FFCP PHASE1:Hg19::chr1:10856639..10856662,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54897|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26002|TSSclassifier=S|UniProt=Q86V15|association_with_transcript=42bp_to_ENST00000377022_5end|coexpression_cluster_id=C3843|description=CAGE_peak_2_at_CASZ1_5end|id=chr1:10856639..10856662,-|ontology_enrichment_celltype=CL:0002076!4.60e-13!43;CL:0000066!1.64e-12!254;CL:0000223!5.37e-09!59;CL:0002251!2.57e-08!21|ontology_enrichment_celltype_v019=CL:0000240;1.91e-08;6!CL:0000311;1.91e-08;6!CL:0000079;1.91e-08;6!CL:0000237;1.91e-08;6!CL:0000622;1.24e-07;5!CL:0000312;1.34e-07;5!CL:0000362;4.26e-07;9!CL:0002159;8.09e-07;14!CL:0002251;8.66e-07;20|ontology_enrichment_celltype_v019_2=CL:0000240,2.40e-08,6;CL:0000311,2.40e-08,6;CL:0000079,2.40e-08,6;CL:0000237,2.40e-08,6;CL:0000036,2.40e-08,6;CL:0000357,2.40e-08,6;CL:0000114,2.40e-08,6;CL:0002076,3.05e-08,42;CL:0000622,8.57e-08,5;CL:0000312,1.47e-07,5;CL:0000362,3.87e-07,9;CL:0002159,7.83e-07,14;CL:0002251,9.08e-07,20|ontology_enrichment_development_v019=CL:0000357;1.91e-08;6!CL:0000114;1.91e-08;6|ontology_enrichment_disease=DOID:305!4.87e-13!106;DOID:0050687!9.61e-13!143;DOID:3119!5.83e-08!14;DOID:0050615!3.20e-07!16|ontology_enrichment_disease_v019=DOID:3119;8.36e-11;14|ontology_enrichment_disease_v019_2=DOID:3119,9.31e-11,14|ontology_enrichment_uberon=UBERON:0004119!3.75e-17!169;UBERON:0000925!3.75e-17!169;UBERON:0006595!3.75e-17!169;UBERON:0001007!1.21e-14!155;UBERON:0001555!1.21e-14!155;UBERON:0007026!1.21e-14!155;UBERON:0004921!2.74e-14!129;UBERON:0004185!2.74e-14!129;UBERON:0007023!9.05e-14!115;UBERON:0001004!8.72e-12!72;UBERON:0005153!8.25e-11!37;UBERON:0005157!3.21e-10!51;UBERON:0000077!4.06e-10!130;UBERON:0000468!5.86e-10!659;UBERON:0000161!6.29e-10!35;UBERON:0000922!9.44e-10!612;UBERON:0000481!2.20e-09!347;UBERON:0005181!4.20e-09!35;UBERON:0000924!1.56e-08!173;UBERON:0006601!1.56e-08!173;UBERON:0000062!1.72e-08!511;UBERON:0005178!2.17e-08!34;UBERON:0002224!2.17e-08!34;UBERON:0002050!3.63e-08!605;UBERON:0005423!3.63e-08!605;UBERON:0002048!4.69e-08!22;UBERON:0000117!4.69e-08!22;UBERON:0000171!4.69e-08!22;UBERON:0000170!4.69e-08!22;UBERON:0005597!4.69e-08!22;UBERON:0000118!4.69e-08!22;UBERON:0005911!6.79e-08!82;UBERON:0000923!6.97e-08!604;UBERON:0005291!6.97e-08!604;UBERON:0006598!6.97e-08!604;UBERON:0002532!6.97e-08!604;UBERON:0001041!8.07e-08!98;UBERON:0004121!1.45e-07!169;UBERON:0000475!1.52e-07!365;UBERON:0000166!1.54e-07!21;UBERON:0000464!1.65e-07!104;UBERON:0000915!3.45e-07!52;UBERON:0001044!4.10e-07!6;UBERON:0003293!4.10e-07!6;UBERON:0003294!4.10e-07!6;UBERON:0010047!4.10e-07!6;UBERON:0000167!4.10e-07!6;UBERON:0000065!6.48e-07!53;UBERON:0000467!9.73e-07!625|ontology_enrichment_uberon_v019=UBERON:0004921;1.06e-17;33!UBERON:0001041;1.07e-17;14!UBERON:0001044;2.17e-10;6!UBERON:0003293;2.17e-10;6!UBERON:0003294;2.17e-10;6!UBERON:0010047;2.17e-10;6!UBERON:0003408;2.17e-10;6!UBERON:0000167;2.17e-10;6!UBERON:0005409;5.26e-10;22!UBERON:0000945;2.54e-08;5!UBERON:0010039;2.54e-08;5!UBERON:0001555;2.77e-07;54|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.26e-15,160;UBERON:0000925,1.26e-15,160;UBERON:0006595,1.26e-15,160;UBERON:0004921,2.29e-14,118;UBERON:0001007,1.32e-12,145;UBERON:0001555,1.32e-12,145;UBERON:0007026,1.32e-12,145;UBERON:0007023,1.90e-11,114;UBERON:0001044,1.85e-10,6;UBERON:0003293,1.85e-10,6;UBERON