FFCP PHASE1:Hg19::chr12:74686409..74686425,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100507377|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_ENST00000549905,NR_038300,uc001sxc.2,uc009zrx.1_5end|description=CAGE_peak_1_at_LOC100507377_5end|id=chr12:74686409..74686425,-|ontology_enrichment_celltype=CL:0002322!1.73e-09!5;CL:0000054!1.13e-07!2;CL:0000137!1.13e-07!2;CL:0000092!1.13e-07!2;CL:0000039!1.18e-07!7;CL:0000586!1.18e-07!7|ontology_enrichment_celltype_v019=CL:0000054;1.44e-12;2!CL:0000137;1.44e-12;2!CL:0000092;1.44e-12;2!CL:0000039;3.47e-08;7!CL:0000586;3.47e-08;7!CL:0002379;6.12e-07;1|ontology_enrichment_celltype_v019_2=CL:0000054,1.44e-12,2;CL:0000137,1.44e-12,2;CL:0000092,1.44e-12,2;CL:0000039,3.47e-08,7;CL:0000586,3.47e-08,7;CL:0002379,6.12e-07,1|ontology_enrichment_development_v019=UBERON:0009117;4.23e-20;10!UBERON:0005564;4.23e-20;10!UBERON:0003124;8.92e-07;1|ontology_enrichment_disease=DOID:1036!1.10e-10!8;DOID:201!5.03e-09!6;DOID:0060100!5.03e-09!6;DOID:200!1.13e-07!2;DOID:4305!1.13e-07!2;DOID:4231!1.51e-07!2;DOID:1907!1.51e-07!2;DOID:162!2.79e-07!235;DOID:14566!5.71e-07!239;DOID:2531!8.74e-07!51;DOID:0060083!8.74e-07!51|ontology_enrichment_disease_v019=DOID:1036;1.07e-18;8!DOID:201;1.72e-15;6!DOID:0060100;1.72e-15;6!DOID:200;1.44e-12;2!DOID:4305;1.44e-12;2!DOID:4231;2.49e-12;2!DOID:1907;2.49e-12;2!DOID:8692;3.46e-11;31!DOID:2531;2.18e-10;51!DOID:0060083;2.18e-10;51!DOID:1240;6.45e-10;39!DOID:9119;1.46e-07;1!DOID:0060085;3.01e-07;1!DOID:3165;3.01e-07;1!DOID:0060121;3.01e-07;1!DOID:2438;3.01e-07;1!DOID:4418;3.01e-07;1!DOID:4960;4.99e-07;1!DOID:0070004;4.99e-07;1!DOID:3620;6.12e-07;1!DOID:3565;6.12e-07;1!DOID:5662;8.92e-07;1|ontology_enrichment_disease_v019_2=DOID:1036,1.05e-18,8;DOID:201,1.69e-15,6;DOID:0060100,1.69e-15,6;DOID:2531,4.43e-14,51;DOID:0060083,4.43e-14,51;DOID:162,1.14e-13,235;DOID:14566,2.88e-13,239;DOID:200,1.44e-12,2;DOID:4305,1.44e-12,2;DOID:0050686,1.71e-12,137;DOID:4231,2.42e-12,2;DOID:1907,2.42e-12,2;DOID:8692,5.02e-11,31;DOID:1240,1.09e-10,39;DOID:9119,1.46e-07,1;DOID:0060085,3.01e-07,1;DOID:3165,3.01e-07,1;DOID:0060121,3.01e-07,1;DOID:2438,3.01e-07,1;DOID:4418,3.01e-07,1;DOID:4960,5.14e-07,1;DOID:0070004,5.14e-07,1;DOID:3620,6.12e-07,1;DOID:3565,6.12e-07,1;DOID:5662,9.18e-07,1|ontology_enrichment_uberon=UBERON:0000473!3.68e-14!8;UBERON:0003135!4.30e-10!11|ontology_enrichment_uberon_v019=UBERON:0000473;6.44e-18;8!UBERON:0003135;5.58e-13;11!UBERON:0000991;2.73e-09;21!UBERON:0002371;7.17e-08;12!UBERON:0001282;2.52e-07;1!UBERON:0009842;2.52e-07;1!UBERON:0003704;2.52e-07;1!UBERON:0001171;2.52e-07;1!UBERON:0001172;2.52e-07;1!UBERON:0007195;3.60e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.11e-18,8;UBERON:0003135,5.37e-13,11;UBERON:0000991,2.77e-09,21;UBERON:0009196,2.77e-09,21;UBERON:0009117,2.77e-09,21;UBERON:0005564,2.77e-09,21;UBERON:0004176,7.76e-09,22;UBERON:0001282,2.52e-07,1;UBERON:0009842,2.52e-07,1;UBERON:0003704,2.52e-07,1;UBERON:0001171,2.52e-07,1;UBERON:0001172,2.52e-07,1;UBERON:0007195,3.60e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545812300115692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37402137902306,0,0,0,0,9.187403738543,0,0,69.2789693435466,0,0,0,0,1.67165076416218,0,0,0,0,0,0,0,0,0,0,0,0,1.94310496754094,0,0,0,0,0,0,0,28.8956174376056,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,37.9427045970514,0,0,0,0.31900115973192,0,0,0,29.8262487150547,0,43.9911538203502,43.3298200842204,39.2702513523472,40.986806268424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.1917670958843,0,0,0,0,31.1702990948123,0,0,0,0,0,0,0,0,0,27.1613554507428,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,57.0830152684524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.44953280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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=100507377 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000549905,NR_038300,uc001sxc.2,uc009zrx.1_5end | |||
|description=CAGE_peak_1_at_LOC100507377_5end | |||
|id=chr12:74686409..74686425,- | |||
|ontology_enrichment_celltype=CL:0002322!1.73e-09!5;CL:0000054!1.13e-07!2;CL:0000137!1.13e-07!2;CL:0000092!1.13e-07!2;CL:0000039!1.18e-07!7;CL:0000586!1.18e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000054;1.44e-12;2!CL:0000137;1.44e-12;2!CL:0000092;1.44e-12;2!CL:0000039;3.47e-08;7!CL:0000586;3.47e-08;7!CL:0002379;6.12e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,1.44e-12,2;CL:0000137,1.44e-12,2;CL:0000092,1.44e-12,2;CL:0000039,3.47e-08,7;CL:0000586,3.47e-08,7;CL:0002379,6.12e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.23e-20;10!UBERON:0005564;4.23e-20;10!UBERON:0003124;8.92e-07;1 | |||
|ontology_enrichment_disease=DOID:1036!1.10e-10!8;DOID:201!5.03e-09!6;DOID:0060100!5.03e-09!6;DOID:200!1.13e-07!2;DOID:4305!1.13e-07!2;DOID:4231!1.51e-07!2;DOID:1907!1.51e-07!2;DOID:162!2.79e-07!235;DOID:14566!5.71e-07!239;DOID:2531!8.74e-07!51;DOID:0060083!8.74e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.07e-18;8!DOID:201;1.72e-15;6!DOID:0060100;1.72e-15;6!DOID:200;1.44e-12;2!DOID:4305;1.44e-12;2!DOID:4231;2.49e-12;2!DOID:1907;2.49e-12;2!DOID:8692;3.46e-11;31!DOID:2531;2.18e-10;51!DOID:0060083;2.18e-10;51!DOID:1240;6.45e-10;39!DOID:9119;1.46e-07;1!DOID:0060085;3.01e-07;1!DOID:3165;3.01e-07;1!DOID:0060121;3.01e-07;1!DOID:2438;3.01e-07;1!DOID:4418;3.01e-07;1!DOID:4960;4.99e-07;1!DOID:0070004;4.99e-07;1!DOID:3620;6.12e-07;1!DOID:3565;6.12e-07;1!DOID:5662;8.92e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.05e-18,8;DOID:201,1.69e-15,6;DOID:0060100,1.69e-15,6;DOID:2531,4.43e-14,51;DOID:0060083,4.43e-14,51;DOID:162,1.14e-13,235;DOID:14566,2.88e-13,239;DOID:200,1.44e-12,2;DOID:4305,1.44e-12,2;DOID:0050686,1.71e-12,137;DOID:4231,2.42e-12,2;DOID:1907,2.42e-12,2;DOID:8692,5.02e-11,31;DOID:1240,1.09e-10,39;DOID:9119,1.46e-07,1;DOID:0060085,3.01e-07,1;DOID:3165,3.01e-07,1;DOID:0060121,3.01e-07,1;DOID:2438,3.01e-07,1;DOID:4418,3.01e-07,1;DOID:4960,5.14e-07,1;DOID:0070004,5.14e-07,1;DOID:3620,6.12e-07,1;DOID:3565,6.12e-07,1;DOID:5662,9.