FFCP PHASE1:Hg19::chr16:89043377..89043406,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=863|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1537|TSSclassifier=S|UniProt=E7EU24,O75081|association_with_transcript=0bp_to_ENST00000360302,ENST00000436887,ENST00000448839,uc002fmm.1,uc002fmn.1_5end|coexpression_cluster_id=C1340|description=CAGE_peak_2_at_CBFA2T3_5end|id=chr16:89043377..89043406,-|ontology_enrichment_celltype=CL:0000037!6.69e-52!172;CL:0000566!6.69e-52!172;CL:0000988!4.63e-47!182;CL:0002032!5.16e-47!165;CL:0000837!5.16e-47!165;CL:0000763!8.99e-38!112;CL:0000049!8.99e-38!112;CL:0000738!3.53e-23!140;CL:0002031!5.57e-21!124;CL:0002087!6.58e-19!119;CL:0000945!1.61e-14!24;CL:0000826!1.61e-14!24;CL:0000839!5.15e-14!70;CL:0000766!2.05e-13!76;CL:0000557!1.25e-12!71;CL:0000236!3.41e-11!14;CL:0002194!3.62e-09!63;CL:0000576!3.62e-09!63;CL:0000040!3.62e-09!63;CL:0000559!3.62e-09!63;CL:0000542!9.33e-09!53;CL:0000051!9.33e-09!53;CL:0002009!1.28e-08!65;CL:0000134!2.08e-08!358;CL:0000838!3.90e-08!52;CL:0002320!9.15e-08!365;CL:0002274!3.43e-07!5;CL:0000457!3.43e-07!5;CL:0002191!3.43e-07!5;CL:0000097!3.43e-07!5;CL:0000831!3.43e-07!5;CL:0002028!3.43e-07!5|ontology_enrichment_celltype_v019=CL:0000945;3.34e-20;24!CL:0000236;3.75e-19;13!CL:0000097;3.59e-12;5!CL:0000763;1.93e-10;100!CL:0000542;2.57e-08;53!CL:0000784;3.66e-08;3!CL:0000988;1.63e-07;177|ontology_enrichment_celltype_v019_2=CL:0000037,4.03e-45,168;CL:0000988,5.89e-42,177;CL:0002032,8.80e-41,161;CL:0000837,8.80e-41,161;CL:0000763,3.99e-29,108;CL:0000049,3.99e-29,108;CL:0000945,3.09e-20,24;CL:0000826,3.09e-20,24;CL:0000236,1.14e-17,14;CL:0000134,1.38e-12,354;CL:0000097,2.69e-12,5;CL:0002028,2.69e-12,5;CL:0002320,4.97e-12,361;CL:0000738,1.22e-10,136;CL:0000542,1.64e-10,53;CL:0000051,1.64e-10,53;CL:0002031,1.72e-10,120;CL:0000219,4.38e-10,386;CL:0000838,1.60e-09,52;CL:0000034,1.05e-08,441;CL:0000784,3.63e-08,3;CL:0000048,9.42e-08,427;CL:0000723,1.95e-07,433;CL:0002087,7.90e-07,115|ontology_enrichment_development_v019=CL:0000051;2.57e-08;53!CL:0000049;5.98e-08;108|ontology_enrichment_disease=DOID:8692!1.71e-35!31;DOID:1240!3.11e-34!39;DOID:2531!4.87e-26!51;DOID:0060083!4.87e-26!51;DOID:1036!1.39e-08!8|ontology_enrichment_disease_v019=DOID:8692;1.81e-57;31!DOID:1240;1.60e-48;39!DOID:2531;6.94e-29;51!DOID:0060083;6.94e-29;51!DOID:1036;2.02e-15;8|ontology_enrichment_disease_v019_2=DOID:1240,1.05e-59,39;DOID:8692,1.88e-59,31;DOID:2531,4.88e-46,51;DOID:0060083,4.88e-46,51;DOID:1036,2.01e-15,8;DOID:0050686,6.89e-11,137|ontology_enrichment_uberon=UBERON:0002390!9.55e-17!102;UBERON:0003061!9.55e-17!102;UBERON:0007023!7.18e-16!115;UBERON:0002193!1.40e-15!112;UBERON:0002371!7.21e-11!80;UBERON:0001474!2.43e-09!86;UBERON:0002405!2.27e-08!115;UBERON:0002384!2.95e-07!375|ontology_enrichment_uberon_v019=UBERON:0004177;1.27e-07;5!UBERON:0005057;1.27e-07;5!UBERON:0002390;5.57e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.83e-11,371;UBERON:0002193,4.99e-07,108;UBERON:0002390,9.21e-07,98;UBERON:0003061,9.21e-07,98|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36881557818649,1.64201178899891,2.12519109546934,1.18009