FFCP PHASE1:Hg19::chr1:156675368..156675382,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1382|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2339|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_uc001fpr.2_5end|description=CAGE_peak_1_at_CRABP2_5end|id=chr1:156675368..156675382,-|ontology_enrichment_celltype=CL:0000055!1.80e-18!180;CL:0000057!2.27e-16!75;CL:0002620!9.38e-08!23;CL:0000183!9.64e-07!59|ontology_enrichment_celltype_v019=CL:0002620;6.12e-08;23!CL:0000057;3.27e-07;73|ontology_enrichment_celltype_v019_2=CL:0000057,1.60e-16,76;CL:0002620,6.49e-08,23;CL:0000393,5.74e-07,61;CL:0000211,5.74e-07,61|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!1.56e-23!365;UBERON:0003102!1.44e-16!95;UBERON:0000468!5.31e-16!659;UBERON:0000481!6.60e-13!347;UBERON:0002100!1.25e-12!216;UBERON:0000467!3.42e-11!625;UBERON:0000480!6.22e-11!626;UBERON:0001444!1.45e-10!48;UBERON:0000922!1.85e-10!612;UBERON:0005256!3.99e-10!143;UBERON:0003104!4.06e-10!238;UBERON:0009142!4.06e-10!238;UBERON:0000486!9.36e-10!82;UBERON:0000062!1.92e-09!511;UBERON:0000064!6.01e-09!219;UBERON:0004923!6.87e-09!57;UBERON:0000119!8.31e-09!312;UBERON:0000483!8.81e-09!309;UBERON:0000914!1.65e-08!83;UBERON:0002329!1.65e-08!83;UBERON:0003077!1.65e-08!83;UBERON:0003059!1.65e-08!83;UBERON:0007282!1.65e-08!83;UBERON:0009618!1.65e-08!83;UBERON:0007285!1.65e-08!83;UBERON:0002050!1.82e-08!605;UBERON:0005423!1.82e-08!605;UBERON:0004119!2.19e-08!169;UBERON:0000925!2.19e-08!169;UBERON:0006595!2.19e-08!169;UBERON:0000923!3.42e-08!604;UBERON:0005291!3.42e-08!604;UBERON:0006598!3.42e-08!604;UBERON:0002532!3.42e-08!604;UBERON:0002199!5.62e-08!45;UBERON:0002416!5.62e-08!45;UBERON:0004121!3.33e-07!169;UBERON:0000915!4.04e-07!52;UBERON:0004290!7.75e-07!70|ontology_enrichment_uberon_v019=UBERON:0001444;1.77e-07;48!UBERON:0007811;2.04e-07;52!UBERON:0000033;2.38e-07;50!UBERON:0004923;4.36e-07;55|ontology_enrichment_uberon_v019_2=UBERON:0003102,9.36e-17,99;UBERON:0004923,3.47e-11,66;UBERON:0001444,1.71e-10,49;UBERON:0000486,2.55e-10,83;UBERON:0000033,3.55e-10,56;UBERON:0004119,3.96e-10,160;UBERON:0000925,3.96e-10,160;UBERON:0006595,3.96e-10,160;UBERON:0002100,5.56e-10,199;UBERON:0000153,1.40e-09,62;UBERON:0007811,1.40e-09,62;UBERON:0000922,5.70e-09,592;UBERON:0003104,1.48e-08,160;UBERON:0009142,1.48e-08,160;UBERON:0002199,5.03e-08,46;UBERON:0002416,5.03e-08,46;UBERON:0005423,6.56e-08,581;UBERON:0007524,1.22e-07,73;UBERON:0002329,2.72e-07,71;UBERON:0003059,2.72e-07,71;UBERON:0007282,2.72e-07,71;UBERON:0004290,2.72e-07,71;UBERON:0009618,2.72e-07,71;UBERON:0003077,2.84e-07,72;UBERON:0007285,2.84e-07,72;UBERON:0005256,2.88e-07,122;UBERON:0000161,3.08e-07,36;UBERON:0000165,5.56e-07,29;UBERON:0000930,5.56e-07,29;UBERON:0001007,6.48e-07,145;UBERON:0001555,6.48e-07,145;UBERON:0007026,6.48e-07,145;UBERON:0002050,7.12e-07,564;UBERON:0000915,8.15e-07,52;UBERON:0007503,9.48e-07,78|phase1_expression=15.2609838587268,5.56661362116556,16.6326196833246,12.0087958023756,4.02264984984559,28.7871712953122,32.9289841618804,96.6531406343051,65.8187783063593,26.7849990786645,129.093216074899,161.646615376327,431.259009403522,53.3432981257801,38.4420955844382,30.9269567367817,22.2996975368871,14.6062018077475,14.6379839637152,7.87974771691443,6.73202281106035,7.20945859399602,4.00730381983479,4.10623275218653,1.38096903554283,0,0,0.0787107813136792,0,0,12.3852898652861,48.7293248973831,81.928009907684,95.766288633198,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,4.87613732627923,73.1063937076963,24.9331995594884,13.0118