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.68e-14!8;UBERON:0003135!4.30e-10!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.44e-18;8!UBERON:0003135;5.58e-13;11!UBERON:0000991;2.73e-09;21!UBERON:0002371;7.17e-08;12!UBERON:0001282;2.52e-07;1!UBERON:0009842;2.52e-07;1!UBERON:0003704;2.52e-07;1!UBERON:0001171;2.52e-07;1!UBERON:0001172;2.52e-07;1!UBERON:0007195;3.60e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.11e-18,8;UBERON:0003135,5.37e-13,11;UBERON:0000991,2.77e-09,21;UBERON:0009196,2.77e-09,21;UBERON:0009117,2.77e-09,21;UBERON:0005564,2.77e-09,21;UBERON:0004176,7.76e-09,22;UBERON:0001282,2.52e-07,1;UBERON:0009842,2.52e-07,1;UBERON:0003704,2.52e-07,1;UBERON:0001171,2.52e-07,1;UBERON:0001172,2.52e-07,1;UBERON:0007195,3.60e-07,1 | |||
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|short_description=p1@LOC100507377 | |||
}} |
Revision as of 00:25, 11 September 2013
Short description: | p1@LOC100507377 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC100507377_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000549905, NR_038300, uc001sxc.2, uc009zrx.1_5end |
EntrezGene: | LOC100507377 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 1.44e-12 | 2 |
osteocyte | 1.44e-12 | 2 |
osteoclast | 1.44e-12 | 2 |
germ line cell | 3.47e-08 | 7 |
germ cell | 3.47e-08 | 7 |
meningothelial cell | 6.12e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 6.11e-18 | 8 |
male reproductive organ | 5.37e-13 | 11 |
gonad | 2.77e-09 | 21 |
indifferent external genitalia | 2.77e-09 | 21 |
indifferent gonad | 2.77e-09 | 21 |
gonad primordium | 2.77e-09 | 21 |
external genitalia | 7.76e-09 | 22 |
intralobular bile duct | 2.52e-07 | 1 |
acinus | 2.52e-07 | 1 |
intrahepatic bile duct | 2.52e-07 | 1 |
portal lobule | 2.52e-07 | 1 |
hepatic acinus | 2.52e-07 | 1 |
stroma of bone marrow | 3.60e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.05e-18 | 8 |
connective tissue cancer | 1.69e-15 | 6 |
musculoskeletal system cancer | 1.69e-15 | 6 |
hematologic cancer | 4.43e-14 | 51 |
immune system cancer | 4.43e-14 | 51 |
cancer | 1.14e-13 | 235 |
disease of cellular proliferation | 2.88e-13 | 239 |
giant cell tumor | 1.44e-12 | 2 |
bone giant cell tumor | 1.44e-12 | 2 |
organ system cancer | 1.71e-12 | 137 |
histiocytoma | 2.42e-12 | 2 |
malignant fibroxanthoma | 2.42e-12 | 2 |
myeloid leukemia | 5.02e-11 | 31 |
leukemia | 1.09e-10 | 39 |
acute myeloid leukemia | 1.46e-07 | 1 |
organ system benign neoplasm | 3.01e-07 | 1 |
skin benign neoplasm | 3.01e-07 | 1 |
integumentary system benign neoplasm | 3.01e-07 | 1 |
dermis tumor | 3.01e-07 | 1 |
cutaneous fibrous histiocytoma | 3.01e-07 | 1 |
bone marrow cancer | 5.14e-07 | 1 |
myeloma | 5.14e-07 | 1 |
central nervous system cancer | 6.12e-07 | 1 |
meningioma | 6.12e-07 | 1 |
pleomorphic carcinoma | 9.18e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.