FFCP PHASE1:Hg19::chr1:167906020..167906058,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25874|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24515|TSSclassifier=S|UniProt=Q5R3B4|association_with_transcript=0bp_to_ENST00000458574_5end|coexpression_cluster_id=C1|description=CAGE_peak_7_at_BRP44_5end|id=chr1:167906020..167906058,-|ontology_enrichment_celltype=CL:0000037!1.42e-09!172;CL:0000566!1.42e-09!172;CL:0000988!2.03e-09!182;CL:0002032!8.64e-09!165;CL:0000837!8.64e-09!165;CL:0000094!2.91e-07!8;CL:0000738!8.40e-07!140|ontology_enrichment_celltype_v019=CL:0000540;4.24e-14;6!CL:0000404;4.24e-14;6!CL:0000771;3.52e-11;2!CL:0000094;6.77e-11;8!CL:0000081;3.56e-08;11!CL:0000775;5.54e-08;3|ontology_enrichment_celltype_v019_2=CL:0000540,4.84e-14,6;CL:0000031,4.84e-14,6;CL:0000404,4.84e-14,6;CL:0000771,2.73e-11,2;CL:0000094,5.98e-11,8;CL:0000047,8.90e-11,8;CL:0000081,3.25e-08,11;CL:0000775,5.54e-08,3|ontology_enrichment_development_v019=CL:0000031;4.24e-14;6!UBERON:0007297;3.52e-11;2!UBERON:0009117;4.75e-09;10!UBERON:0005564;4.75e-09;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001301;5.71e-21;1!UBERON:0003135;4.98e-17;11!UBERON:0000473;4.43e-11;8!UBERON:0003101;7.71e-09;22!UBERON:0000079;7.71e-09;22!UBERON:0006947;7.02e-08;3!UBERON:0004054;7.02e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0001301,6.31e-21,1;UBERON:0003135,5.12e-17,11;UBERON:0000473,4.43e-11,8;UBERON:0003101,7.82e-09,22;UBERON:0000079,7.82e-09,22;UBERON:0006947,7.26e-08,3;UBERON:0004054,7.26e-08,3|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0.22465726229299,0,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.411202997999018,0.167186495390678,0,0,0,0,0,0.443067789167242,0,0,0.130059347559878,0,0,0,0.296573126324121,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,15.5865099842278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,1.31780417436063,0,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0,0.500170521059677,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.142283686696828,0.159426272728822,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0.201799707191048,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0.140669416410513,0,0.494411622680279,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0.874813840149763,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0.139423744278603,0,0,0,0,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0.335643173951685,0.189753732724185,0.158936578980379,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0.802577647298789,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,1.22308667769421,0,0,0.146178634172371,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0.114536596165916,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0.803765742325096,1.10031549277787,1.24632101408756,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0.512483037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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25874 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24515 | |||
|TSSclassifier=S | |||
|UniProt=Q5R3B4 | |||
|association_with_transcript=0bp_to_ENST00000458574_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_7_at_BRP44_5end | |||
|id=chr1:167906020..167906058,- | |||
|ontology_enrichment_celltype=CL:0000037!1.42e-09!172;CL:0000566!1.42e-09!172;CL:0000988!2.03e-09!182;CL:0002032!8.64e-09!165;CL:0000837!8.64e-09!165;CL:0000094!2.91e-07!8;CL:0000738!8.40e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000540;4.24e-14;6!CL:0000404;4.24e-14;6!CL:0000771;3.52e-11;2!CL:0000094;6.77e-11;8!CL:0000081;3.56e-08;11!CL:0000775;5.54e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.84e-14,6;CL:0000031,4.84e-14,6;CL:0000404,4.84e-14,6;CL:0000771,2.73e-11,2;CL:0000094,5.98e-11,8;CL:0000047,8.90e-11,8;CL:0000081,3.25e-08,11;CL:0000775,5.54e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000031;4.24e-14;6!UBERON:0007297;3.52e-11;2!UBERON:0009117;4.75e-09;10!UBERON:0005564;4.75e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;5.71e-21;1!UBERON:0003135;4.98e-17;11!UBERON:0000473;4.43e-11;8!UBERON:0003101;7.71e-09;22!UBERON:0000079;7.71e-09;22!UBERON:0006947;7.02e-08;3!UBERON:0004054;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,6.31e-21,1;UBERON:0003135,5.12e-17,11;UBERON:0000473,4.43e-11,8;UBERON:0003101,7.82e-09,22;UBERON:0000079,7.82e-09,22;UBERON:0006947,7.26e-08,3;UBERON:0004054,7.26e-08,3 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0.22465726229299,0,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.411202997999018,0.167186495390678,0,0,0,0,0,0.443067789167242,0,0,0.130059347559878,0,0,0,0.296573126324121,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,15.5865099842278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,1.31780417436063,0,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0,0.500170521059677,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.142283686696828,0.159426272728822,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0.201799707191048,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0.140669416410513,0,0.494411622680279,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0.874813840149763,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0.139423744278603,0,0,0,0,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0.335643173951685,0.189753732724185,0.158936578980379,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0.802577647298789,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,1.22308667769421,0,0,0.146178634172371,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0.114536596165916,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0.803765742325096,1.10031549277787,1.24632101408756,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0.512483037175893,0,0,0,0,0,0.163565394255844,0,0,0,0.39997479170986,0.106691729694141,0,0,0.184105950251841,0,0,0.255788742607303,0,0,0.327628914576042,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0,0.345701962667338,0,0,0,0.354581522651905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.397901550322736,0.237840181555137,0.11294608203896,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0.253397002022874,0,0,0,0,32.7363976302794,84.14073686904,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@BRP44 | |||
}} |
Revision as of 01:36, 12 September 2013
Short description: | p7@BRP44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_BRP44_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000458574_5end |
EntrezGene: | BRP44 |
HGNC: | 24515 |
UniProt: | Q5R3B4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.84e-14 | 6 |
neuroblast | 4.84e-14 | 6 |
electrically signaling cell | 4.84e-14 | 6 |
eosinophil | 2.73e-11 | 2 |
granulocyte | 5.98e-11 | 8 |
neuronal stem cell | 8.90e-11 | 8 |
blood cell | 3.25e-08 | 11 |
neutrophil | 5.54e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epididymis | 6.31e-21 | 1 |
male reproductive organ | 5.12e-17 | 11 |
testis | 4.43e-11 | 8 |
male organism | 7.82e-09 | 22 |
male reproductive system | 7.82e-09 | 22 |
male genital duct | 7.26e-08 | 3 |
internal male genitalia | 7.26e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.