:0003294,1.85e-10,6;UBERON:0010047,1.85e-10,6;UBERON:0000167,1.85e-10,6;UBERON:0001004,8.80e-10,74;UBERON:0001041,1.49e-09,87;UBERON:0005409,2.10e-08,25;UBERON:0000915,9.34e-08,52;UBERON:0005181,9.83e-08,35;UBERON:0005178,7.46e-07,34;UBERON:0002224,7.46e-07,34|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0.464448369948228,0,0.90361775633475,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23779651843358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.087834785693126,2.29213382120997,2.18577172975525,3.70784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,3.05265836499774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0,0,0.132529768321485,0.464775771478074,1.0366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.491953754172454,0,2.85350742062426,2.24803506515239,1.20634766893957,1.20364978706088,0,0,0,2.08674728955138,0,0,0,0,6.3216351836742,2.57545848628462,0,0,0,0,0.671928512795438,0.141775097242386,0.626909658919938,0.581267877027924,2.30029607499127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37257369524342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.601519410909855,3.40699659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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54897 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26002 | |||
|TSSclassifier=S | |||
|UniProt=Q86V15 | |||
|association_with_transcript=42bp_to_ENST00000377022_5end | |||
|coexpression_cluster_id=C3843 | |||
|description=CAGE_peak_2_at_CASZ1_5end | |||
|id=chr1:10856639..10856662,- | |||
|ontology_enrichment_celltype=CL:0002076!4.60e-13!43;CL:0000066!1.64e-12!254;CL:0000223!5.37e-09!59;CL:0002251!2.57e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0000240;1.91e-08;6!CL:0000311;1.91e-08;6!CL:0000079;1.91e-08;6!CL:0000237;1.91e-08;6!CL:0000622;1.24e-07;5!CL:0000312;1.34e-07;5!CL:0000362;4.26e-07;9!CL:0002159;8.09e-07;14!CL:0002251;8.66e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000240,2.40e-08,6;CL:0000311,2.40e-08,6;CL:0000079,2.40e-08,6;CL:0000237,2.40e-08,6;CL:0000036,2.40e-08,6;CL:0000357,2.40e-08,6;CL:0000114,2.40e-08,6;CL:0002076,3.05e-08,42;CL:0000622,8.57e-08,5;CL:0000312,1.47e-07,5;CL:0000362,3.87e-07,9;CL:0002159,7.83e-07,14;CL:0002251,9.08e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000357;1.91e-08;6!CL:0000114;1.91e-08;6 | |||
|ontology_enrichment_disease=DOID:305!4.87e-13!106;DOID:0050687!9.61e-13!143;DOID:3119!5.83e-08!14;DOID:0050615!3.20e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:3119;8.36e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,9.31e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.75e-17!169;UBERON:0000925!3.75e-17!169;UBERON:0006595!3.75e-17!169;UBERON:0001007!1.21e-14!155;UBERON:0001555!1.21e-14!155;UBERON:0007026!1.21e-14!155;UBERON:0004921!2.74e-14!129;UBERON:0004185!2.74e-14!129;UBERON:0007023!9.05e-14!115;UBERON:0001004!8.72e-12!72;UBERON:0005153!8.25e-11!37;UBERON:0005157!3.21e-10!51;UBERON:0000077!4.06e-10!130;UBERON:0000468!5.86e-10!659;UBERON:0000161!6.29e-10!35;UBERON:0000922!9.44e-10!612;UBERON:0000481!2.20e-09!347;UBERON:0005181!4.20e-09!35;UBERON:0000924!1.56e-08!173;UBERON:0006601!1.56e-08!173;UBERON:0000062!1.72e-08!511;UBERON:0005178!2.17e-08!34;UBERON:0002224!2.17e-08!34;UBERON:0002050!3.63e-08!605;UBERON:0005423!3.63e-08!605;UBERON:0002048!4.69e-08!22;UBERON:0000117!4.69e-08!22;UBERON:0000171!4.69