FFCP PHASE1:Hg19::chr12:20975516..20975562,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:20975516..20975562,+|id=chr12:20975516..20975562,+|ontology_enrichment_celltype=CL:0000066!4.36e-22!254;CL:0002150!7.17e-08!3;CL:0000861!7.17e-08!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,3.48e-21,253|ontology_enrichment_development_v019=UBERON:0008947;4.97e-19;29!UBERON:0006595;2.76e-08;86|ontology_enrichment_disease=DOID:305!1.20e-61!106;DOID:0050687!1.78e-49!143;DOID:162!1.02e-33!235;DOID:14566!1.13e-32!239;DOID:1749!8.28e-18!14;DOID:299!8.67e-15!25;DOID:170!4.66e-07!6;DOID:3493!5.77e-07!2|ontology_enrichment_disease_v019=DOID:1749;6.36e-25;14!DOID:305;1.31e-12;106!DOID:3493;1.01e-10;2!DOID:299;2.16e-10;25!DOID:4074;8.77e-10;2!DOID:4905;8.77e-10;2!DOID:3498;8.77e-10;2!DOID:0050687;9.42e-08;143!DOID:170;4.94e-07;6|ontology_enrichment_disease_v019_2=DOID:305,6.95e-59,106;DOID:0050687,4.62e-44,143;DOID:162,5.59e-28,235;DOID:14566,3.21e-27,239;DOID:1749,7.15e-25,14;DOID:3493,1.01e-10,2;DOID:299,1.95e-10,25;DOID:4074,6.88e-10,2;DOID:4905,6.88e-10,2;DOID:3498,6.88e-10,2;DOID:7,1.09e-07,39;DOID:170,4.26e-07,6|ontology_enrichment_uberon=UBERON:0001737!4.08e-22!9;UBERON:0001007!1.57e-14!155;UBERON:0001555!1.57e-14!155;UBERON:0007026!1.57e-14!155;UBERON:0004119!1.78e-13!169;UBERON:0000925!1.78e-13!169;UBERON:0006595!1.78e-13!169;UBERON:0002294!5.40e-13!7;UBERON:0001173!5.40e-13!7;UBERON:0004912!5.40e-13!7;UBERON:0008947!9.46e-12!38;UBERON:0003258!9.46e-12!38;UBERON:0000077!1.67e-11!130;UBERON:0004921!1.20e-10!129;UBERON:0004185!1.20e-10!129;UBERON:0001041!8.51e-10!98;UBERON:0001557!1.75e-09!19;UBERON:0000072!6.81e-08!46;UBERON:0002110!1.08e-07!3;UBERON:0006242!1.08e-07!3;UBERON:0000344!1.83e-07!12;UBERON:0000065!2.10e-07!53;UBERON:0001004!2.74e-07!72;UBERON:0002394!4.59e-07!4;UBERON:0003928!4.59e-07!4;UBERON:0003343!4.68e-07!4;UBERON:0004785!4.68e-07!4|ontology_enrichment_uberon_v019=UBERON:0001737;4.78e-29;9!UBERON:0001557;4.78e-29;9!UBERON:0000072;1.04e-11;37!UBERON:0002394;3.67e-11;4!UBERON:0003928;3.67e-11;4!UBERON:0003343;4.21e-11;4!UBERON:0004785;4.21e-11;4!UBERON:0002294;1.24e-10;7!UBERON:0001173;1.24e-10;7!UBERON:0000065;1.44e-09;44!UBERON:0000058;1.04e-07;10!UBERON:0000974;1.56e-07;6!UBERON:0001004;3.68e-07;65|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.99e-29,9;UBERON:0008947,5.59e-14,38;UBERON:0003258,5.59e-14,38;UBERON:0001557,4.14e-13,19;UBERON:0001007,8.47e-12,145;UBERON:0001555,8.47e-12,145;UBERON:0007026,8.47e-12,145;UBERON:0004119,2.61e-11,160;UBERON:0000925,2.61e-11,160;UBERON:0006595,2.61e-11,160;UBERON:0003343,3.87e-11,4;UBERON:0004785,3.87e-11,4;UBERON:0000072,7.86e-11,47;UBERON:0004921,3.86e-10,118;UBERON:0001004,5.05e-10,74;UBERON:0001041,2.15e-09,87;UBERON:0000065,4.09e-09,54;UBERON:0002294,3.40e-08,9;UBERON:0001173,3.40e-08,9;UBERON:0004912,3.40e-08,9;UBERON:0002394,1.44e-07,6;UBERON:0003928,1.44e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77460200059766,1.18009283054671,1.44606617930089,2.09558548191549,1.74303555273925,2.13543557199987,1.21348177344148,0.98110732562673,1.92373578473195,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.80135675265481,0,0,0,25.0039809189644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.08815160325942,4.83357171624145,0,0,0,0,0,0,0,0,0,0,12.744866207976,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.843992258112108,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76098157038881,4.85560759068186,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,2.35181753794506,1.13176968554523,0,9.63121781841053,0.774050650312681,0.584714536689484,0.492692742319255,0,0,0,0.548167698587004,0,0,0.391102765469606,1.04206466326994,0.213452994739353,0.39961921916426,0,0.114536596165916,0,0.14405479798815,1.73953549791606,0,1.35904206073614,1.77824838730966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:20975516..20975562,+ | |||
|id=chr12:20975516..20975562,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.36e-22!254;CL:0002150!7.17e-08!3;CL:0000861!7.17e-08!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.48e-21,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.97e-19;29!UBERON:0006595;2.76e-08;86 | |||
