FFCP PHASE1:Hg19::chr17:79795700..79795722,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1176|description=CAGE_peak_at_chr17:79795700..79795722,-|id=chr17:79795700..79795722,-|ontology_enrichment_celltype=CL:0000763!3.26e-49!112;CL:0000049!3.26e-49!112;CL:0002057!2.36e-38!42;CL:0000037!1.03e-36!172;CL:0000566!1.03e-36!172;CL:0000860!2.30e-35!45;CL:0000988!4.63e-34!182;CL:0000766!3.63e-33!76;CL:0002032!1.23e-31!165;CL:0000837!1.23e-31!165;CL:0002194!2.00e-30!63;CL:0000576!2.00e-30!63;CL:0000040!2.00e-30!63;CL:0000559!2.00e-30!63;CL:0002009!2.76e-29!65;CL:0000839!6.51e-29!70;CL:0000557!1.23e-28!71;CL:0002393!4.01e-28!9;CL:0002397!4.01e-28!9;CL:0000738!1.36e-19!140;CL:0002087!3.55e-18!119;CL:0002031!1.53e-14!124;CL:0000134!3.28e-13!358;CL:0002320!9.96e-13!365;CL:0000219!4.95e-11!390;CL:0000842!5.19e-10!3;CL:0000875!8.86e-10!3;CL:0002396!8.86e-10!3;CL:0000048!5.18e-09!430;CL:0000723!1.00e-08!436;CL:0000034!2.34e-08!444;CL:0000771!4.36e-08!2;CL:0000224!1.30e-07!4;CL:0000094!6.51e-07!8|ontology_enrichment_celltype_v019=CL:0000771;4.53e-19;2!CL:0002393;5.16e-14;6!CL:0002397;5.16e-14;6!CL:0002032;1.03e-10;1!CL:0000557;1.03e-10;1!CL:0000037;3.29e-10;1!CL:0001024;3.29e-10;1!CL:0000763;3.45e-10;100!CL:0000576;7.18e-10;48|ontology_enrichment_celltype_v019_2=CL:0000763,2.13e-30,108;CL:0000049,2.13e-30,108;CL:0000037,1.10e-20,168;CL:0000988,1.75e-19,177;CL:0002032,1.75e-19,161;CL:0000837,1.75e-19,161;CL:0000771,4.53e-19,2;CL:0000766,7.04e-16,72;CL:0000557,2.14e-14,67;CL:0002194,1.43e-13,59;CL:0000576,1.43e-13,59;CL:0000040,1.43e-13,59;CL:0000559,1.43e-13,59;CL:0002009,4.38e-13,61;CL:0000839,5.36e-12,66;CL:0001024,3.61e-10,1;CL:0000860,1.03e-09,42;CL:0002057,1.03e-09,42;CL:0002393,1.54e-09,9;CL:0002397,1.54e-09,9;CL:0000134,2.93e-09,354;CL:0002320,5.13e-09,361;CL:0000473,2.08e-08,48;CL:0000234,2.08e-08,48;CL:0000219,3.71e-08,386;CL:0000738,1.49e-07,136;CL:0000048,4.21e-07,427;CL:0000723,5.89e-07,433;CL:0000034,9.09e-07,441|ontology_enrichment_development_v019=CL:0000049;4.67e-13;108!CL:0002057;1.46e-07;42|ontology_enrichment_disease=DOID:8692!1.54e-21!31;DOID:1240!2.48e-16!39;DOID:2531!2.35e-13!51;DOID:0060083!2.35e-13!51|ontology_enrichment_disease_v019=DOID:8692;4.84e-27;31!DOID:1240;1.41e-18;39!DOID:2531;2.76e-10;51!DOID:0060083;2.76e-10;51|ontology_enrichment_disease_v019_2=DOID:8692,2.98e-28,31;DOID:1240,3.67e-22,39;DOID:2531,1.34e-16,51;DOID:0060083,1.34e-16,51|ontology_enrichment_uberon=UBERON:0002390!5.29e-28!102;UBERON:0003061!5.29e-28!102;UBERON:0002371!9.35e-27!80;UBERON:0002193!9.59e-25!112;UBERON:0001474!2.22e-24!86;UBERON:0004765!1.12e-19!101;UBERON:0001434!1.12e-19!101;UBERON:0002405!4.10e-19!115;UBERON:0002384!4.52e-12!375;UBERON:0002204!5.79e-10!167;UBERON:0003081!1.26e-09!