FFCP PHASE1:Hg19::chr17:7082668..7082725,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=432|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=742|TSSclassifier=W|UniProt=P07306,F8W7M3,Q6FGQ5|association_with_transcript=157bp_to_ENST00000269299,NM_001197216,NM_001671,uc002ges.3_5end|coexpression_cluster_id=C5|description=CAGE_peak_1_at_ASGR1_5end|id=chr17:7082668..7082725,-|ontology_enrichment_celltype=CL:0000181!5.21e-25!12;CL:0000417!5.21e-25!12;CL:0000668!5.21e-25!12;CL:0000414!5.21e-25!12;CL:0000412!5.21e-25!12;CL:0000182!5.21e-25!12;CL:0002322!8.31e-09!5;CL:0000223!9.39e-08!59|ontology_enrichment_celltype_v019=CL:0000182;4.56e-48;12!CL:0002563;5.97e-10;4|ontology_enrichment_celltype_v019_2=CL:0000182,4.70e-48,12;CL:0000223,2.32e-17,58;CL:0002563,5.97e-10,4|ontology_enrichment_development_v019=UBERON:0004161;7.91e-52;11!UBERON:0009497;9.88e-44;13!UBERON:0003104;8.55e-22;31!UBERON:0001041;1.77e-18;30!CL:0000223;5.51e-11;58!UBERON:0006242;4.14e-10;1|ontology_enrichment_disease=DOID:114!5.09e-10!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!5.89e-29!19;UBERON:0006925!5.89e-29!19;UBERON:0008836!5.89e-29!19;UBERON:0009497!1.57e-25!25;UBERON:0000015!1.57e-25!25;UBERON:0002423!1.57e-25!25;UBERON:0006235!1.57e-25!25;UBERON:0004161!1.57e-25!25;UBERON:0008835!1.09e-24!22;UBERON:0003894!1.09e-24!22;UBERON:0005057!2.30e-24!26;UBERON:0009854!1.63e-23!23;UBERON:0007499!1.91e-21!25;UBERON:0009856!1.56e-20!26;UBERON:0002365!7.61e-17!31;UBERON:0002330!7.61e-17!31;UBERON:0003929!9.24e-17!54;UBERON:0005172!4.54e-16!55;UBERON:0005173!4.54e-16!55;UBERON:0004921!4.15e-15!129;UBERON:0004185!4.15e-15!129;UBERON:0002368!1.18e-14!35;UBERON:0002417!3.74e-14!61;UBERON:0000916!3.74e-14!61;UBERON:0000949!5.38e-13!45;UBERON:0001007!6.38e-13!155;UBERON:0001555!6.38e-13!155;UBERON:0007026!6.38e-13!155;UBERON:0005911!2.12e-11!82;UBERON:0004119!2.17e-11!169;UBERON:0000925!2.17e-11!169;UBERON:0006595!2.17e-11!169;UBERON:0005409!1.25e-10!35;UBERON:0001041!4.93e-10!98;UBERON:0000077!7.14e-10!130;UBERON:0002530!2.35e-09!59;UBERON:0005177!6.63e-09!107;UBERON:0009569!3.67e-07!113;UBERON:0000160!4.89e-07!27|ontology_enrichment_uberon_v019=UBERON:0002107;4.79e-47;19!UBERON:0006925;4.79e-47;19!UBERON:0002423;1.09e-42;25!UBERON:0002365;1.29e-27;31!UBERON:0002330;1.29e-27;31!UBERON:0002368;5.16e-24;33!UBERON:0000949;4.33e-15;43!UBERON:0005172;6.94e-12;52!UBERON:0005173;6.94e-12;52!UBERON:0002530;2.29e-10;57!UBERON:0001242;5.97e-10;4!UBERON:0001262;5.97e-10;4!UBERON:0004786;5.97e-10;4!UBERON:0004808;5.97e-10;4!UBERON:0001277;5.97e-10;4!UBERON:0002417;8.41e-10;58!UBERON:0000916;8.41e-10;58!UBERON:0001007;3.52e-08;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.91e-47,19;UBERON:0006925,4.91e-47,19;UBERON:0008836,4.91e-47,19;UBERON:0009497,1.09e-42,25;UBERON:0000015,1.09e-42,25;UBERON:0002423,1.09e-42,25;UBERON:0006235,1.09e-42,25;UBERON:0004161,1.09e-42,25;UBERON:0008835,1.95e-40,22;UBERON:0003894,1.95e-40,22;UBERON:0009854,1.28e-38,23;UBERON:0007499,2.03e-35,25;UBERON:0009856,5.29e-34,26;UBERON:0003929,7.40e-31,54;UBERON:0002365,2.73e-28,31;UBERON:0002330,2.73e-28,31;UBERON:0002368,6.81e-25,35;UBERON:0005911,1.44e-22,82;UBERON:0000949,4.89e-19,45;UBERON:0005172,7.11e-19,54;UBERON:0005173,7.11e-19,54;UBERON:0002530,3.52e-17,59;UBERON:0002417,8.14e-17,60;UBERON:0000916,8.14e-17,60;UBERON:0004921,9.25e-13,118;UBERON:0001007,1.40e-11,145;UBERON:0001555,1.40e-11,145;UBERON:0007026,1.40e-11,145;UBERON:0005177,3.99e-11,101;UBERON:0001041,4.51e-11,87;UBERON:0004119,2.89e-10,160;UBERON:0000925,2.89e-10,160;UBERON:0006595,2.89e-10,160;UBERON:0001242,5.97e-10,4;UBERON:0001262,5.97e-10,4;UBERON:0004786,5.97e-10,4;UBERON:0004808,5.97e-10,4;UBERON:0001277,5.97e-10,4;UBERON:0009569,7.70e-10,112;UBERON:0000490,8.70e-10