094858444,1.00267582127178,2.89693037921647,0,10.705967146658,100.774115096896,51.6629496087774,29.6881575642766,11.0022423418079,291.800525922326,277.346763202753,37.3229502702886,38.6568016804373,70.6006770355174,0,0,0,0.198762407366705,9.46258054616737,0.694281003215189,0.56530794192401,0,0.550236083880135,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0.367663080345869,4.0507097394088,0.17859945656816,0.22452937262617,0.337834441449967,0,0,0.732806975721629,0,0,543.80928302174,105.358053759408,33.5570855911136,23.3040158231265,166.365240034312,186.200900654137,74.0094432187845,14.9448594021587,10.1133694851036,7.78027588499416,0.134710672069688,1.79808093424805,134.859468031634,204.5424531904,156.058073601309,307.789835754696,28.5235910772225,65.1596247205853,16.5582643087708,11.0073602170329,8.42704840213491,204.358325426148,51.9589162228779,162.324802227128,121.176291442769,86.2961583182163,19.1133886006986,5.03032699271367,56.7292704025203,23.7725187756732,75.0843752962136,32.9233215660628,48.1185839404461,46.7240363199516,3.62982986112067,35.6985375020835,159.740926836288,118.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1382 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2339 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001fpr.2_5end | |||
|description=CAGE_peak_1_at_CRABP2_5end | |||
|id=chr1:156675368..156675382,- | |||
|ontology_enrichment_celltype=CL:0000055!1.80e-18!180;CL:0000057!2.27e-16!75;CL:0002620!9.38e-08!23;CL:0000183!9.64e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.12e-08;23!CL:0000057;3.27e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.60e-16,76;CL:0002620,6.49e-08,23;CL:0000393,5.74e-07,61;CL:0000211,5.74e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.56e-23!365;UBERON:0003102!1.44e-16!95;UBERON:0000468!5.31e-16!659;UBERON:0000481!6.60e-13!347;UBERON:0002100!1.25e-12!216;UBERON:0000467!3.42e-11!625;UBERON:0000480!6.22e-11!626;UBERON:0001444!1.45e-10!48;UBERON:0000922!1.85e-10!612;UBERON:0005256!3.99e-10!143;UBERON:0003104!4.06e-10!238;UBERON:0009142!4.06e-10!238;UBERON:0000486!9.36e-10!82;UBERON:0000062!1.92e-09!511;UBERON:0000064!6.01e-09!219;UBERON:0004923!6.87e-09!57;UBERON:0000119!8.31e-09!312;UBERON:0000483!8.81e-09!309;UBERON:0000914!1.65e-08!83;UBERON:0002329!1.65e-08!83;UBERON:0003077!1.65e-08!83;UBERON:0003059!1.65e-08!83;UBERON:0007282!1.65e-08!83;UBERON:0009618!1.65e-08!83;UBERON:0007285!1.65e-08!83;UBERON:0002050!1.82e-08!605;UBERON:0005423!1.82e-08!605;UBERON:0004119!2.19e-08!169;UBERON:0000925!2.19e-08!169;UBERON:0006595!2.19e-08!169;UBERON:0000923!3.42e-08!604;UBERON:0005291!3.42e-08!604;UBERON:0006598!3.42e-08!604;UBERON:0002532!3.42e-08!604;UBERON:0002199!5.62e-08!45;UBERON:0002416!5.62e-08!45;UBERON:0004121!3.33e-07!169;UBERON:0000915!4.04e-07!52;UBERON:0004290!7.75e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001444;1.77e-07;48!UBERON:0007811;2.04e-07;52!UBERON:0000033;2.38e-07;50!UBERON:0004923;4.36e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,9.36e-17,99;UBERON:0004923,3.47e-11,66;UBERON:0001444,1.71e-10,49;UBERON:0000486,2.55e-10,83;UBERON:0000033,3.55e-10,56;UBERON:0004119,3.96e-10,160;UBERON:0000925,3.96e-10,160;UBERON:0006595,3.96e-10,160;UBERON:0002100,5.56e-10,199;UBERON:0000153,1.40e-09,62;UBERON:0007811,1.40e-09,62;UBERON:0000922,5.70e-09,592;UBERON:0003104,1.48e-08,160;UBERON:0009142,1.48e-08,160;UBERON:0002199,5.03e-08,46;UBERON:0002416,5.03e-08,46;UBERON:0005423,6.56e-08,581;UBERON:0007524,1.22e-07,73;UBERON:0002329,2.72e-07,71;UBERON:0003059,2.72e-07,71;UBERON:0007282,2.72e-07,71;UBERON:0004290,2.72e-07,71;UBERON:0009618,2.72e-07,71;UBERON:0003077,2.84e-07,72;UBERON:0007285,2.84e-07,72;UBERON:0005256,2.88e-07,122;UBERON:0000161,3.08e-07,36;UBERON:0000165,5.56e-07,29;UBERON:0000930,5.56e-07,29;UBERON:0001007,6.48e-07,145;UBERON:0001555,6.48e-07,145;UBERON:0007026,6.48e-07,145;UBERON:0002050,7.12e-07,564;UBERON:0000915,8.15e-07,52;UBERON:0007503,9.48e-07,78 | |||
