0,0,0.142169232487422,0,0.553995408531877,0.601633342410425,0.651032612147555,0,0,0,0.145398238779565,0.755751887377619,0,0.929716147622738,1.6446715520873,0.929119112685311,1.43846196161075,0.768482119587302,2.36482229888585,3.10271112662957,4.51839278508678,1.35426486594342,0.188242339542605,0.545812300115692,0,1.53041946185451,0,0.639337125799041,0,0.398927315243264,0,1.16083695451434,0,1.24564449799115,1.00499466102697,4.17186334736161,1.73751075764093,0.605399502633369,1.10483290796269,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0.587237189370939,0.382273228125229,0,1.68152568894461,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0.589211814949674,0,0,0.512365278902701,0.520237390239513,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,1.06976078313403,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0.435758888184812,0,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,1.57624608161542,2.58753089831421,4.2353201972317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.862856803274467,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50565556505718,0,0,0,0,0.18714054040822,0,0,0.334330152832435,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0.24616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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:75248394..75248403,+ | |||
|id=chr11:75248394..75248403,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.55e-34!45;CL:0002087!8.11e-34!119;CL:0000738!1.14e-33!140;CL:0002031!4.85e-32!124;CL:0000037!1.84e-30!172;CL:0000566!1.84e-30!172;CL:0002057!3.10e-30!42;CL:0002032!1.29e-28!165;CL:0000837!1.29e-28!165;CL:0000988!8.39e-28!182;CL:0002009!4.86e-24!65;CL:0002194!1.99e-21!63;CL:0000576!1.99e-21!63;CL:0000040!1.99e-21!63;CL:0000559!1.99e-21!63;CL:0000557!3.34e-21!71;CL:0000766!1.54e-20!76;CL:0000839!7.87e-20!70;CL:0000763!2.46e-18!112;CL:0000049!2.46e-18!112;CL:0000838!5.58e-10!52;CL:0000542!1.08e-09!53;CL:0000051!1.08e-09!53;CL:0000063!2.47e-09!578;CL:0000134!5.41e-08!358;CL:0000623!8.87e-08!3;CL:0000825!8.87e-08!3;CL:0002320!1.53e-07!365;CL:0000945!1.73e-07!24;CL:0000826!1.73e-07!24;CL:0000767!8.06e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-41;33!CL:0002057;1.36e-41;33!CL:0000473;1.37e-30;39!CL:0000234;1.37e-30;39!CL:0000623;1.55e-29;3!CL:0000576;3.04e-21;48!CL:0000766;1.32e-10;69!CL:0002087;6.15e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.53e-36,42;CL:0002057,5.53e-36,42;CL:0000473,3.04e-31,48;CL:0000234,3.04e-31,48;CL:0000623,1.00e-29,3;CL:0000825,1.00e-29,3;CL:0002009,1.20e-27,61;CL:0002031,1.54e-25,120;CL:0000557,5.10e-25,67;CL:0002194,1.34e-24,59;CL:0000576,1.34e-24,59;CL:0000040,1.34e-24,59;CL:0000559,1.34e-24,59;CL:0002087,7.92e-24,115;CL:0000738,3.08e-22,136;CL:0000839,8.06e-22,66;CL:0002032,1.18e-20,161;CL:0000837,1.18e-20,161;CL:0000766,7.35e-20,72;CL:0000037,1.11e-19,168;CL:0000988,1.53e-18,177;CL:0000763,3.52e-17,108;CL:0000049,3.52e-17,108;CL:0000134,8.38e-08,354;CL:0002320,1.36e-07,361;CL:0000219,7.62e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.71e-25;42!CL:0000049;6.31e-07;108 | |||
|ontology_enrichment_disease=DOID:305!2.12e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:4960;4.35e-11;1!DOID:0070004;4.35e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,5.05e-11,1;DOID:0070004,5.05e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.91e-19!80;UBERON:0002390!2.26e-17!102;UBERON:0003061!2.26e-17!102;UBERON:0001474!3.03e-17!86;UBERON:0002193!6.98e-15!112;UBERON:0004765!2.74e-13!101;UBERON:0001434!2.74e-13!101;UBERON:0002405!3.31e-12!115;UBERON:0002294!2.26e-09!7;UBERON:0001173!2.26e-09!7;UBERON:0004912!2.26e-09!7;UBERON:0002384!6.22e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.80e-25,76;UBERON:0001474,2.77e-23,82;UBERON:0004765,4.95e-21,90;UBERON:0002405,2.76e-20,93;UBERON:0002390,3.84e-19,98;UBERON:0003061,3.84e-19,98;UBERON:0001434,1.02e-18,100;UBERON:0002193,3.61e-17,108;UBERON:0002204,2.75e-10,167;UBERON:0003081,4.91e-08,203;UBERON:0002384,2.65e-07,371 | |||
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|short_description=p@chr11:75248394..75248403,+ | |||
}} |
Revision as of 19:42, 10 September 2013
Short description: | p@chr11:75248394..75248403, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:75248394..75248403, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.53e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.53e-36 | 42 |
defensive cell | 3.04e-31 | 48 |
phagocyte | 3.04e-31 | 48 |
natural killer cell | 1.00e-29 | 3 |
pro-NK cell | 1.00e-29 | 3 |
macrophage dendritic cell progenitor | 1.20e-27 | 61 |
hematopoietic lineage restricted progenitor cell | 1.54e-25 | 120 |
granulocyte monocyte progenitor cell | 5.10e-25 | 67 |
monopoietic cell | 1.34e-24 | 59 |
monocyte | 1.34e-24 | 59 |
monoblast | 1.34e-24 | 59 |
promonocyte | 1.34e-24 | 59 |
nongranular leukocyte | 7.92e-24 | 115 |
leukocyte | 3.08e-22 | 136 |
myeloid lineage restricted progenitor cell | 8.06e-22 | 66 |
hematopoietic oligopotent progenitor cell | 1.18e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.18e-20 | 161 |
myeloid leukocyte | 7.35e-20 | 72 |
hematopoietic stem cell | 1.11e-19 | 168 |
hematopoietic cell | 1.53e-18 | 177 |
myeloid cell | 3.52e-17 | 108 |
common myeloid progenitor | 3.52e-17 | 108 |
mesenchymal cell | 8.38e-08 | 354 |
connective tissue cell | 1.36e-07 | 361 |
motile cell | 7.62e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.80e-25 | 76 |
bone element | 2.77e-23 | 82 |
skeletal element | 4.95e-21 | 90 |
immune system | 2.76e-20 | 93 |
hematopoietic system | 3.84e-19 | 98 |
blood island | 3.84e-19 | 98 |
skeletal system | 1.02e-18 | 100 |
hemolymphoid system | 3.61e-17 | 108 |
musculoskeletal system | 2.75e-10 | 167 |
lateral plate mesoderm | 4.91e-08 | 203 |
connective tissue | 2.65e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 5.05e-11 | 1 |
myeloma | 5.05e-11 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.