FFCP PHASE1:Hg19::chr16:55539539..55539552,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C351|description=CAGE_peak_at_chr16:55539539..55539552,+|id=chr16:55539539..55539552,+|ontology_enrichment_celltype=CL:0000055!1.08e-32!180;CL:0000057!4.59e-19!75;CL:0000680!5.41e-14!57;CL:0000056!5.41e-14!57;CL:0000355!5.41e-14!57;CL:0000183!4.21e-13!59;CL:0000192!6.08e-13!42;CL:0000514!6.08e-13!42;CL:0000187!1.80e-12!54;CL:0000393!1.18e-10!60;CL:0000211!1.18e-10!60;CL:0000359!4.38e-10!32;CL:0000048!9.65e-10!430;CL:0000723!4.57e-09!436;CL:0000034!1.79e-08!444;CL:0002334!3.38e-08!12;CL:0002371!9.27e-08!591;CL:0000499!1.27e-07!27;CL:0002620!2.01e-07!23;CL:0000136!4.42e-07!15|ontology_enrichment_celltype_v019=CL:0000136;1.32e-12;13!CL:0000135;6.33e-10;3!CL:0000388;6.33e-10;3!CL:0002521;2.61e-09;3!CL:0002615;6.07e-09;3!CL:0000499;2.90e-08;28!CL:0002539;4.28e-07;10!CL:1000306;6.90e-07;4!CL:0002547;6.90e-07;4|ontology_enrichment_celltype_v019_2=CL:0000136,6.32e-17,15;CL:0000048,1.10e-10,427;CL:0000723,2.45e-10,433;CL:0000135,5.15e-10,3;CL:0000388,5.15e-10,3;CL:0000034,6.90e-10,441;CL:0002521,1.42e-09,3;CL:0002615,1.36e-08,3;CL:0000499,2.12e-08,28;CL:0000057,1.73e-07,76;CL:0002539,3.40e-07,10;CL:1000306,6.82e-07,4;CL:0002547,6.82e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002385!2.02e-13!63;UBERON:0001015!2.02e-13!63;UBERON:0000383!2.02e-13!63;UBERON:0000914!6.36e-13!83;UBERON:0002329!6.36e-13!83;UBERON:0003077!6.36e-13!83;UBERON:0003059!6.36e-13!83;UBERON:0007282!6.36e-13!83;UBERON:0009618!6.36e-13!83;UBERON:0007285!6.36e-13!83;UBERON:0001134!7.65e-13!61;UBERON:0002036!7.65e-13!61;UBERON:0003082!7.65e-13!61;UBERON:0004290!6.75e-12!70;UBERON:0000486!1.05e-11!82;UBERON:0001637!4.84e-11!42;UBERON:0003509!4.84e-11!42;UBERON:0004572!4.84e-11!42;UBERON:0005256!1.20e-09!143;UBERON:0002049!3.70e-09!79;UBERON:0007798!3.70e-09!79;UBERON:0004872!9.52e-09!84;UBERON:0001981!1.65e-08!60;UBERON:0007500!1.65e-08!60;UBERON:0004537!1.65e-08!60;UBERON:0006965!1.65e-08!60;UBERON:0000490!1.98e-08!138;UBERON:0002100!3.43e-08!216;UBERON:0000475!5.57e-08!365;UBERON:0004573!7.97e-08!33;UBERON:0004571!7.97e-08!33;UBERON:0001135!9.26e-08!15;UBERON:0003102!1.51e-07!95;UBERON:0004457!2.07e-07!12;UBERON:0000042!2.07e-07!12;UBERON:0004535!7.34e-07!110|ontology_enrichment_uberon_v019=UBERON:0004457;2.23e-14;9!UBERON:0000042;2.23e-14;9!UBERON:0003688;1.86e-11;6!UBERON:0002358;1.86e-11;6!UBERON:0003684;1.86e-11;6!UBERON:0001178;1.86e-11;6!UBERON:0001013;2.10e-11;14!UBERON:0007846;6.33e-10;3!UBERON:0000043;6.33e-10;3!UBERON:0007845;6.33e-10;3!UBERON:0000947;2.51e-09;21!UBERON:0010191;2.51e-09;21!UBERON:0002190;2.61e-09;3!UBERON:0002072;2.99e-09;5!UBERON:0004573;8.10e-09;33!UBERON:0004571;8.10e-09;33!UBERON:0001637;1.94e-08;42!UBERON:0003509;1.94e-08;42!UBERON:0004572;1.94e-08;42!UBERON:0004237;4.28e-07;10!UBERON:0004695;4.28e-07;10!UBERON:0002111;4.28e-07;10!UBERON:0004178;4.28e-07;10!UBERON:0004797;6.90e-07;4!UBERON:0000415;6.90e-07;4!UBERON:0007240;6.90e-07;4!UBERON:0005