|phase1_expression=15.2609838587268,5.56661362116556,16.6326196833246,12.0087958023756,4.02264984984559,28.7871712953122,32.9289841618804,96.6531406343051,65.8187783063593,26.7849990786645,129.093216074899,161.646615376327,431.259009403522,53.3432981257801,38.4420955844382,30.9269567367817,22.2996975368871,14.6062018077475,14.6379839637152,7.87974771691443,6.73202281106035,7.20945859399602,4.00730381983479,4.10623275218653,1.38096903554283,0,0,0.0787107813136792,0,0,12.3852898652861,48.7293248973831,81.928009907684,95.766288633198,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,4.87613732627923,73.1063937076963,24.9331995594884,13.0118094858444,1.00267582127178,2.89693037921647,0,10.705967146658,100.774115096896,51.6629496087774,29.6881575642766,11.0022423418079,291.800525922326,277.346763202753,37.3229502702886,38.6568016804373,70.6006770355174,0,0,0,0.198762407366705,9.46258054616737,0.694281003215189,0.56530794192401,0,0.550236083880135,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0.367663080345869,4.0507097394088,0.17859945656816,0.22452937262617,0.337834441449967,0,0,0.732806975721629,0,0,543.80928302174,105.358053759408,33.5570855911136,23.3040158231265,166.365240034312,186.200900654137,74.0094432187845,14.9448594021587,10.1133694851036,7.78027588499416,0.134710672069688,1.79808093424805,134.859468031634,204.5424531904,156.058073601309,307.789835754696,28.5235910772225,65.1596247205853,16.5582643087708,11.0073602170329,8.42704840213491,204.358325426148,51.9589162228779,162.324802227128,121.176291442769,86.2961583182163,19.1133886006986,5.03032699271367,56.7292704025203,23.7725187756732,75.0843752962136,32.9233215660628,48.1185839404461,46.7240363199516,3.62982986112067,35.6985375020835,159.740926836288,118.469932748195,51.9157596226016,145.20101369696,96.6152025171109,185.186272049932,72.7425991959857,122.380878482465,99.206473277937,184.375946980526,945.144494219593,30.1758153639122,20.7549322348939,68.3329187011265,30.3419539466376,79.6418672125237,12.0457930063382,270.171759077054,245.577660699712,287.580008602058,359.496538793305,317.419630401541,179.203883306233,158.014027653114,97.7726226053186,20.7202382028721,2.3218396401599,26.7095408217747,2.60274960087657,2.19160097101532,3.13314338848527,3.08823123650703,1.74303555273925,2.84724742933316,3.50561401216427,1.96221465125346,1.92373578473195,0.738155454624648,0,474.544835065104,317.538816592771,0,0,0,0,43.9068725598915,21.6175440976142,60.8016581163786,28.1004383144049,2.21163739305588,125.457343189808,58.9713032611688,46.797065337581,1.44331342025273,28.634810028844,2.93521735589554,0.144366447761074,0,0,301.858080020443,318.498366137198,28.8073897122255,536.805784229411,278.683429291365,7.49870671894216,2.01578553838631,27.2208186705382,5.3735113621709,6.68458058582112,9.58456697913028,0,0,5.1832028885193,3.02651902175619,3.91351543621778,1.0159663086747,0,0,8.55362230113526,3.29047976650635,0,0,2.80327710863402,72.8053314951578,1.39342743059805,2.84397774667111,278.972027764468,11.834238535784,18.3497300443561,12.4808924293639,15.4324424557285,1.41849132