FFCP PHASE1:Hg19::chr1:93004036..93004045,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:93004036..93004045,+|id=chr1:93004036..93004045,+|ontology_enrichment_celltype=CL:0000542!1.26e-16!53;CL:0000051!1.26e-16!53;CL:0000988!9.87e-16!182;CL:0000838!2.58e-15!52;CL:0000945!4.61e-15!24;CL:0000826!4.61e-15!24;CL:0000037!3.00e-14!172;CL:0000566!3.00e-14!172;CL:0002032!1.94e-13!165;CL:0000837!1.94e-13!165;CL:0000817!1.71e-08!3;CL:0000080!8.76e-07!6|ontology_enrichment_celltype_v019=CL:0000945;1.04e-25;24!CL:0000946;8.61e-12;1!CL:0000786;8.61e-12;1!CL:0000817;2.81e-11;1!CL:1001319;2.81e-11;1!CL:1000600;2.81e-11;1!CL:0000542;3.35e-07;53|ontology_enrichment_celltype_v019_2=CL:0000945,8.46e-26,24;CL:0000826,8.46e-26,24;CL:0000817,1.23e-14,3;CL:0000838,1.87e-14,52;CL:0000542,3.69e-14,53;CL:0000051,3.69e-14,53;CL:0000988,9.09e-14,177;CL:0000946,8.62e-12,1;CL:0000786,8.62e-12,1;CL:0000980,8.62e-12,1;CL:0002032,1.33e-11,161;CL:0000837,1.33e-11,161;CL:1001319,2.68e-11,1;CL:1000600,2.68e-11,1;CL:0000037,5.04e-11,168|ontology_enrichment_development_v019=CL:0000051;3.35e-07;53|ontology_enrichment_disease=DOID:2531!5.78e-35!51;DOID:0060083!5.78e-35!51;DOID:162!6.07e-23!235;DOID:14566!3.95e-22!239;DOID:1240!5.96e-22!39;DOID:0050686!1.76e-18!137;DOID:0060058!9.82e-15!10;DOID:8692!3.71e-12!31|ontology_enrichment_disease_v019=DOID:2355;1.12e-11;1!DOID:9119;2.81e-11;1!DOID:1240;2.41e-09;39!DOID:2531;6.09e-09;51!DOID:0060083;6.09e-09;51!DOID:8692;5.74e-08;31|ontology_enrichment_disease_v019_2=DOID:2531,9.73e-15,51;DOID:0060083,9.73e-15,51;DOID:1240,7.30e-12,39;DOID:2355,1.18e-11,1;DOID:9119,3.28e-11,1;DOID:8692,6.31e-08,31|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004645;2.81e-11;1!UBERON:0001256;2.81e-11;1!UBERON:0001259;2.81e-11;1|ontology_enrichment_uberon_v019_2=UBERON:0004645,2.68e-11,1;UBERON:0001256,2.68e-11,1;UBERON:0001259,2.68e-11,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06978768047132,1.39571002064908,1.25937250101887,0,0,0,0,0,0,0.309868802321207,1.84820002233648,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0.743212700502875,1.44269212976445,0.0711418433484141,0.318852545457645,0.399158742865633,0,0,0,0,0,0.47003968731907,0,0.169291777801603,0,0,0.425846237690326,0.343505344755765,0,0,0,0.19538809540204,0,1.23087398947712,0,1.33228787199128,1.4098700508785,0,0,0,0.222886768554957,0.284136146806413,0,0,0,0,0,0,0.824019371133798,0,0,0,0,0,1.6001024709939,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.470940769185074,0.831058409500782,0,0,0,0.75901493089674,1.27149263184303,0,0.163232808159148,0,0,0,0,0,2.6686901581256,1.35920332841153,0.313265848516366,0,0,0,0.364909578431332,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.274083849293502,0.19871461170299,0,0,0,0,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0.209205692624666,0,0,0,0,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11683330164461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,4.4329961204643,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758245587708239,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0.168942440653073,0.512483037175893,0,0,0,0.389720617678777,0,1.63565394255844,0,0,0.422624246717254,0.59996218756479,0.106691729694141,0.688859918643263,0,0,0,0,0,0.107824811396682,1.10086159299127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0,0,0,0,0,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.79880526579098,0.171488009437418,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:93004036..93004045,+ | |||
|id=chr1:93004036..93004045,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.26e-16!53;CL:0000051!1.26e-16!53;CL:0000988!9.87e-16!182;CL:0000838!2.58e-15!52;CL:0000945!4.61e-15!24;CL:0000826!4.61e-15!24;CL:0000037!3.00e-14!172;CL:0000566!3.00e-14!172;CL:0002032!1.94e-13!165;CL:0000837!1.94e-13!165;CL:0000817!1.71e-08!3;CL:0000080!8.76e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.04e-25;24!CL:0000946;8.61e-12;1!CL:0000786;8.61e-12;1!CL:0000817;2.81e-11;1!CL:1001319;2.81e-11;1!CL:1000600;2.81e-11;1!CL:0000542;3.35e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.46e-26,24;CL:0000826,8.46e-26,24;CL:0000817,1.23e-14,3;CL:0000838,1.87e-14,52;CL:0000542,3.69e-14,53;CL:0000051,3.69e-14,53;CL:0000988,9.09e-14,177;CL:0000946,8.62e-12,1;CL:0000786,8.62e-12,1;CL:0000980,8.62e-12,1;CL:0002032,1.33e-11,161;CL:0000837,1.33e-11,161;CL:1001319,2.68e-11,1;CL:1000600,2.68e-11,1;CL:0000037,5.04e-11,168 | |||
