FFCP PHASE1:Hg19::chr12:53243246..53243253,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=196374|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28926|TSSclassifier=W|UniProt=F8VS93|association_with_transcript=-370bp_to_ENST00000547110_5end|coexpression_cluster_id=C1674|description=CAGE_peak_3_at_KRT78_5end|id=chr12:53243246..53243253,-|ontology_enrichment_celltype=CL:0000622!1.47e-10!5;CL:0000154!6.02e-09!6;CL:0000317!2.91e-07!2;CL:1000448!2.91e-07!2;CL:0002308!2.91e-07!2;CL:0002140!2.91e-07!2;CL:0001014!3.28e-07!2;CL:0001016!3.28e-07!2;CL:0000362!9.11e-07!8|ontology_enrichment_celltype_v019=CL:0002623;3.27e-23;3!CL:0000622;1.60e-14;5!CL:0000154;2.45e-12;6!CL:0000150;1.12e-08;9|ontology_enrichment_celltype_v019_2=CL:0002623,3.27e-23,3;CL:0000622,1.60e-14,5;CL:0000154,2.45e-12,6;CL:0000150,1.12e-08,9|ontology_enrichment_development_v019=UBERON:0008814;5.04e-34;2!UBERON:0010056;5.04e-34;2|ontology_enrichment_disease=DOID:3151!4.77e-13!1;DOID:3149!4.77e-13!1;DOID:3451!3.70e-07!2;DOID:4159!3.70e-07!2;DOID:0060122!3.70e-07!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001042!3.10e-19!10;UBERON:0009145!3.10e-19!10;UBERON:0006562!1.63e-17!11;UBERON:0001723!4.17e-17!3;UBERON:0001033!4.17e-17!3;UBERON:0010056!4.17e-17!3;UBERON:0007029!2.32e-13!1;UBERON:0002372!2.62e-13!1;UBERON:0001961!2.62e-13!1;UBERON:0001744!2.62e-13!1;UBERON:0001735!2.62e-13!1;UBERON:0000014!8.17e-13!4;UBERON:0000078!5.66e-11!18;UBERON:0001557!3.00e-10!19;UBERON:0000166!1.96e-09!21;UBERON:0001003!3.68e-08!14;UBERON:0007376!3.68e-08!14;UBERON:0007383!3.68e-08!14;UBERON:0008814!1.12e-07!15;UBERON:0002419!2.91e-07!2;UBERON:0007771!2.91e-07!2;UBERON:0003297!2.91e-07!2;UBERON:0001821!2.91e-07!2;UBERON:0003487!2.91e-07!2;UBERON:0001820!2.91e-07!2;UBERON:0005089!2.91e-07!2;UBERON:0005088!2.91e-07!2;UBERON:0000341!3.48e-07!2;UBERON:0003102!3.80e-07!95;UBERON:0000165!4.07e-07!28;UBERON:0000930!4.07e-07!28;UBERON:0003127!5.28e-07!2|ontology_enrichment_uberon_v019=UBERON:0001723;9.74e-88;3!UBERON:0001033;9.74e-88;3!UBERON:0000165;3.56e-22;28!UBERON:0000020;1.33e-12;23!UBERON:0001044;2.45e-12;6!UBERON:0003293;2.45e-12;6!UBERON:0003294;2.45e-12;6!UBERON:0010047;2.45e-12;6!UBERON:0003408;2.45e-12;6!UBERON:0000167;2.45e-12;6!UBERON:0001032;3.97e-12;24!UBERON:0004456;3.97e-12;24!UBERON:0007811;2.51e-07;52!UBERON:0000033;4.15e-07;50|ontology_enrichment_uberon_v019_2=UBERON:0001723,9.74e-88,3;UBERON:0001033,9.74e-88,3;UBERON:0010056,9.74e-88,3;UBERON:0000166,7.08e-28,22;UBERON:0001042,2.38e-27,10;UBERON:0009145,2.38e-27,10;UBERON:0006562,5.49e-25,11;UBERON:0000165,1.88e-21,29;UBERON:0000930,1.88e-21,29;UBERON:0000161,1.62e-17,36;UBERON:0008814,9.05e-16,18;UBERON:0001557,5.27e-15,19;UBERON:0001444,3.57e-13,49;UBERON:0001044,2.45e-12,6;UBERON:0003293,2.45e-12,6;UBERON:0003294