283054671,0,0.619264493264304,0,0,0,2.09161441566814,0,11.7440175733939,2.21598163412751,0.401088894940283,1.08505435357926,0.671746422719773,1.6194683300949,1.28787783817093,0.145398238779565,0,0,0.232429036905685,0,0.619412741790207,0,0.768482119587302,0.47296445977717,0,0,0,0.376484679085209,0.272906150057846,0.674170453335254,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0.868755378820466,0,0.368277635987565,0,0.422510572623884,0.850417199860174,0.628975936525128,0.22465726229299,0.450530678524519,0.48217676009124,0.855038231223746,0.59675003159727,0,0,3.82297027883492,3.55803701545422,2.56038133539904,5.60554381850417,2.87376219977242,3.96626923670917,2.86216126360609,2.27685187643779,3.52342313622563,2.6759125968766,23.7908391442247,20.7388168303168,9.74521113667785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0.383959833463255,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0.696518949197069,0.531831842075461,8.82415309929765,7.43593384014166,12.2580975438756,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0,0,0,0,0,0,0,1.97065295158377,6.16339038092582,13.2689993946094,11.38547631994,14.7703647108865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.86669444906706,7.32019262869721,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=863 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1537 | |||
|TSSclassifier=S | |||
|UniProt=E7EU24,O75081 | |||
|association_with_transcript=0bp_to_ENST00000360302,ENST00000436887,ENST00000448839,uc002fmm.1,uc002fmn.1_5end | |||
|coexpression_cluster_id=C1340 | |||
|description=CAGE_peak_2_at_CBFA2T3_5end | |||
|id=chr16:89043377..89043406,- | |||
|ontology_enrichment_celltype=CL:0000037!6.69e-52!172;CL:0000566!6.69e-52!172;CL:0000988!4.63e-47!182;CL:0002032!5.16e-47!165;CL:0000837!5.16e-47!165;CL:0000763!8.99e-38!112;CL:0000049!8.99e-38!112;CL:0000738!3.53e-23!140;CL:0002031!5.57e-21!124;CL:0002087!6.58e-19!119;CL:0000945!1.61e-14!24;CL:0000826!1.61e-14!24;CL:0000839!5.15e-14!70;CL:0000766!2.05e-13!76;CL:0000557!1.25e-12!71;CL:0000236!3.41e-11!14;CL:0002194!3.62e-09!63;CL:0000576!3.62e-09!63;CL:0000040!3.62e-09!63;CL:0000559!3.62e-09!63;CL:0000542!9.33e-09!53;CL:0000051!9.33e-09!53;CL:0002009!1.28e-08!65;CL:0000134!2.08e-08!358;CL:0000838!3.90e-08!52;CL:0002320!9.15e-08!365;CL:0002274!3.43e-07!5;CL:0000457!3.43e-07!5;CL:0002191!3.43e-07!5;CL:0000097!3.43e-07!5;CL:0000831!3.43e-07!5;CL:0002028!3.43e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.34e-20;24!CL:0000236;3.75e-19;13!CL:0000097;3.59e-12;5!CL:0000763;1.93e-10;100!CL:0000542;2.57e-08;53!CL:0000784;3.66e-08;3!CL:0000988;1.63e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.03e-45,168;CL:0000988,5.89e-42,177;CL:0002032,8.80e-41,161;CL:0000837,8.80e-41,161;CL:0000763,3.99e-29,108;CL:0000049,3.99e-29,108;CL:0000945,3.09e-20,24;CL:0000826,3.09e-20,24;CL:0000236,1.14e-17,14;CL:0000134,1.38e-12,354;CL:0000097,2.69e-12,5;CL:0002028,2.69e-12,5;CL:0002320,4.97e-12,361;CL:0000738,1.22e-10,136;CL:0000542,1.64e-10,53;CL:0000051,1.64e-10,53;CL:0002031,1.72e-10,120;CL:0000219,4.38e-10,386;CL:0000838,1.60e-09,52;CL:0000034,1.05e-08,441;CL:0000784,3.63e-08,3;CL:0000048,9.42e-08,427;CL:0000723,1.95e-07,433;CL:0002087,7.90e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000051;2.57e-08;53!CL:0000049;5.98e-08;108 | |||