|ontology_enrichment_development_v019=CL:0000051;3.35e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!5.78e-35!51;DOID:0060083!5.78e-35!51;DOID:162!6.07e-23!235;DOID:14566!3.95e-22!239;DOID:1240!5.96e-22!39;DOID:0050686!1.76e-18!137;DOID:0060058!9.82e-15!10;DOID:8692!3.71e-12!31 | |||
|ontology_enrichment_disease_v019=DOID:2355;1.12e-11;1!DOID:9119;2.81e-11;1!DOID:1240;2.41e-09;39!DOID:2531;6.09e-09;51!DOID:0060083;6.09e-09;51!DOID:8692;5.74e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,9.73e-15,51;DOID:0060083,9.73e-15,51;DOID:1240,7.30e-12,39;DOID:2355,1.18e-11,1;DOID:9119,3.28e-11,1;DOID:8692,6.31e-08,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;2.81e-11;1!UBERON:0001256;2.81e-11;1!UBERON:0001259;2.81e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,2.68e-11,1;UBERON:0001256,2.68e-11,1;UBERON:0001259,2.68e-11,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06978768047132,1.39571002064908,1.25937250101887,0,0,0,0,0,0,0.309868802321207,1.84820002233648,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0.743212700502875,1.44269212976445,0.0711418433484141,0.318852545457645,0.399158742865633,0,0,0,0,0,0.47003968731907,0,0.169291777801603,0,0,0.425846237690326,0.343505344755765,0,0,0,0.19538809540204,0,1.23087398947712,0,1.33228787199128,1.4098700508785,0,0,0,0.222886768554957,0.284136146806413,0,0,0,0,0,0,0.824019371133798,0,0,0,0,0,1.6001024709939,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.470940769185074,0.831058409500782,0,0,0,0.75901493089674,1.27149263184303,0,0.163232808159148,0,0,0,0,0,2.6686901581256,1.35920332841153,0.313265848516366,0,0,0,0.364909578431332,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.274083849293502,0.19871461170299,0,0,0,0,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0.209205692624666,0,0,0,0,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11683330164461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,4.4329961204643,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758245587708239,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0.168942440653073,0.512483037175893,0,0,0,0.389720617678777,0,1.63565394255844,0,0,0.422624246717254,0.59996218756479,0.106691729694141,0.688859918643263,0,0,0,0,0,0.107824811396682,1.10086159299127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0,0,0,0,0,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.79880526579098,0.171488009437418,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.218531143927391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,1.38385556638657,0.106727345877715,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p@chr1:93004036..93004045,+ | |||
}} |
Revision as of 07:13, 12 September 2013
Short description: | p@chr1:93004036..93004045, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:93004036..93004045, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.46e-26 | 24 |
pro-B cell | 8.46e-26 | 24 |
precursor B cell | 1.23e-14 | 3 |
lymphoid lineage restricted progenitor cell | 1.87e-14 | 52 |
lymphocyte | 3.69e-14 | 53 |
common lymphoid progenitor | 3.69e-14 | 53 |
hematopoietic cell | 9.09e-14 | 177 |
antibody secreting cell | 8.62e-12 | 1 |
plasma cell | 8.62e-12 | 1 |
plasmablast | 8.62e-12 | 1 |
hematopoietic oligopotent progenitor cell | 1.33e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.33e-11 | 161 |
bladder cell | 2.68e-11 | 1 |
lower urinary tract cell | 2.68e-11 | 1 |
hematopoietic stem cell | 5.04e-11 | 168 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 2.68e-11 | 1 |
wall of urinary bladder | 2.68e-11 | 1 |
mucosa of urinary bladder | 2.68e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.73e-15 | 51 |
immune system cancer | 9.73e-15 | 51 |
leukemia | 7.30e-12 | 39 |
anemia | 1.18e-11 | 1 |
acute myeloid leukemia | 3.28e-11 | 1 |
myeloid leukemia | 6.31e-08 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.