FFCP PHASE1:Hg19::chr1:24239844..24239858,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1269|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2160|TSSclassifier=S|UniProt=P34972|association_with_transcript=0bp_to_ENST00000374472_5end|coexpression_cluster_id=C47|description=CAGE_peak_1_at_CNR2_5end|id=chr1:24239844..24239858,-|ontology_enrichment_celltype=CL:0000037!2.34e-51!172;CL:0000566!2.34e-51!172;CL:0000988!1.61e-46!182;CL:0002032!2.47e-45!165;CL:0000837!2.47e-45!165;CL:0000738!1.27e-38!140;CL:0000542!7.29e-33!53;CL:0000051!7.29e-33!53;CL:0000838!9.40e-32!52;CL:0002087!3.01e-28!119;CL:0002031!2.67e-27!124;CL:0000945!4.92e-25!24;CL:0000826!4.92e-25!24;CL:0000236!5.98e-18!14;CL:0000763!4.99e-16!112;CL:0000049!4.99e-16!112;CL:0000625!3.13e-11!11;CL:0000134!4.60e-09!358;CL:0000094!1.41e-08!8;CL:0002320!2.22e-08!365;CL:0000791!4.00e-08!18;CL:0000789!4.00e-08!18;CL:0002420!4.00e-08!18;CL:0002419!4.00e-08!18;CL:0000790!4.00e-08!18;CL:0000084!6.49e-08!25;CL:0000827!6.49e-08!25;CL:0000766!1.48e-07!76|ontology_enrichment_celltype_v019=CL:0000945;1.01e-35;24!CL:0000542;6.86e-27;53!CL:0000236;2.57e-25;13!CL:0000625;1.72e-16;11!CL:0002087;5.28e-12;104!CL:0000791;3.54e-11;18!CL:0000789;3.54e-11;18!CL:0002419;3.54e-11;18!CL:0000084;2.10e-10;25!CL:0000094;5.02e-10;8!CL:0000738;1.17e-08;136!CL:0000988;5.17e-08;177!CL:0000081;5.71e-07;11|ontology_enrichment_celltype_v019_2=CL:0000037,5.04e-51,168;CL:0000988,2.78e-47,177;CL:0000542,1.16e-46,53;CL:0000051,1.16e-46,53;CL:0000838,5.68e-45,52;CL:0002032,2.28e-44,161;CL:0000837,2.28e-44,161;CL:0000738,1.63e-43,136;CL:0002087,9.12e-36,115;CL:0000945,1.47e-35,24;CL:0000826,1.47e-35,24;CL:0002031,1.98e-31,120;CL:0000236,7.52e-27,14;CL:0000625,1.81e-16,11;CL:0000134,8.25e-13,354;CL:0002320,3.60e-12,361;CL:0000791,3.66e-11,18;CL:0000789,3.66e-11,18;CL:0002420,3.66e-11,18;CL:0002419,3.66e-11,18;CL:0000790,3.66e-11,18;CL:0000084,2.17e-10,25;CL:0000827,2.17e-10,25;CL:0000094,5.00e-10,8;CL:0000219,6.02e-10,386;CL:0000763,6.52e-10,108;CL:0000049,6.52e-10,108;CL:0000034,2.40e-07,441;CL:0000048,2.57e-07,427;CL:0000081,5.69e-07,11;CL:0000723,5.78e-07,433|ontology_enrichment_development_v019=CL:0000051;6.86e-27;53!CL:0000790;3.54e-11;18|ontology_enrichment_disease=DOID:2531!1.56e-13!51;DOID:0060083!1.56e-13!51;DOID:1240!1.06e-10!39;DOID:8692!1.59e-07!31|ontology_enrichment_disease_v019=DOID:2531;1.33e-07;51!DOID:0060083;1.33e-07;51|ontology_enrichment_disease_v019_2=DOID:2531,3.67e-11,51;DOID:0060083,3.67e-11,51;DOID:1240,1.37e-07,39|ontology_enrichment_uberon=UBERON:0002390!3.40e-11!102;UBERON:0003061!3.40e-11!102;UBERON:0000178!7.45e-11!15;UBERON:0000179!7.45e-11!15;UBERON:0000463!7.45e-11!15;UBERON:0002193!1.51e-10!112;UBERON:0007023!4.43e-09!115;UBERON:0002384!9.08e-08!375|ontology_enrichment_uberon_v019=UBERON:0000178;1.16e-16;15!UBERON:0000179;1.16e-16;15!UBERON:0000463;1.16e-16;15!UBERON:0002390;8.44e-14;32!UBERON:0004177;1.16e-09;5!UBERON:0005057;1.16e-09;5!UBERON:0002193;1.94e-09;42!UBERON:0002106;7.34e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.16e-16,15;UBERON:0000179,1.16e-16,15;UBERON:0000463,1.16e-16,15;UBERON:0002390,1.90e-11,98;UBERON:0003061,1.90e-11,98;UBERON:0002193,1.99e-11,108;UBERON:0002384,2.65e-11,371;UBERON:0004177,1.17e-09,7;UBERON:0005057,1.17e-09,7;UBERON:0002106,7.43e-07,3;UBERON:0004854,7.43e-07,3;UBERON:0009034,7.43e-07,3;UBERON:0002095,7.43e-07,3;UBERON:0004782,7.43e-07,3;UBERON:0003281,7.43e-07,3;UBERON:0009664,7.43e-07,3;UBERON:0002296,7.43e-07,3;UBERON:0005602,7.43e-07,3;UBERON:0001179,7.43e-07,3;UBERON:0006293,7.43e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11969818511273,4.35133124084712,2.59745578335