FFCP PHASE1:Hg19::chr19:6718125..6718152,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C5|description=CAGE_peak_at_chr19:6718125..6718152,+|id=chr19:6718125..6718152,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;7.08e-22;12!CL:0000214;2.28e-08;3!CL:0000511;4.68e-07;1!CL:0002625;4.68e-07;1!CL:0000216;4.68e-07;1|ontology_enrichment_celltype_v019_2=CL:0000182,7.47e-22,12;CL:0000214,2.64e-08,3;CL:0000511,4.69e-07,1;CL:0002625,4.69e-07,1;CL:0000216,4.69e-07,1;CL:1001319,9.25e-07,1;CL:1000600,9.25e-07,1|ontology_enrichment_development_v019=UBERON:0004161;1.15e-17;11!UBERON:0009497;7.32e-15;13!UBERON:0003104;6.29e-08;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.30e-14!115;UBERON:0000477!1.56e-09!286;UBERON:0009854!2.10e-09!23;UBERON:0004111!2.40e-09!241;UBERON:0000483!3.34e-09!309;UBERON:0003929!4.90e-09!54;UBERON:0000025!6.61e-09!194;UBERON:0000119!6.87e-09!312;UBERON:0008835!1.30e-08!22;UBERON:0003894!1.30e-08!22;UBERON:0009497!4.02e-08!25;UBERON:0000015!4.02e-08!25;UBERON:0002423!4.02e-08!25;UBERON:0006235!4.02e-08!25;UBERON:0004161!4.02e-08!25;UBERON:0000481!5.74e-08!347;UBERON:0009856!8.66e-08!26;UBERON:0007499!4.44e-07!25;UBERON:0002107!7.12e-07!19;UBERON:0006925!7.12e-07!19;UBERON:0008836!7.12e-07!19|ontology_enrichment_uberon_v019=UBERON:0002107;1.76e-22;19!UBERON:0006925;1.76e-22;19!UBERON:0002423;1.03e-16;25!UBERON:0002365;1.57e-12;31!UBERON:0002330;1.57e-12;31!UBERON:0002368;3.69e-11;33!UBERON:0006915;2.28e-08;3!UBERON:0007616;2.28e-08;3!UBERON:0002217;2.28e-08;3!UBERON:0002018;2.28e-08;3!UBERON:0000949;3.20e-07;43!UBERON:0001136;4.68e-07;1!UBERON:0001343;4.68e-07;1!UBERON:0004910;4.68e-07;1!UBERON:0004813;4.68e-07;1!UBERON:0001282;5.72e-07;1!UBERON:0009842;5.72e-07;1!UBERON:0003704;5.72e-07;1!UBERON:0001171;5.72e-07;1!UBERON:0001172;5.72e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.84e-22,19;UBERON:0006925,1.84e-22,19;UBERON:0008836,1.84e-22,19;UBERON:0008835,3.47e-19,22;UBERON:0003894,3.47e-19,22;UBERON:0009854,2.77e-18,23;UBERON:0007499,1.07e-16,25;UBERON:0009497,1.07e-16,25;UBERON:0000015,1.07e-16,25;UBERON:0002423,1.07e-16,25;UBERON:0006235,1.07e-16,25;UBERON:0004161,1.07e-16,25;UBERON:0009856,5.38e-16,26;UBERON:0002365,3.65e-13,31;UBERON:0002330,3.65e-13,31;UBERON:0002368,1.75e-11,35;UBERON:0003914,9.09e-10,117;UBERON:0005256,2.33e-09,122;UBERON:0000949,1.37e-08,45;UBERON:0005172,1.61e-08,54;UBERON:0005173,1.61e-08,54;UBERON:0006915,2.64e-08,3;UBERON:0007616,2.64e-08,3;UBERON:0002217,2.64e-08,3;UBERON:0002018,2.64e-08,3;UBERON:0002417,1.73e-07,60;UBERON:0000916,1.73e-07,60;UBERON:0003104,3.07e-07,160;UBERON:0009142,3.07e-07,160;UBERON:0001136,4.69e-07,1;UBERON:0001343,4.69e-07,1;UBERON:0004910,4.69e-07,1;UBERON:0005154,4.69e-07,1;UBERON:0005295,4.69e-07,1;UBERON:0004813,4.69e-07,1;UBERON:0005297,4.69e-07,1;UBERON:0005294,4.69e-07,1;UBERON:0010141,4.69e-07,1;UBERON:0005891,4.69e-07,1;UBERON:0001282,5.89e-07,1;UBERON:0009842,5.89e-07,1;UBERON:0003704,5.89e-07,1;UBERON:0001171,5.89e-07,1;UBERON:0001172,5.89e-07,1;UBERON:0003929,6.58e-07,54;UBERON:0004645,9.25e-07,1;UBERON:0001256,9.25e-07,1;UBERON:0001259,9.25e-07,1|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,1.34465029290355,1.20538905604795,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22031028774085,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,1.05927344650575,0.286836620748814,0,0,0,0.74000264525148,0,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0.226864366320042,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0.220587945464788,0,0,0,0,0,0,0,0,0,8.87285243752816,6.87979051674338,3.54473944008842,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0,0,0.577465791044295,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22015127883421,0,2.99918973546171,0,0.502257091432126,2.10833939483032,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0.207970861530807,0,0,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.802025881213139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19427136107939,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr19:6718125..6718152,+ | |||