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.84e-15,76;UBERON:0001474,9.70e-14,82;UBERON:0004765,2.32e-12,90;UBERON:0002405,6.62e-12,93;UBERON:0002390,3.31e-11,98;UBERON:0003061,3.31e-11,98;UBERON:0001434,6.04e-11,100;UBERON:0002193,5.33e-10,108;UBERON:0002384,1.10e-08,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.464448369948228,0,0,0,0,0,1.17440175733939,1.10799081706375,2.20598892217156,0.868043482863407,0,0,0,0,0,0,0.697287110717054,0,0,0,0,0.47296445977717,0.689491361473237,1.93645405075148,1.35426486594342,0,0,0.224723484445085,0.306083892370903,0,0.639337125799041,0,0,0,0.580418477257168,0,0,0,1.0429658368404,0.217188844705117,0,0.736555271975129,0,0.845021145247767,1.70083439972035,0.628975936525128,2.13424399178341,0.450530678524519,0.16072558669708,0.570025487482497,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.862856803274467,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0.649243880549111,0.561594356226918,2.05411211129873,0,2.50634477090067,0,7.54763952987388,17.7583742328122,0.851692475380653,1.03051603426729,5.8375745218607,4.69719826574073,6.17341824334061,2.73543333562856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824019371133798,0,0,0,0,0,0,0,0,0,8.696730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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1176 | |||
|description=CAGE_peak_at_chr17:79795700..79795722,- | |||
|id=chr17:79795700..79795722,- | |||
|ontology_enrichment_celltype=CL:0000763!3.26e-49!112;CL:0000049!3.26e-49!112;CL:0002057!2.36e-38!42;CL:0000037!1.03e-36!172;CL:0000566!1.03e-36!172;CL:0000860!2.30e-35!45;CL:0000988!4.63e-34!182;CL:0000766!3.63e-33!76;CL:0002032!1.23e-31!165;CL:0000837!1.23e-31!165;CL:0002194!2.00e-30!63;CL:0000576!2.00e-30!63;CL:0000040!2.00e-30!63;CL:0000559!2.00e-30!63;CL:0002009!2.76e-29!65;CL:0000839!6.51e-29!70;CL:0000557!1.23e-28!71;CL:0002393!4.01e-28!9;CL:0002397!4.01e-28!9;CL:0000738!1.36e-19!140;CL:0002087!3.55e-18!119;CL:0002031!1.53e-14!124;CL:0000134!3.28e-13!358;CL:0002320!9.96e-13!365;CL:0000219!4.95e-11!390;CL:0000842!5.19e-10!3;CL:0000875!8.86e-10!3;CL:0002396!8.86e-10!3;CL:0000048!5.18e-09!430;CL:0000723!1.00e-08!436;CL:0000034!2.34e-08!444;CL:0000771!4.36e-08!2;CL:0000224!1.30e-07!4;CL:0000094!6.51e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000771;4.53e-19;2!CL:0002393;5.16e-14;6!CL:0002397;5.16e-14;6!CL:0002032;1.03e-10;1!CL:0000557;1.03e-10;1!CL:0000037;3.29e-10;1!CL:0001024;3.29e-10;1!CL:0000763;3.45e-10;100!CL:0000576;7.18e-10;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.13e-30,108;CL:0000049,2.13e-30,108;CL:0000037,1.10e-20,168;CL:0000988,1.75e-19,177;CL:0002032,1.75e-19,161;CL:0000837,1.75e-19,161;CL:0000771,4.53e-19,2;CL:0000766,7.04e-16,72;CL:0000557,2.14e-14,67;CL:0002194,1.43e-13,59;CL:0000576,1.43e-13,59;CL:0000040,1.43e-13,59;CL:0000559,1.43e-13,59;CL:0002009,4.38e-13,61;CL:0000839,5.36e-12,66;CL:0001024,3.61e-10,1;CL:0000860,1.03e-09,42;CL:0002057,1.03e-09,42;CL:0002393,1.54e-09,9;CL:0002397,1.54e-09,9;CL:0000134,2.93e-09,354;CL:0002320,5.13e-09,361;CL:0000473,2.08e-08,48;CL:0000234,2.08e-08,48;CL:0000219,3.71e-08,386;CL:0000738,1.49e-07,136;CL:0000048,4.21e-07,427;CL:0000723,5.89e-07,433;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000049;4.67e-13;108!CL:0002057;1.46e-07;42 | |||
