FFCP PHASE1:Hg19::chr12:53097305..53097310,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=374454|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20411|TSSclassifier=N|UniProt=Q7Z794,F5GY66,F8VS61,Q0IIN1|association_with_transcript=-58bp_to_ENST00000341809,ENST00000537195,ENST00000553168,NM_175078,uc001saw.2,uc009zmi.2_5end|coexpression_cluster_id=C208|description=CAGE_peak_1_at_KRT77_5end|id=chr12:53097305..53097310,-|ontology_enrichment_celltype=CL:0000244!1.29e-24!4;CL:0000731!1.29e-24!4;CL:0002274!9.56e-20!5;CL:0000457!9.56e-20!5;CL:0002191!9.56e-20!5;CL:0000097!9.56e-20!5;CL:0000831!9.56e-20!5;CL:0002028!9.56e-20!5;CL:0002623!6.10e-15!3;CL:0000163!3.09e-11!9;CL:0000622!2.47e-09!5;CL:0000154!6.38e-08!6;CL:0000151!1.87e-07!35;CL:0001014!9.44e-07!2;CL:0001016!9.44e-07!2|ontology_enrichment_celltype_v019=CL:0000244;1.43e-25;4!CL:0000731;1.43e-25;4!CL:0000097;1.10e-20;5!CL:0001014;7.30e-14;2!CL:0001016;7.30e-14;2!CL:0000163;5.83e-12;9!CL:0002623;1.47e-09;3!CL:0000151;2.62e-07;36|ontology_enrichment_celltype_v019_2=CL:0000244,1.26e-25,4;CL:0000731,1.26e-25,4;CL:0000097,1.21e-20,5;CL:0002028,1.21e-20,5;CL:0001014,7.30e-14,2;CL:0001016,7.30e-14,2;CL:0000163,6.16e-12,9;CL:0002623,1.54e-09,3;CL:0000151,7.99e-07,36|ontology_enrichment_development_v019=UBERON:0004874;6.72e-26;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000365!7.89e-20!5;UBERON:0003408!7.99e-17!10;UBERON:0005910!1.25e-16!6;UBERON:0007029!2.63e-12!1;UBERON:0000989!4.06e-12!1;UBERON:0008811!4.06e-12!1;UBERON:0006258!4.06e-12!1;UBERON:0005876!4.06e-12!1;UBERON:0004874!4.06e-12!1;UBERON:0000997!1.47e-11!1;UBERON:0005056!1.47e-11!1;UBERON:0002370!3.24e-11!4;UBERON:0005058!3.24e-11!4;UBERON:0009113!3.24e-11!4;UBERON:0003295!3.24e-11!4;UBERON:0005562!3.24e-11!4;UBERON:0000974!7.87e-10!10;UBERON:0001044!6.38e-08!6;UBERON:0003293!6.38e-08!6;UBERON:0003294!6.38e-08!6;UBERON:0010047!6.38e-08!6;UBERON:0000167!6.38e-08!6;UBERON:0003351!9.01e-08!6;UBERON:0004177!8.84e-07!7|ontology_enrichment_uberon_v019=UBERON:0007029;2.16e-26;1!UBERON:0000989;6.72e-26;1!UBERON:0008811;6.72e-26;1!UBERON:0000365;1.10e-20;5!UBERON:0005910;2.01e-17;6!UBERON:0000486;3.27e-09;12!UBERON:0000014;1.31e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.16e-26,1;UBERON:0000989,5.93e-26,1;UBERON:0008811,5.93e-26,1;UBERON:0006258,5.93e-26,1;UBERON:0005876,5.93e-26,1;UBERON:0004874,5.93e-26,1;UBERON:0000365,9.93e-21,5;UBERON:0005910,1.85e-17,6;UBERON:0000014,1.31e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03664057770386,3.31475892859011,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36942951335251,1.33029046061003,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.96421759102155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,2.07377898544228,0,0,0,0,0,0,0,0,0,0,0,0,0,67.9995390282795,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.322944549180031,0.124149428591716,0,0,0,0,0,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0,0|short_description=p1@KRT77}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=374454 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20411 | |||
|TSSclassifier=N | |||
|UniProt=Q7Z794,F5GY66,F8VS61,Q0IIN1 | |||
|association_with_transcript=-58bp_to_ENST00000341809,ENST00000537195,ENST00000553168,NM_175078,uc001saw.2,uc009zmi.2_5end | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_1_at_KRT77_5end | |||
|id=chr12:53097305..53097310,- | |||
