FFCP PHASE1:Hg19::chr21:47408990..47409018,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C198|description=CAGE_peak_at_chr21:47408990..47409018,+|id=chr21:47408990..47409018,+|ontology_enrichment_celltype=CL:0000055!8.95e-39!180;CL:0000057!1.40e-28!75;CL:0000183!2.94e-17!59;CL:0000680!2.31e-16!57;CL:0000056!2.31e-16!57;CL:0000355!2.31e-16!57;CL:0000187!2.33e-16!54;CL:0000393!2.26e-14!60;CL:0000211!2.26e-14!60;CL:0000192!6.22e-12!42;CL:0000514!6.22e-12!42;CL:0000048!1.20e-11!430;CL:0002620!8.90e-11!23;CL:0000723!9.90e-11!436;CL:0000034!3.93e-10!444;CL:0000359!8.84e-08!32|ontology_enrichment_celltype_v019=CL:0002620;6.25e-09;23!CL:0002559;7.08e-09;5!CL:0000057;1.40e-08;73!CL:0002320;3.02e-08;188!CL:0000723;3.02e-08;61!CL:0000134;2.61e-07;55!CL:0002570;3.37e-07;8!CL:0000048;5.36e-07;58|ontology_enrichment_celltype_v019_2=CL:0000057,2.47e-20,76;CL:0000048,2.95e-16,427;CL:0000723,1.26e-15,433;CL:0000034,8.13e-15,441;CL:0002320,1.06e-12,361;CL:0000134,1.83e-09,354;CL:0002559,7.72e-09,5;CL:0002620,8.04e-09,23;CL:0000187,1.34e-08,55;CL:0000680,1.36e-08,58;CL:0000056,1.36e-08,58;CL:0000355,1.36e-08,58;CL:0002570,2.92e-07,8;CL:0000219,3.06e-07,386;CL:0000393,3.66e-07,61;CL:0000211,3.66e-07,61|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;3.61e-07;5!DOID:450;3.61e-07;5!DOID:66;3.61e-07;5!DOID:423;3.61e-07;5!DOID:0080000;3.61e-07;5!DOID:11722;3.61e-07;5|ontology_enrichment_disease_v019_2=DOID:17,3.72e-07,5;DOID:450,3.72e-07,5;DOID:66,3.72e-07,5;DOID:423,3.72e-07,5;DOID:0080000,3.72e-07,5;DOID:11722,3.72e-07,5|ontology_enrichment_uberon=UBERON:0000914!1.69e-23!83;UBERON:0002329!1.69e-23!83;UBERON:0003077!1.69e-23!83;UBERON:0003059!1.69e-23!83;UBERON:0007282!1.69e-23!83;UBERON:0009618!1.69e-23!83;UBERON:0007285!1.69e-23!83;UBERON:0004290!6.72e-21!70;UBERON:0000486!1.46e-17!82;UBERON:0002385!8.34e-17!63;UBERON:0001015!8.34e-17!63;UBERON:0000383!8.34e-17!63;UBERON:0001134!3.19e-16!61;UBERON:0002036!3.19e-16!61;UBERON:0003082!3.19e-16!61;UBERON:0005256!4.58e-16!143;UBERON:0000475!5.40e-14!365;UBERON:0002199!1.13e-12!45;UBERON:0002416!1.13e-12!45;UBERON:0003102!2.00e-12!95;UBERON:0000481!3.79e-11!347;UBERON:0002100!6.71e-11!216;UBERON:0002097!1.44e-09!40;UBERON:0003104!6.81e-08!238;UBERON:0009142!6.81e-08!238;UBERON:0007100!3.81e-07!27;UBERON:0000948!7.02e-07!24;UBERON:0005498!7.02e-07!24;UBERON:0004140!7.02e-07!24;UBERON:0009881!7.02e-07!24;UBERON:0004141!7.02e-07!24;UBERON:0003084!7.02e-07!24;UBERON:0007005!7.02e-07!24;UBERON:0004139!7.02e-07!24;UBERON:0004291!7.02e-07!24|ontology_enrichment_uberon_v019=UBERON:0002199;1.40e-09;46!UBERON:0002416;1.40e-09;46!UBERON:0002073;7.08e-09;5!UBERON:0002072;9.73e-09;5!UBERON:0003102;1.03e-08;50!UBERON:0002384;1.66e-08;198!UBERON:0001013;2.85e-08;14!UBERON:0011135;6.64e-08;5!UBERON:0002216;6.64e-08;5!UBERON:0011134;6.64e-08;5!UBERON:0002209;6.64e-08;5!UBERON:0002213;6.64e-08;5!UBERON:0007844;6.64e-08;5!UBERON:0011138;6.64e-08;5!UBERON:0001130;6.64e-08;5!UBERON:0001066;6.64e-08;5!UBERON:0001468;6.64e-08;5!UBERON:0002067;1.33e-07;9!UBERON:0002097;1.70e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0002199,3.87