141,7.47392126012918,0.383829398097213,1.54816123316076,0,0,0,12.6271536945892,8.38798471675787,0.293600439334847,0,0,0.651032612147555,0,1.6194683300949,0.257575567634187,0.145398238779565,1.88937971844405,3.15359279544161,0,1.6446715520873,0,0.28769239232215,2.81776777182011,1.6553756092201,0,2.5819387343353,0,0,0.818718450173537,0.898893937780338,0,0.320929027076094,1.27867425159808,0.659702600373432,9.57425556583833,9.80316926225197,0,0,0.622822248995575,0,3.12889751052121,1.08594422352558,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,49.2789484491704,61.1675244613587,81.834851355447,81.9322027327694,61.6609820035459,70.6945501144014,49.5783654588647,64.8756553084048,111.565741945452,69.8812255351417,117.74015426257,3.96513985737078,1.68152568894461,0.263384084775077,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0,0.657751618414705,1.93445012450094,1.73881851441031,0.296573126324121,0.802622484269139,0,0,0,0,0,2.54852331459277,3.25541726928209,2.85135613334512,1.05402583354441,2.17577238962511,6.24653632761729,1.89421801635213,4.10563998460523,2.62088766192152,1.60464117470104,2.17236605824198,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0.398873881556595,2.14641561874808,4.57595928624102,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1269 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2160 | |||
|TSSclassifier=S | |||
|UniProt=P34972 | |||
|association_with_transcript=0bp_to_ENST00000374472_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_CNR2_5end | |||
|id=chr1:24239844..24239858,- | |||
|ontology_enrichment_celltype=CL:0000037!2.34e-51!172;CL:0000566!2.34e-51!172;CL:0000988!1.61e-46!182;CL:0002032!2.47e-45!165;CL:0000837!2.47e-45!165;CL:0000738!1.27e-38!140;CL:0000542!7.29e-33!53;CL:0000051!7.29e-33!53;CL:0000838!9.40e-32!52;CL:0002087!3.01e-28!119;CL:0002031!2.67e-27!124;CL:0000945!4.92e-25!24;CL:0000826!4.92e-25!24;CL:0000236!5.98e-18!14;CL:0000763!4.99e-16!112;CL:0000049!4.99e-16!112;CL:0000625!3.13e-11!11;CL:0000134!4.60e-09!358;CL:0000094!1.41e-08!8;CL:0002320!2.22e-08!365;CL:0000791!4.00e-08!18;CL:0000789!4.00e-08!18;CL:0002420!4.00e-08!18;CL:0002419!4.00e-08!18;CL:0000790!4.00e-08!18;CL:0000084!6.49e-08!25;CL:0000827!6.49e-08!25;CL:0000766!1.48e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.01e-35;24!CL:0000542;6.86e-27;53!CL:0000236;2.57e-25;13!CL:0000625;1.72e-16;11!CL:0002087;5.28e-12;104!CL:0000791;3.54e-11;18!CL:0000789;3.54e-11;18!CL:0002419;3.54e-11;18!CL:0000084;2.10e-10;25!CL:0000094;5.02e-10;8!CL:0000738;1.17e-08;136!CL:0000988;5.17e-08;177!CL:0000081;5.71e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.04e-51,168;CL:0000988,2.78e-47,177;CL:0000542,1.16e-46,53;CL:0000051,1.16e-46,53;CL:0000838,5.68e-45,52;CL:0002032,2.28e-44,161;CL:0000837,2.28e-44,161;CL:0000738,1.63e-43,136;CL:0002087,9.12e-36,115;CL:0000945,1.47e-35,24;CL:0000826,1.47e-35,24;CL:0002031,1.98e-31,120;CL:0000236,7.52e-27,14;CL:0000625,1.81e-16,11;CL:0000134,8.25e-13,354;CL:0002320,3.60e-12,361;CL:0000791,3.66e-11,18;CL:0000789,3.66e-11,18;CL:0002420,3.66e-11,18;CL:0002419,3.66e-11,18;CL:0000790,3.66e-11,18;CL:0000084,2.17e-10,25;CL:0000827,2.17e-10,25;CL:0000094,5.00e-10,8;CL:0000219,6.02e-10,386;CL:0000763,6.52e-10,108;CL:0000049,6.52e-10,108;CL:0000034,2.40e-07,441;CL:0000048,2.57e-07,427;CL:0000081,5.69e-07,11;CL:0000723,5.78e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000051;6.86e-27;53!CL:0000790;3.54e-11;18 | |||