|ontology_enrichment_celltype=CL:0000244!1.29e-24!4;CL:0000731!1.29e-24!4;CL:0002274!9.56e-20!5;CL:0000457!9.56e-20!5;CL:0002191!9.56e-20!5;CL:0000097!9.56e-20!5;CL:0000831!9.56e-20!5;CL:0002028!9.56e-20!5;CL:0002623!6.10e-15!3;CL:0000163!3.09e-11!9;CL:0000622!2.47e-09!5;CL:0000154!6.38e-08!6;CL:0000151!1.87e-07!35;CL:0001014!9.44e-07!2;CL:0001016!9.44e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.43e-25;4!CL:0000731;1.43e-25;4!CL:0000097;1.10e-20;5!CL:0001014;7.30e-14;2!CL:0001016;7.30e-14;2!CL:0000163;5.83e-12;9!CL:0002623;1.47e-09;3!CL:0000151;2.62e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.26e-25,4;CL:0000731,1.26e-25,4;CL:0000097,1.21e-20,5;CL:0002028,1.21e-20,5;CL:0001014,7.30e-14,2;CL:0001016,7.30e-14,2;CL:0000163,6.16e-12,9;CL:0002623,1.54e-09,3;CL:0000151,7.99e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0004874;6.72e-26;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!7.89e-20!5;UBERON:0003408!7.99e-17!10;UBERON:0005910!1.25e-16!6;UBERON:0007029!2.63e-12!1;UBERON:0000989!4.06e-12!1;UBERON:0008811!4.06e-12!1;UBERON:0006258!4.06e-12!1;UBERON:0005876!4.06e-12!1;UBERON:0004874!4.06e-12!1;UBERON:0000997!1.47e-11!1;UBERON:0005056!1.47e-11!1;UBERON:0002370!3.24e-11!4;UBERON:0005058!3.24e-11!4;UBERON:0009113!3.24e-11!4;UBERON:0003295!3.24e-11!4;UBERON:0005562!3.24e-11!4;UBERON:0000974!7.87e-10!10;UBERON:0001044!6.38e-08!6;UBERON:0003293!6.38e-08!6;UBERON:0003294!6.38e-08!6;UBERON:0010047!6.38e-08!6;UBERON:0000167!6.38e-08!6;UBERON:0003351!9.01e-08!6;UBERON:0004177!8.84e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;2.16e-26;1!UBERON:0000989;6.72e-26;1!UBERON:0008811;6.72e-26;1!UBERON:0000365;1.10e-20;5!UBERON:0005910;2.01e-17;6!UBERON:0000486;3.27e-09;12!UBERON:0000014;1.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.16e-26,1;UBERON:0000989,5.93e-26,1;UBERON:0008811,5.93e-26,1;UBERON:0006258,5.93e-26,1;UBERON:0005876,5.93e-26,1;UBERON:0004874,5.93e-26,1;UBERON:0000365,9.93e-21,5;UBERON:0005910,1.85e-17,6;UBERON:0000014,1.31e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03664057770386,3.31475892859011,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36942951335251,1.33029046061003,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.96421759102155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,2.07377898544228,0,0,0,0,0,0,0,0,0,0,0,0,0,67.9995390282795,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.322944549180031,0.124149428591716,0,0,0,0,0,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@KRT77 | |||
}} |
Revision as of 23:12, 10 September 2013
Short description: | p1@KRT77 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_KRT77_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | -58bp_to_ENST00000341809, ENST00000537195, ENST00000553168, NM_175078, uc001saw.2, uc009zmi.2_5end |
EntrezGene: | KRT77 |
HGNC: | 20411 |
UniProt: | Q7Z794F5GY66F8VS61Q0IIN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.26e-25 | 4 |
urothelial cell | 1.26e-25 | 4 |
mast cell | 1.21e-20 | 5 |
basophil mast progenitor cell | 1.21e-20 | 5 |
CD1a-positive Langerhans cell | 7.30e-14 | 2 |
immature CD1a-positive Langerhans cell | 7.30e-14 | 2 |
endocrine cell | 6.16e-12 | 9 |
acinar cell of salivary gland | 1.54e-09 | 3 |
secretory cell | 7.99e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
surface | 2.16e-26 | 1 |
penis | 5.93e-26 | 1 |
intromittent organ | 5.93e-26 | 1 |
lateral plate mesenchyme | 5.93e-26 | 1 |
undifferentiated genital tubercle | 5.93e-26 | 1 |
somatopleure | 5.93e-26 | 1 |
urothelium | 9.93e-21 | 5 |
transitional epithelium | 1.85e-17 | 6 |
zone of skin | 1.31e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.