742;6.90e-07;4!UBERON:0005734;6.90e-07;4!UBERON:0004664;6.90e-07;4!UBERON:0004663;6.90e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.22e-11,14;UBERON:0003688,3.15e-11,6;UBERON:0002358,3.15e-11,6;UBERON:0003684,3.15e-11,6;UBERON:0001178,3.15e-11,6;UBERON:0001637,5.45e-11,42;UBERON:0003509,5.45e-11,42;UBERON:0004572,5.45e-11,42;UBERON:0004457,2.23e-10,12;UBERON:0000042,2.23e-10,12;UBERON:0007846,5.15e-10,3;UBERON:0000043,5.15e-10,3;UBERON:0007845,5.15e-10,3;UBERON:0002072,1.15e-09,5;UBERON:0002190,1.42e-09,3;UBERON:0004573,1.56e-09,33;UBERON:0004571,1.56e-09,33;UBERON:0000947,1.90e-09,21;UBERON:0010191,1.90e-09,21;UBERON:0004237,3.40e-07,10;UBERON:0004695,3.40e-07,10;UBERON:0002111,3.40e-07,10;UBERON:0004178,3.40e-07,10;UBERON:0000415,6.82e-07,4;UBERON:0007240,6.82e-07,4;UBERON:0005742,6.82e-07,4;UBERON:0005734,6.82e-07,4;UBERON:0004664,6.82e-07,4;UBERON:0004663,6.82e-07,4;UBERON:0000926,6.99e-07,315;UBERON:0004120,6.99e-07,315;UBERON:0006603,6.99e-07,315;UBERON:0007500,7.67e-07,59;UBERON:0001981,7.67e-07,59;UBERON:0004537,7.67e-07,59;UBERON:0006965,7.67e-07,59|phase1_expression=0.54503513781167,2.14100523890983,1.26858963686374,1.0007329835313,3.12872766099101,1.74467704820074,2.53299878168311,1.89515962028049,3.3954131665979,0,0,0,0,0.247532705920093,0.662794751455832,0.672325146451775,4.21886169616784,4.38186054232424,1.95173119516203,0.123121058076788,0.204000691244253,0.940364164434263,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50401373190767,0.289693037921647,5.5670016293577,0.973269740605272,0,0.221729397462564,0.08783478569312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,0,1.06090177505535,0,0,0,0.213233981900981,0,0,0,0,0.190941474834495,0.202117188958219,0.217716747896961,1.02669990325584,0,0.286888821570705,0.332660356546013,0,0,1.9307228228694,0,0,0.366724332548599,0,0,0,0|short_description=p@chr16:55539539..55539552,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C351 | |||
|description=CAGE_peak_at_chr16:55539539..55539552,+ | |||
|id=chr16:55539539..55539552,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.08e-32!180;CL:0000057!4.59e-19!75;CL:0000680!5.41e-14!57;CL:0000056!5.41e-14!57;CL:0000355!5.41e-14!57;CL:0000183!4.21e-13!59;CL:0000192!6.08e-13!42;CL:0000514!6.08e-13!42;CL:0000187!1.80e-12!54;CL:0000393!1.18e-10!60;CL:0000211!1.18e-10!60;CL:0000359!4.38e-10!32;CL:0000048!9.65e-10!430;CL:0000723!4.57e-09!436;CL:0000034!1.79e-08!444;CL:0002334!3.38e-08!12;CL:0002371!9.27e-08!591;CL:0000499!1.27e-07!27;CL:0002620!2.01e-07!23;CL:0000136!4.42e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.32e-12;13!CL:0000135;6.33e-10;3!CL:0000388;6.33e-10;3!CL:0002521;2.61e-09;3!CL:0002615;6.07e-09;3!CL:0000499;2.90e-08;28!CL:0002539;4.28e-07;10!CL:1000306;6.90e-07;4!CL:0002547;6.90e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.32e-17,15;CL:0000048,1.10e-10,427;CL:0000723,2.45e-10,433;CL:0000135,5.15e-10,3;CL:0000388,5.15e-10,3;CL:0000034,6.90e-10,441;CL:0002521,1.42e-09,3;CL:0002615,1.36