e-08!22;UBERON:0000170!4.69e-08!22;UBERON:0005597!4.69e-08!22;UBERON:0000118!4.69e-08!22;UBERON:0005911!6.79e-08!82;UBERON:0000923!6.97e-08!604;UBERON:0005291!6.97e-08!604;UBERON:0006598!6.97e-08!604;UBERON:0002532!6.97e-08!604;UBERON:0001041!8.07e-08!98;UBERON:0004121!1.45e-07!169;UBERON:0000475!1.52e-07!365;UBERON:0000166!1.54e-07!21;UBERON:0000464!1.65e-07!104;UBERON:0000915!3.45e-07!52;UBERON:0001044!4.10e-07!6;UBERON:0003293!4.10e-07!6;UBERON:0003294!4.10e-07!6;UBERON:0010047!4.10e-07!6;UBERON:0000167!4.10e-07!6;UBERON:0000065!6.48e-07!53;UBERON:0000467!9.73e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.06e-17;33!UBERON:0001041;1.07e-17;14!UBERON:0001044;2.17e-10;6!UBERON:0003293;2.17e-10;6!UBERON:0003294;2.17e-10;6!UBERON:0010047;2.17e-10;6!UBERON:0003408;2.17e-10;6!UBERON:0000167;2.17e-10;6!UBERON:0005409;5.26e-10;22!UBERON:0000945;2.54e-08;5!UBERON:0010039;2.54e-08;5!UBERON:0001555;2.77e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.26e-15,160;UBERON:0000925,1.26e-15,160;UBERON:0006595,1.26e-15,160;UBERON:0004921,2.29e-14,118;UBERON:0001007,1.32e-12,145;UBERON:0001555,1.32e-12,145;UBERON:0007026,1.32e-12,145;UBERON:0007023,1.90e-11,114;UBERON:0001044,1.85e-10,6;UBERON:0003293,1.85e-10,6;UBERON:0003294,1.85e-10,6;UBERON:0010047,1.85e-10,6;UBERON:0000167,1.85e-10,6;UBERON:0001004,8.80e-10,74;UBERON:0001041,1.49e-09,87;UBERON:0005409,2.10e-08,25;UBERON:0000915,9.34e-08,52;UBERON:0005181,9.83e-08,35;UBERON:0005178,7.46e-07,34;UBERON:0002224,7.46e-07,34 | |||
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| |||
|short_description=p2@CASZ1 | |||
}} |
Revision as of 23:16, 11 September 2013
Short description: | p2@CASZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CASZ1_5end |
Coexpression cluster: | C3843_merkel_pineal_small_heart_maxillary_skeletal_salivary |
Association with transcript: | 42bp_to_ENST00000377022_5end |
EntrezGene: | CASZ1 |
HGNC: | 26002 |
UniProt: | Q86V15 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelial cell | 2.40e-08 | 6 |
keratin accumulating cell | 2.40e-08 | 6 |
stratified epithelial cell | 2.40e-08 | 6 |
keratinizing barrier epithelial cell | 2.40e-08 | 6 |
epithelial fate stem cell | 2.40e-08 | 6 |
stratified epithelial stem cell | 2.40e-08 | 6 |
surface ectodermal cell | 2.40e-08 | 6 |
endo-epithelial cell | 3.05e-08 | 42 |
acinar cell | 8.57e-08 | 5 |
keratinocyte | 1.47e-07 | 5 |
epidermal cell | 3.87e-07 | 9 |
general ecto-epithelial cell | 7.83e-07 | 14 |
epithelial cell of alimentary canal | 9.08e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.26e-15 | 160 |
endoderm | 1.26e-15 | 160 |
presumptive endoderm | 1.26e-15 | 160 |
subdivision of digestive tract | 2.29e-14 | 118 |
digestive system | 1.32e-12 | 145 |
digestive tract | 1.32e-12 | 145 |
primitive gut | 1.32e-12 | 145 |
adult organism | 1.90e-11 | 114 |
saliva-secreting gland | 1.85e-10 | 6 |
gland of oral region | 1.85e-10 | 6 |
gland of foregut | 1.85e-10 | 6 |
oral gland | 1.85e-10 | 6 |
oral cavity | 1.85e-10 | 6 |
respiratory system | 8.80e-10 | 74 |
foregut | 1.49e-09 | 87 |
gastrointestinal system | 2.10e-08 | 25 |
thoracic segment of trunk | 9.34e-08 | 52 |
thoracic segment organ | 9.83e-08 | 35 |
thoracic cavity element | 7.46e-07 | 34 |
thoracic cavity | 7.46e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 9.31e-11 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.