|ontology_enrichment_disease=DOID:8692!1.54e-21!31;DOID:1240!2.48e-16!39;DOID:2531!2.35e-13!51;DOID:0060083!2.35e-13!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.84e-27;31!DOID:1240;1.41e-18;39!DOID:2531;2.76e-10;51!DOID:0060083;2.76e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.98e-28,31;DOID:1240,3.67e-22,39;DOID:2531,1.34e-16,51;DOID:0060083,1.34e-16,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.29e-28!102;UBERON:0003061!5.29e-28!102;UBERON:0002371!9.35e-27!80;UBERON:0002193!9.59e-25!112;UBERON:0001474!2.22e-24!86;UBERON:0004765!1.12e-19!101;UBERON:0001434!1.12e-19!101;UBERON:0002405!4.10e-19!115;UBERON:0002384!4.52e-12!375;UBERON:0002204!5.79e-10!167;UBERON:0003081!1.26e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.84e-15,76;UBERON:0001474,9.70e-14,82;UBERON:0004765,2.32e-12,90;UBERON:0002405,6.62e-12,93;UBERON:0002390,3.31e-11,98;UBERON:0003061,3.31e-11,98;UBERON:0001434,6.04e-11,100;UBERON:0002193,5.33e-10,108;UBERON:0002384,1.10e-08,371 | |||
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|short_description=p@chr17:79795700..79795722,- | |||
}} |
Revision as of 16:27, 11 September 2013
Short description: | p@chr17:79795700..79795722, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:79795700..79795722, - |
Coexpression cluster: | C1176_acute_biphenotypic_Adipocyte_myelodysplastic_Preadipocyte_CD14_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.13e-30 | 108 |
common myeloid progenitor | 2.13e-30 | 108 |
hematopoietic stem cell | 1.10e-20 | 168 |
hematopoietic cell | 1.75e-19 | 177 |
hematopoietic oligopotent progenitor cell | 1.75e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.75e-19 | 161 |
eosinophil | 4.53e-19 | 2 |
myeloid leukocyte | 7.04e-16 | 72 |
granulocyte monocyte progenitor cell | 2.14e-14 | 67 |
monopoietic cell | 1.43e-13 | 59 |
monocyte | 1.43e-13 | 59 |
monoblast | 1.43e-13 | 59 |
promonocyte | 1.43e-13 | 59 |
macrophage dendritic cell progenitor | 4.38e-13 | 61 |
myeloid lineage restricted progenitor cell | 5.36e-12 | 66 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.61e-10 | 1 |
classical monocyte | 1.03e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.03e-09 | 42 |
intermediate monocyte | 1.54e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.54e-09 | 9 |
mesenchymal cell | 2.93e-09 | 354 |
connective tissue cell | 5.13e-09 | 361 |
defensive cell | 2.08e-08 | 48 |
phagocyte | 2.08e-08 | 48 |
motile cell | 3.71e-08 | 386 |
leukocyte | 1.49e-07 | 136 |
multi fate stem cell | 4.21e-07 | 427 |
somatic stem cell | 5.89e-07 | 433 |
stem cell | 9.09e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.84e-15 | 76 |
bone element | 9.70e-14 | 82 |
skeletal element | 2.32e-12 | 90 |
immune system | 6.62e-12 | 93 |
hematopoietic system | 3.31e-11 | 98 |
blood island | 3.31e-11 | 98 |
skeletal system | 6.04e-11 | 100 |
hemolymphoid system | 5.33e-10 | 108 |
connective tissue | 1.10e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.98e-28 | 31 |
leukemia | 3.67e-22 | 39 |
hematologic cancer | 1.34e-16 | 51 |
immune system cancer | 1.34e-16 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.