e-08,3;CL:0000499,2.12e-08,28;CL:0000057,1.73e-07,76;CL:0002539,3.40e-07,10;CL:1000306,6.82e-07,4;CL:0002547,6.82e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!2.02e-13!63;UBERON:0001015!2.02e-13!63;UBERON:0000383!2.02e-13!63;UBERON:0000914!6.36e-13!83;UBERON:0002329!6.36e-13!83;UBERON:0003077!6.36e-13!83;UBERON:0003059!6.36e-13!83;UBERON:0007282!6.36e-13!83;UBERON:0009618!6.36e-13!83;UBERON:0007285!6.36e-13!83;UBERON:0001134!7.65e-13!61;UBERON:0002036!7.65e-13!61;UBERON:0003082!7.65e-13!61;UBERON:0004290!6.75e-12!70;UBERON:0000486!1.05e-11!82;UBERON:0001637!4.84e-11!42;UBERON:0003509!4.84e-11!42;UBERON:0004572!4.84e-11!42;UBERON:0005256!1.20e-09!143;UBERON:0002049!3.70e-09!79;UBERON:0007798!3.70e-09!79;UBERON:0004872!9.52e-09!84;UBERON:0001981!1.65e-08!60;UBERON:0007500!1.65e-08!60;UBERON:0004537!1.65e-08!60;UBERON:0006965!1.65e-08!60;UBERON:0000490!1.98e-08!138;UBERON:0002100!3.43e-08!216;UBERON:0000475!5.57e-08!365;UBERON:0004573!7.97e-08!33;UBERON:0004571!7.97e-08!33;UBERON:0001135!9.26e-08!15;UBERON:0003102!1.51e-07!95;UBERON:0004457!2.07e-07!12;UBERON:0000042!2.07e-07!12;UBERON:0004535!7.34e-07!110 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.22e-11,14;UBERON:0003688,3.15e-11,6;UBERON:0002358,3.15e-11,6;UBERON:0003684,3.15e-11,6;UBERON:0001178,3.15e-11,6;UBERON:0001637,5.45e-11,42;UBERON:0003509,5.45e-11,42;UBERON:0004572,5.45e-11,42;UBERON:0004457,2.23e-10,12;UBERON:0000042,2.23e-10,12;UBERON:0007846,5.15e-10,3;UBERON:0000043,5.15e-10,3;UBERON:0007845,5.15e-10,3;UBERON:0002072,1.15e-09,5;UBERON:0002190,1.42e-09,3;UBERON:0004573,1.56e-09,33;UBERON:0004571,1.56e-09,33;UBERON:0000947,1.90e-09,21;UBERON:0010191,1.90e-09,21;UBERON:0004237,3.40e-07,10;UBERON:0004695,3.40e-07,10;UBERON:0002111,3.40e-07,10;UBERON:0004178,3.40e-07,10;UBERON:0000415,6.82e-07,4;UBERON:0007240,6.82e-07,4;UBERON:0005742,6.82e-07,4;UBERON:0005734,6.82e-07,4;UBERON:0004664,6.82e-07,4;UBERON:0004663,6.82e-07,4;UBERON:0000926,6.99e-07,315;UBERON:0004120,6.99e-07,315;UBERON:0006603,6.99e-07,315;UBERON:0007500,7.67e-07,59;UBERON:0001981,7.67e-07,59;UBERON:0004537,7.67e-07,59;UBERON:0006965,7.67e-07,59 | |||
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| |||
|short_description=p@chr16:55539539..55539552,+ | |||
}} |
Revision as of 10:45, 11 September 2013
Short description: | p@chr16:55539539..55539552, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:55539539..55539552, + |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.32e-17 | 15 |
multi fate stem cell | 1.10e-10 | 427 |
somatic stem cell | 2.45e-10 | 433 |
fibrocyte | 5.15e-10 | 3 |
tendon cell | 5.15e-10 | 3 |
stem cell | 6.90e-10 | 441 |
subcutaneous fat cell | 1.42e-09 | 3 |
adipocyte of omentum tissue | 1.36e-08 | 3 |
stromal cell | 2.12e-08 | 28 |
fibroblast | 1.73e-07 | 76 |
aortic smooth muscle cell | 3.40e-07 | 10 |
fibroblast of tunica adventitia of artery | 6.82e-07 | 4 |
fibroblast of the aortic adventitia | 6.82e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.