|ontology_enrichment_disease=DOID:8692!1.71e-35!31;DOID:1240!3.11e-34!39;DOID:2531!4.87e-26!51;DOID:0060083!4.87e-26!51;DOID:1036!1.39e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.81e-57;31!DOID:1240;1.60e-48;39!DOID:2531;6.94e-29;51!DOID:0060083;6.94e-29;51!DOID:1036;2.02e-15;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.05e-59,39;DOID:8692,1.88e-59,31;DOID:2531,4.88e-46,51;DOID:0060083,4.88e-46,51;DOID:1036,2.01e-15,8;DOID:0050686,6.89e-11,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.55e-17!102;UBERON:0003061!9.55e-17!102;UBERON:0007023!7.18e-16!115;UBERON:0002193!1.40e-15!112;UBERON:0002371!7.21e-11!80;UBERON:0001474!2.43e-09!86;UBERON:0002405!2.27e-08!115;UBERON:0002384!2.95e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;1.27e-07;5!UBERON:0005057;1.27e-07;5!UBERON:0002390;5.57e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.83e-11,371;UBERON:0002193,4.99e-07,108;UBERON:0002390,9.21e-07,98;UBERON:0003061,9.21e-07,98 | |||
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|short_description=p2@CBFA2T3 | |||
}} |
Revision as of 12:04, 11 September 2013
Short description: | p2@CBFA2T3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CBFA2T3_5end |
Coexpression cluster: | C1340_acute_chronic_granulocyte_leukemia_CD34_Mast_Dendritic |
Association with transcript: | 0bp_to_ENST00000360302, ENST00000436887, ENST00000448839, uc002fmm.1, uc002fmn.1_5end |
EntrezGene: | CBFA2T3 |
HGNC: | 1537 |
UniProt: | E7EU24O75081 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.03e-45 | 168 |
hematopoietic cell | 5.89e-42 | 177 |
hematopoietic oligopotent progenitor cell | 8.80e-41 | 161 |
hematopoietic multipotent progenitor cell | 8.80e-41 | 161 |
myeloid cell | 3.99e-29 | 108 |
common myeloid progenitor | 3.99e-29 | 108 |
lymphocyte of B lineage | 3.09e-20 | 24 |
pro-B cell | 3.09e-20 | 24 |
B cell | 1.14e-17 | 14 |
mesenchymal cell | 1.38e-12 | 354 |
mast cell | 2.69e-12 | 5 |
basophil mast progenitor cell | 2.69e-12 | 5 |
connective tissue cell | 4.97e-12 | 361 |
leukocyte | 1.22e-10 | 136 |
lymphocyte | 1.64e-10 | 53 |
common lymphoid progenitor | 1.64e-10 | 53 |
hematopoietic lineage restricted progenitor cell | 1.72e-10 | 120 |
motile cell | 4.38e-10 | 386 |
lymphoid lineage restricted progenitor cell | 1.60e-09 | 52 |
stem cell | 1.05e-08 | 441 |
plasmacytoid dendritic cell | 3.63e-08 | 3 |
multi fate stem cell | 9.42e-08 | 427 |
somatic stem cell | 1.95e-07 | 433 |
nongranular leukocyte | 7.90e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.83e-11 | 371 |
hemolymphoid system | 4.99e-07 | 108 |
hematopoietic system | 9.21e-07 | 98 |
blood island | 9.21e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.05e-59 | 39 |
myeloid leukemia | 1.88e-59 | 31 |
hematologic cancer | 4.88e-46 | 51 |
immune system cancer | 4.88e-46 | 51 |
chronic leukemia | 2.01e-15 | 8 |
organ system cancer | 6.89e-11 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.