023278,7.45982101245078,50.9001657423005,123.717726029249,13.1718453884923,13.6809197403369,50.8210486701841,2.37585561880029,4.22015127883421,1.74306691720059,2.0994328148232,153.2459636079,9.5428847372104,153.908775822613,0.239624855491583,2.29723871668228,2.85273810081437,2.02693829334611,1.2328579353023,1.96967059563885,0,0,0,0,2.7950408664471,3.90419561572865,4.63973287666617,1.67516265334349,5.10351001322531,0,0,0,11.6556917133183,27.5093786582822,10.8506009479894,13.5181059995025,41.5739543897387,22.0783381047509,38.6566669475954,63.198680942821,2.27407504055985,38.2850363782268,41.8462127077325,80.0162191470992,718.788142494449,563.319930020305,256.67128101052,0,0.215714200818617,0,200.367324725977,2441.60789761899,923.499955828844,40.6896804822794,3.83654933220156,23.5754479323782,31.9066481646695,15.8629247210678,26.0583352252644,93.5033818603443,66.1559586413392,130.685429830462,165.239837899784,76.8496555191759,139.917295665791,88.5899765506591,36.0911646545913,66.9428789563966,23.651776321909,12.0180170884433,17.9640448494411,54.1439535488894,22.3344477602803,23.5304930753057,20.4594914514565,33.8820728746131,1.13733384070897,0.170093705276516,0.647747748306418,3.08454505380579,16.2567862526312,42.6436307776625,7.13653564526107,9.97291210714469,9.85048920777585,0,0,313.638503017344,102.668584104008,15.6181629438865,5.66725564062472,1.64825036673018,2.0627374980147,52.8324294956479,72.8067475560904,1.6068392984416,91.7405116592238,67.0111484448703,72.1467271212809,7.02966519671106,176.70630280831,69.6080130788297,42.6985403354666,196.315638601056,94.5429715864795,12.4923543787319,12.6336585369638,92.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| |||
|short_description=p1@CRABP2 | |||
}} |
Revision as of 00:56, 12 September 2013
Short description: | p1@CRABP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CRABP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001fpr.2_5end |
EntrezGene: | CRABP2 |
HGNC: | 2339 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.60e-16 | 76 |
skin fibroblast | 6.49e-08 | 23 |
electrically responsive cell | 5.74e-07 | 61 |
electrically active cell | 5.74e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
surface structure | 9.36e-17 | 99 |
organ component layer | 3.47e-11 | 66 |
subdivision of head | 1.71e-10 | 49 |
multilaminar epithelium | 2.55e-10 | 83 |
head | 3.55e-10 | 56 |
endoderm-derived structure | 3.96e-10 | 160 |
endoderm | 3.96e-10 | 160 |
presumptive endoderm | 3.96e-10 | 160 |
trunk | 5.56e-10 | 199 |
anterior region of body | 1.40e-09 | 62 |
craniocervical region | 1.40e-09 | 62 |
embryo | 5.70e-09 | 592 |
mesenchyme | 1.48e-08 | 160 |
entire embryonic mesenchyme | 1.48e-08 | 160 |
integument | 5.03e-08 | 46 |
integumental system | 5.03e-08 | 46 |
developing anatomical structure | 6.56e-08 | 581 |
dense mesenchyme tissue | 1.22e-07 | 73 |
somite | 2.72e-07 | 71 |
presomitic mesoderm | 2.72e-07 | 71 |
presumptive segmental plate | 2.72e-07 | 71 |
dermomyotome | 2.72e-07 | 71 |
trunk paraxial mesoderm | 2.72e-07 | 71 |
paraxial mesoderm | 2.84e-07 | 72 |
presumptive paraxial mesoderm | 2.84e-07 | 72 |
trunk mesenchyme | 2.88e-07 | 122 |
orifice | 3.08e-07 | 36 |
mouth | 5.56e-07 | 29 |
stomodeum | 5.56e-07 | 29 |
digestive system | 6.48e-07 | 145 |
digestive tract | 6.48e-07 | 145 |
primitive gut | 6.48e-07 | 145 |
embryonic structure | 7.12e-07 | 564 |
thoracic segment of trunk | 8.15e-07 | 52 |
epithelial vesicle | 9.48e-07 | 78 |
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