|id=chr19:6718125..6718152,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.08e-22;12!CL:0000214;2.28e-08;3!CL:0000511;4.68e-07;1!CL:0002625;4.68e-07;1!CL:0000216;4.68e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.47e-22,12;CL:0000214,2.64e-08,3;CL:0000511,4.69e-07,1;CL:0002625,4.69e-07,1;CL:0000216,4.69e-07,1;CL:1001319,9.25e-07,1;CL:1000600,9.25e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.15e-17;11!UBERON:0009497;7.32e-15;13!UBERON:0003104;6.29e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.30e-14!115;UBERON:0000477!1.56e-09!286;UBERON:0009854!2.10e-09!23;UBERON:0004111!2.40e-09!241;UBERON:0000483!3.34e-09!309;UBERON:0003929!4.90e-09!54;UBERON:0000025!6.61e-09!194;UBERON:0000119!6.87e-09!312;UBERON:0008835!1.30e-08!22;UBERON:0003894!1.30e-08!22;UBERON:0009497!4.02e-08!25;UBERON:0000015!4.02e-08!25;UBERON:0002423!4.02e-08!25;UBERON:0006235!4.02e-08!25;UBERON:0004161!4.02e-08!25;UBERON:0000481!5.74e-08!347;UBERON:0009856!8.66e-08!26;UBERON:0007499!4.44e-07!25;UBERON:0002107!7.12e-07!19;UBERON:0006925!7.12e-07!19;UBERON:0008836!7.12e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.76e-22;19!UBERON:0006925;1.76e-22;19!UBERON:0002423;1.03e-16;25!UBERON:0002365;1.57e-12;31!UBERON:0002330;1.57e-12;31!UBERON:0002368;3.69e-11;33!UBERON:0006915;2.28e-08;3!UBERON:0007616;2.28e-08;3!UBERON:0002217;2.28e-08;3!UBERON:0002018;2.28e-08;3!UBERON:0000949;3.20e-07;43!UBERON:0001136;4.68e-07;1!UBERON:0001343;4.68e-07;1!UBERON:0004910;4.68e-07;1!UBERON:0004813;4.68e-07;1!UBERON:0001282;5.72e-07;1!UBERON:0009842;5.72e-07;1!UBERON:0003704;5.72e-07;1!UBERON:0001171;5.72e-07;1!UBERON:0001172;5.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.84e-22,19;UBERON:0006925,1.84e-22,19;UBERON:0008836,1.84e-22,19;UBERON:0008835,3.47e-19,22;UBERON:0003894,3.47e-19,22;UBERON:0009854,2.77e-18,23;UBERON:0007499,1.07e-16,25;UBERON:0009497,1.07e-16,25;UBERON:0000015,1.07e-16,25;UBERON:0002423,1.07e-16,25;UBERON:0006235,1.07e-16,25;UBERON:0004161,1.07e-16,25;UBERON:0009856,5.38e-16,26;UBERON:0002365,3.65e-13,31;UBERON:0002330,3.65e-13,31;UBERON:0002368,1.75e-11,35;UBERON:0003914,9.09e-10,117;UBERON:0005256,2.33e-09,122;UBERON:0000949,1.37e-08,45;UBERON:0005172,1.61e-08,54;UBERON:0005173,1.61e-08,54;UBERON:0006915,2.64e-08,3;UBERON:0007616,2.64e-08,3;UBERON:0002217,2.64e-08,3;UBERON:0002018,2.64e-08,3;UBERON:0002417,1.73e-07,60;UBERON:0000916,1.73e-07,60;UBERON:0003104,3.07e-07,160;UBERON:0009142,3.07e-07,160;UBERON:0001136,4.69e-07,1;UBERON:0001343,4.69e-07,1;UBERON:0004910,4.69e-07,1;UBERON:0005154,4.69e-07,1;UBERON:0005295,4.69e-07,1;UBERON:0004813,4.69e-07,1;UBERON:0005297,4.69e-07,1;UBERON:0005294,4.69e-07,1;UBERON:0010141,4.69e-07,1;UBERON:0005891,4.69e-07,1;UBERON:0001282,5.89e-07,1;UBERON:0009842,5.89e-07,1;UBERON:0003704,5.89e-07,1;UBERON:0001171,5.89e-07,1;UBERON:0001172,5.89e-07,1;UBERON:0003929,6.58e-07,54;UBERON:0004645,9.25e-07,1;UBERON:0001256,9.25e-07,1;UBERON:0001259,9.25e-07,1 | |||
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|short_description=p@chr19:6718125..6718152,+ | |||
}} |
Revision as of 22:50, 11 September 2013
Short description: | p@chr19:6718125..6718152, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:6718125..6718152, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.47e-22 | 12 |
synovial cell | 2.64e-08 | 3 |
androgen binding protein secreting cell | 4.69e-07 | 1 |
seminiferous tubule epithelial cell | 4.69e-07 | 1 |
Sertoli cell | 4.69e-07 | 1 |
bladder cell | 9.25e-07 | 1 |
lower urinary tract cell | 9.25e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.