|ontology_enrichment_disease=DOID:305!1.20e-61!106;DOID:0050687!1.78e-49!143;DOID:162!1.02e-33!235;DOID:14566!1.13e-32!239;DOID:1749!8.28e-18!14;DOID:299!8.67e-15!25;DOID:170!4.66e-07!6;DOID:3493!5.77e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.36e-25;14!DOID:305;1.31e-12;106!DOID:3493;1.01e-10;2!DOID:299;2.16e-10;25!DOID:4074;8.77e-10;2!DOID:4905;8.77e-10;2!DOID:3498;8.77e-10;2!DOID:0050687;9.42e-08;143!DOID:170;4.94e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.95e-59,106;DOID:0050687,4.62e-44,143;DOID:162,5.59e-28,235;DOID:14566,3.21e-27,239;DOID:1749,7.15e-25,14;DOID:3493,1.01e-10,2;DOID:299,1.95e-10,25;DOID:4074,6.88e-10,2;DOID:4905,6.88e-10,2;DOID:3498,6.88e-10,2;DOID:7,1.09e-07,39;DOID:170,4.26e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.08e-22!9;UBERON:0001007!1.57e-14!155;UBERON:0001555!1.57e-14!155;UBERON:0007026!1.57e-14!155;UBERON:0004119!1.78e-13!169;UBERON:0000925!1.78e-13!169;UBERON:0006595!1.78e-13!169;UBERON:0002294!5.40e-13!7;UBERON:0001173!5.40e-13!7;UBERON:0004912!5.40e-13!7;UBERON:0008947!9.46e-12!38;UBERON:0003258!9.46e-12!38;UBERON:0000077!1.67e-11!130;UBERON:0004921!1.20e-10!129;UBERON:0004185!1.20e-10!129;UBERON:0001041!8.51e-10!98;UBERON:0001557!1.75e-09!19;UBERON:0000072!6.81e-08!46;UBERON:0002110!1.08e-07!3;UBERON:0006242!1.08e-07!3;UBERON:0000344!1.83e-07!12;UBERON:0000065!2.10e-07!53;UBERON:0001004!2.74e-07!72;UBERON:0002394!4.59e-07!4;UBERON:0003928!4.59e-07!4;UBERON:0003343!4.68e-07!4;UBERON:0004785!4.68e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.78e-29;9!UBERON:0001557;4.78e-29;9!UBERON:0000072;1.04e-11;37!UBERON:0002394;3.67e-11;4!UBERON:0003928;3.67e-11;4!UBERON:0003343;4.21e-11;4!UBERON:0004785;4.21e-11;4!UBERON:0002294;1.24e-10;7!UBERON:0001173;1.24e-10;7!UBERON:0000065;1.44e-09;44!UBERON:0000058;1.04e-07;10!UBERON:0000974;1.56e-07;6!UBERON:0001004;3.68e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.99e-29,9;UBERON:0008947,5.59e-14,38;UBERON:0003258,5.59e-14,38;UBERON:0001557,4.14e-13,19;UBERON:0001007,8.47e-12,145;UBERON:0001555,8.47e-12,145;UBERON:0007026,8.47e-12,145;UBERON:0004119,2.61e-11,160;UBERON:0000925,2.61e-11,160;UBERON:0006595,2.61e-11,160;UBERON:0003343,3.87e-11,4;UBERON:0004785,3.87e-11,4;UBERON:0000072,7.86e-11,47;UBERON:0004921,3.86e-10,118;UBERON:0001004,5.05e-10,74;UBERON:0001041,2.15e-09,87;UBERON:0000065,4.09e-09,54;UBERON:0002294,3.40e-08,9;UBERON:0001173,3.40e-08,9;UBERON:0004912,3.40e-08,9;UBERON:0002394,1.44e-07,6;UBERON:0003928,1.44e-07,6 | |||
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|short_description=p@chr12:20975516..20975562,+ | |||
}} |
Revision as of 22:07, 10 September 2013
Short description: | p@chr12:20975516..20975562, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:20975516..20975562, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.48e-21 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.99e-29 | 9 |
respiratory primordium | 5.59e-14 | 38 |
endoderm of foregut | 5.59e-14 | 38 |
upper respiratory tract | 4.14e-13 | 19 |
digestive system | 8.47e-12 | 145 |
digestive tract | 8.47e-12 | 145 |
primitive gut | 8.47e-12 | 145 |
endoderm-derived structure | 2.61e-11 | 160 |
endoderm | 2.61e-11 | 160 |
presumptive endoderm | 2.61e-11 | 160 |
mucosa of oral region | 3.87e-11 | 4 |
respiratory system mucosa | 3.87e-11 | 4 |
segment of respiratory tract | 7.86e-11 | 47 |
subdivision of digestive tract | 3.86e-10 | 118 |
respiratory system | 5.05e-10 | 74 |
foregut | 2.15e-09 | 87 |
respiratory tract | 4.09e-09 | 54 |
biliary system | 3.40e-08 | 9 |
biliary tree | 3.40e-08 | 9 |
biliary bud | 3.40e-08 | 9 |
bile duct | 1.44e-07 | 6 |
digestive system duct | 1.44e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.95e-59 | 106 |
cell type cancer | 4.62e-44 | 143 |
cancer | 5.59e-28 | 235 |
disease of cellular proliferation | 3.21e-27 | 239 |
squamous cell carcinoma | 7.15e-25 | 14 |
signet ring cell adenocarcinoma | 1.01e-10 | 2 |
adenocarcinoma | 1.95e-10 | 25 |
pancreas adenocarcinoma | 6.88e-10 | 2 |
pancreatic carcinoma | 6.88e-10 | 2 |
pancreatic ductal adenocarcinoma | 6.88e-10 | 2 |
disease of anatomical entity | 1.09e-07 | 39 |
endocrine gland cancer | 4.26e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.