|ontology_enrichment_disease=DOID:2531!1.56e-13!51;DOID:0060083!1.56e-13!51;DOID:1240!1.06e-10!39;DOID:8692!1.59e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;1.33e-07;51!DOID:0060083;1.33e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.67e-11,51;DOID:0060083,3.67e-11,51;DOID:1240,1.37e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.40e-11!102;UBERON:0003061!3.40e-11!102;UBERON:0000178!7.45e-11!15;UBERON:0000179!7.45e-11!15;UBERON:0000463!7.45e-11!15;UBERON:0002193!1.51e-10!112;UBERON:0007023!4.43e-09!115;UBERON:0002384!9.08e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.16e-16;15!UBERON:0000179;1.16e-16;15!UBERON:0000463;1.16e-16;15!UBERON:0002390;8.44e-14;32!UBERON:0004177;1.16e-09;5!UBERON:0005057;1.16e-09;5!UBERON:0002193;1.94e-09;42!UBERON:0002106;7.34e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.16e-16,15;UBERON:0000179,1.16e-16,15;UBERON:0000463,1.16e-16,15;UBERON:0002390,1.90e-11,98;UBERON:0003061,1.90e-11,98;UBERON:0002193,1.99e-11,108;UBERON:0002384,2.65e-11,371;UBERON:0004177,1.17e-09,7;UBERON:0005057,1.17e-09,7;UBERON:0002106,7.43e-07,3;UBERON:0004854,7.43e-07,3;UBERON:0009034,7.43e-07,3;UBERON:0002095,7.43e-07,3;UBERON:0004782,7.43e-07,3;UBERON:0003281,7.43e-07,3;UBERON:0009664,7.43e-07,3;UBERON:0002296,7.43e-07,3;UBERON:0005602,7.43e-07,3;UBERON:0001179,7.43e-07,3;UBERON:0006293,7.43e-07,3 | |||
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|short_description=p1@CNR2 | |||
}} |
Revision as of 04:35, 12 September 2013
Short description: | p1@CNR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CNR2_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000374472_5end |
EntrezGene: | CNR2 |
HGNC: | 2160 |
UniProt: | P34972 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.04e-51 | 168 |
hematopoietic cell | 2.78e-47 | 177 |
lymphocyte | 1.16e-46 | 53 |
common lymphoid progenitor | 1.16e-46 | 53 |
lymphoid lineage restricted progenitor cell | 5.68e-45 | 52 |
hematopoietic oligopotent progenitor cell | 2.28e-44 | 161 |
hematopoietic multipotent progenitor cell | 2.28e-44 | 161 |
leukocyte | 1.63e-43 | 136 |
nongranular leukocyte | 9.12e-36 | 115 |
lymphocyte of B lineage | 1.47e-35 | 24 |
pro-B cell | 1.47e-35 | 24 |
hematopoietic lineage restricted progenitor cell | 1.98e-31 | 120 |
B cell | 7.52e-27 | 14 |
CD8-positive, alpha-beta T cell | 1.81e-16 | 11 |
mesenchymal cell | 8.25e-13 | 354 |
connective tissue cell | 3.60e-12 | 361 |
mature alpha-beta T cell | 3.66e-11 | 18 |
alpha-beta T cell | 3.66e-11 | 18 |
immature T cell | 3.66e-11 | 18 |
mature T cell | 3.66e-11 | 18 |
immature alpha-beta T cell | 3.66e-11 | 18 |
T cell | 2.17e-10 | 25 |
pro-T cell | 2.17e-10 | 25 |
granulocyte | 5.00e-10 | 8 |
motile cell | 6.02e-10 | 386 |
myeloid cell | 6.52e-10 | 108 |
common myeloid progenitor | 6.52e-10 | 108 |
stem cell | 2.40e-07 | 441 |
multi fate stem cell | 2.57e-07 | 427 |
blood cell | 5.69e-07 | 11 |
somatic stem cell | 5.78e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
blood | 1.16e-16 | 15 |
haemolymphatic fluid | 1.16e-16 | 15 |
organism substance | 1.16e-16 | 15 |
hematopoietic system | 1.90e-11 | 98 |
blood island | 1.90e-11 | 98 |
hemolymphoid system | 1.99e-11 | 108 |
connective tissue | 2.65e-11 | 371 |
hemopoietic organ | 1.17e-09 | 7 |
immune organ | 1.17e-09 | 7 |
spleen | 7.43e-07 | 3 |
gastrointestinal system mesentery | 7.43e-07 | 3 |
stomach region | 7.43e-07 | 3 |
mesentery | 7.43e-07 | 3 |
gastrointestinal system serosa | 7.43e-07 | 3 |
mesentery of stomach | 7.43e-07 | 3 |
gut mesentery | 7.43e-07 | 3 |
dorsal mesentery | 7.43e-07 | 3 |
dorsal mesogastrium | 7.43e-07 | 3 |
peritoneal cavity | 7.43e-07 | 3 |
spleen primordium | 7.43e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.67e-11 | 51 |
immune system cancer | 3.67e-11 | 51 |
leukemia | 1.37e-07 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.