,2.45e-12,6;UBERON:0010047,2.45e-12,6;UBERON:0000167,2.45e-12,6;UBERON:0000020,3.97e-12,24;UBERON:0001032,3.97e-12,24;UBERON:0004456,3.97e-12,24;UBERON:0000033,1.15e-11,56;UBERON:0000153,1.22e-10,62;UBERON:0007811,1.22e-10,62;UBERON:0001004,4.40e-09,74;UBERON:0003408,6.13e-08,10;UBERON:0001041,7.10e-08,87;UBERON:0003102,4.88e-07,99;UBERON:0000072,1.00e-06,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07377898544228,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97142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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=196374 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28926 | |||
|TSSclassifier=W | |||
|UniProt=F8VS93 | |||
|association_with_transcript=-370bp_to_ENST00000547110_5end | |||
|coexpression_cluster_id=C1674 | |||
|description=CAGE_peak_3_at_KRT78_5end | |||
|id=chr12:53243246..53243253,- | |||
|ontology_enrichment_celltype=CL:0000622!1.47e-10!5;CL:0000154!6.02e-09!6;CL:0000317!2.91e-07!2;CL:1000448!2.91e-07!2;CL:0002308!2.91e-07!2;CL:0002140!2.91e-07!2;CL:0001014!3.28e-07!2;CL:0001016!3.28e-07!2;CL:0000362!9.11e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002623;3.27e-23;3!CL:0000622;1.60e-14;5!CL:0000154;2.45e-12;6!CL:0000150;1.12e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,3.27e-23,3;CL:0000622,1.60e-14,5;CL:0000154,2.45e-12,6;CL:0000150,1.12e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0008814;5.04e-34;2!UBERON:0010056;5.04e-34;2 | |||
|ontology_enrichment_disease=DOID:3151!4.77e-13!1;DOID:3149!4.77e-13!1;DOID:3451!3.70e-07!2;DOID:4159!3.70e-07!2;DOID:0060122!3.70e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001042!3.10e-19!10;UBERON:0009145!3.10e-19!10;UBERON:0006562!1.63e-17!11;UBERON:0001723!4.17e-17!3;UBERON:0001033!4.17e-17!3;UBERON:0010056!4.17e-17!3;UBERON:0007029!2.32e-13!1;UBERON:0002372!2.62e-13!1;UBERON:0001961!2.62e-13!1;UBERON:0001744!2.62e-13!1;UBERON:0001735!2.62e-13!1;UBERON:0000014!8.17e-13!4;UBERON:0000078!5.66e-11!18;UBERON:0001557!3.00e-10!19;UBERON:0000166!1.96e-09!21;UBERON:0001003!3.68e-08!14;UBERON:0007376!3.68e-08!14;UBERON:0007383!3.68e-08!14;UBERON:0008814!1.12e-07!15;UBERON:0002419!2.91e-07!2;UBERON:0007771!2.91e-07!2;UBERON:0003297!2.91e-07!2;UBERON:0001821!2.91e-07!2;UBERON:0003487!2.91e-07!2;UBERON:0001820!2.91e-07!2;UBERON:0005089!2.91e-07!2;UBERON:0005088!2.91e-07!2;UBERON:0000341!3.48e-07!2;UBERON:0003102!3.80e-07!95;UBERON:0000165!4.07e-07!28;UBERON:0000930!4.07e-07!28;UBERON:0003127!5.28e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;9.74e-88;3!UBERON:0001033;9.74e-88;3!UBERON:0000165;3.56e-22;28!UBERON:0000020;1.33e-12;23!UBERON:0001044;2.45e-12;6!UBERON:0003293;2.45e-12;6!UBERON:0003294;2.45e-12;6!UBERON:0010047;2.45e-12;6!UBERON:0003408;2.45e-12;6!UBERON:0000167;2.45