,148;UBERON:0005256,6.92e-09,122;UBERON:0003914,8.97e-08,117;UBERON:0003104,1.62e-07,160;UBERON:0009142,1.62e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70272798147026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04574548582567,0.725627385107593,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,637.577825153809,570.039785673023,606.741234161802,0,36.4045778087616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.82273982018842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,187.122477152264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=432 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=742 | |||
|TSSclassifier=W | |||
|UniProt=P07306,F8W7M3,Q6FGQ5 | |||
|association_with_transcript=157bp_to_ENST00000269299,NM_001197216,NM_001671,uc002ges.3_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_ASGR1_5end | |||
|id=chr17:7082668..7082725,- | |||
|ontology_enrichment_celltype=CL:0000181!5.21e-25!12;CL:0000417!5.21e-25!12;CL:0000668!5.21e-25!12;CL:0000414!5.21e-25!12;CL:0000412!5.21e-25!12;CL:0000182!5.21e-25!12;CL:0002322!8.31e-09!5;CL:0000223!9.39e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.56e-48;12!CL:0002563;5.97e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.70e-48,12;CL:0000223,2.32e-17,58;CL:0002563,5.97e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.91e-52;11!UBERON:0009497;9.88e-44;13!UBERON:0003104;8.55e-22;31!UBERON:0001041;1.77e-18;30!CL:0000223;5.51e-11;58!UBERON:0006242;4.14e-10;1 | |||
|ontology_enrichment_disease=DOID:114!5.09e-10!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.89e-29!19;UBERON:0006925!5.89e-29!19;UBERON:0008836!5.89e-29!19;UBERON:0009497!1.57e-25!25;UBERON:0000015!1.57e-25!25;UBERON:0002423!1.57e-25!25;UBERON:0006235!1.57e-25!25;UBERON:0004161!1.57e-25!25;UBERON:0008835!1.09e-24!22;UBERON:0003894!1.09e-24!22;UBERON:0005057!2.30e-24!26;UBERON:0009854!1.63e-23!23;UBERON:0007499!1.91e-21!25;UBERON:0009856!1.56e-20!26;UBERON:0002365!7.61e-17!31;UBERON:0002330!7.61e-17!31;UBERON:0003929!9.24e-17!54;UBERON:0005172!4.54e-16!55;UBERON:0005173!4.54e-16!55;UBERON:0004921!4.15e-15!129;UBERON:0004185!4.15e-15!129;UBERON:0002368!1.18e-14!35;UBERON:0002417!3.74e-14!61;UBERON:0000916!3.74e-14!61;UBERON:0000949!5.38e-13!45;UBERON:0001007!6.38e-13!155;UBERON:0001555!6.38e-13!155;UBERON:0007026!6.38e-13!155;UBERON:0005911!2.12e-11!82;UBERON:0004119!2.17e-11!169;UBERON:0000925!2.17e-11!169;UBERON:0006595!2.17e-11!169;UBERON:0005409!1.25e-10!35;UBERON:0001041!4.93e-10!98;UBERON:0000077!7.14e-10!130;UBERON:0002530!2.35e-09!59;UBERON:0005177!6.63e-09!107;UBERON:0009569!3.67e-07!113;UBERON:0000160!4.89e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.79e-47;19!UBERON:0006925;4.79e-47;19!UBERON:0002423;1.09e-42;25!UBERON:0002365;1.29e-27;31!UBERON:0002330;1.29e-27;31!UBERON:0002368;5.16e-24;33!UBERON:0000949;4.33e-15;43!UBERON:0005172;6.94e-12;52!UBERON:0005173;6.94e-12;52!UBERON:0002530;2.29e-10;57!UBERON:0001242;5.97e-10;4!UBERON:0001262;5.97e-10;4!UBERON:0004786;5.97e-10;4!UBERON:0004808;5.97e-10;4!UBERON:0001277;5.97e-10;4!UBERON:0002417;8.41e-10;58!UBERON:0000916;8.41e-10;58!UBERON:0001007;3.52e-08;81 | |||
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|short_description=p1@ASGR1 | |||
}} |
Revision as of 15:24, 11 September 2013
Short description: | p1@ASGR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ASGR1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 157bp_to_ENST00000269299, NM_001197216, NM_001671, uc002ges.3_5end |
EntrezGene: | ASGR1 |
HGNC: | 742 |
UniProt: | P07306F8W7M3Q6FGQ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.70e-48 | 12 |
endodermal cell | 2.32e-17 | 58 |
intestinal epithelial cell | 5.97e-10 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.