e-12;6!UBERON:0001032;3.97e-12;24!UBERON:0004456;3.97e-12;24!UBERON:0007811;2.51e-07;52!UBERON:0000033;4.15e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,9.74e-88,3;UBERON:0001033,9.74e-88,3;UBERON:0010056,9.74e-88,3;UBERON:0000166,7.08e-28,22;UBERON:0001042,2.38e-27,10;UBERON:0009145,2.38e-27,10;UBERON:0006562,5.49e-25,11;UBERON:0000165,1.88e-21,29;UBERON:0000930,1.88e-21,29;UBERON:0000161,1.62e-17,36;UBERON:0008814,9.05e-16,18;UBERON:0001557,5.27e-15,19;UBERON:0001444,3.57e-13,49;UBERON:0001044,2.45e-12,6;UBERON:0003293,2.45e-12,6;UBERON:0003294,2.45e-12,6;UBERON:0010047,2.45e-12,6;UBERON:0000167,2.45e-12,6;UBERON:0000020,3.97e-12,24;UBERON:0001032,3.97e-12,24;UBERON:0004456,3.97e-12,24;UBERON:0000033,1.15e-11,56;UBERON:0000153,1.22e-10,62;UBERON:0007811,1.22e-10,62;UBERON:0001004,4.40e-09,74;UBERON:0003408,6.13e-08,10;UBERON:0001041,7.10e-08,87;UBERON:0003102,4.88e-07,99;UBERON:0000072,1.00e-06,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07377898544228,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0.0620747142958579,0,0,0,2.17716747896961,2.05339980651169,0.80822463617505,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@KRT78 | |||
}} |
Revision as of 23:14, 10 September 2013
Short description: | p3@KRT78 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_KRT78_5end |
Coexpression cluster: | C1674_tongue_salivary_pagetoid_uterus_cervix_esophagus_skin |
Association with transcript: | -370bp_to_ENST00000547110_5end |
EntrezGene: | KRT78 |
HGNC: | 28926 |
UniProt: | F8VS93 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 3.27e-23 | 3 |
acinar cell | 1.60e-14 | 5 |
protein secreting cell | 2.45e-12 | 6 |
glandular epithelial cell | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
tongue | 9.74e-88 | 3 |
gustatory system | 9.74e-88 | 3 |
future tongue | 9.74e-88 | 3 |
oral opening | 7.08e-28 | 22 |
chordate pharynx | 2.38e-27 | 10 |
pharyngeal region of foregut | 2.38e-27 | 10 |
pharynx | 5.49e-25 | 11 |
mouth | 1.88e-21 | 29 |
stomodeum | 1.88e-21 | 29 |
orifice | 1.62e-17 | 36 |
pharyngeal arch system | 9.05e-16 | 18 |
upper respiratory tract | 5.27e-15 | 19 |
subdivision of head | 3.57e-13 | 49 |
saliva-secreting gland | 2.45e-12 | 6 |
gland of oral region | 2.45e-12 | 6 |
gland of foregut | 2.45e-12 | 6 |
oral gland | 2.45e-12 | 6 |
oral cavity | 2.45e-12 | 6 |
sense organ | 3.97e-12 | 24 |
sensory system | 3.97e-12 | 24 |
entire sense organ system | 3.97e-12 | 24 |
head | 1.15e-11 | 56 |
anterior region of body | 1.22e-10 | 62 |
craniocervical region | 1.22e-10 | 62 |
respiratory system | 4.40e-09 | 74 |
gland of gut | 6.13e-08 | 10 |
foregut | 7.10e-08 | 87 |
surface structure | 4.88e-07 | 99 |
segment of respiratory tract | 1.00e-06 | 47 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.