e-14,46;UBERON:0002416,3.87e-14,46;UBERON:0007524,4.08e-14,73;UBERON:0002329,7.68e-14,71;UBERON:0003059,7.68e-14,71;UBERON:0007282,7.68e-14,71;UBERON:0004290,7.68e-14,71;UBERON:0009618,7.68e-14,71;UBERON:0003077,1.63e-13,72;UBERON:0007285,1.63e-13,72;UBERON:0002384,9.71e-13,371;UBERON:0003102,3.22e-12,99;UBERON:0007503,9.48e-12,78;UBERON:0000486,2.16e-11,83;UBERON:0003104,1.19e-10,160;UBERON:0009142,1.19e-10,160;UBERON:0005256,1.36e-10,122;UBERON:0002385,1.01e-09,64;UBERON:0001015,1.01e-09,64;UBERON:0000383,1.01e-09,64;UBERON:0002097,2.23e-09,41;UBERON:0001134,2.44e-09,62;UBERON:0002036,2.44e-09,62;UBERON:0003082,2.44e-09,62;UBERON:0002072,6.48e-09,5;UBERON:0002073,7.72e-09,5;UBERON:0005086,7.72e-09,5;UBERON:0001013,2.21e-08,14;UBERON:0011135,4.00e-08,5;UBERON:0002216,4.00e-08,5;UBERON:0011134,4.00e-08,5;UBERON:0002209,4.00e-08,5;UBERON:0002213,4.00e-08,5;UBERON:0005856,4.00e-08,5;UBERON:0005866,4.00e-08,5;UBERON:0005863,4.00e-08,5;UBERON:0007844,4.00e-08,5;UBERON:0011138,4.00e-08,5;UBERON:0001130,4.00e-08,5;UBERON:0001066,4.00e-08,5;UBERON:0001468,4.00e-08,5;UBERON:0002067,1.64e-07,9;UBERON:0004016,1.64e-07,9;UBERON:0010083,1.64e-07,9;UBERON:0004905,9.86e-07,8;UBERON:0000982,9.86e-07,8;UBERON:0004770,9.86e-07,8|phase1_expression=0.181678379270557,2.14100523890983,1.40954404095971,3.00219895059391,0.893922188854576,0.872338524100369,2.53299878168311,2.52687949370732,5.22371256399677,0,0,0,0,2.35156070624089,4.97096063591874,0.672325146451775,3.61616716814386,3.65155045193687,3.41552959153355,0.369363174230364,1.22400414746552,0.940364164434263,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_at_chr21:47408990..47409018,+ | |||
|id=chr21:47408990..47409018,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.95e-39!180;CL:0000057!1.40e-28!75;CL:0000183!2.94e-17!59;CL:0000680!2.31e-16!57;CL:0000056!2.31e-16!57;CL:0000355!2.31e-16!57;CL:0000187!2.33e-16!54;CL:0000393!2.26e-14!60;CL:0000211!2.26e-14!60;CL:0000192!6.22e-12!42;CL:0000514!6.22e-12!42;CL:0000048!1.20e-11!430;CL:0002620!8.90e-11!23;CL:0000723!9.90e-11!436;CL:0000034!3.93e-10!444;CL:0000359!8.84e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.25e-09;23!CL:0002559;7.08e-09;5!CL:0000057;1.40e-08;73!CL:0002320;3.02e-08;188!CL:0000723;3.02e-08;61!CL:0000134;2.61e-07;55!CL:0002570;3.37e-07;8!CL:0000048;5.36e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.47e-20,76;CL:0000048,2.95e-16,427;CL:0000723,1.26e-15,433;CL:0000034,8.13e-15,441;CL:0002320,1.06e-12,361;CL:0000134,1.83e-09,354;CL:0002559,7.72e-09,5;CL:0002620,8.04e-09,23;CL:0000187,1.34e-08,55;CL:0000680,1.36e-08,58;CL:0000056,1.36e-08,58;CL:0000355,1.36e-08,58;CL:0002570,2.92e-07,8;CL:0000219,3.06e-07,386;CL:0000393,3.66e-07,61;CL:0000211,3.66e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.61e-07;5!DOID:450;3.61e-07;5!DOID:66;3.61e-07;5!DOID:423;3.61e-07;5!DOID:0080000;3.61e-07;5!DOID:11722;3.61e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.72e-07,5;DOID:450,3.72e-07,5;DOID:66,3.72e-07,5;DOID:423,3.72e-07,5;DOID:0080000,3.72e-07,5;DOID:11722,3.72e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.69e-23!83;UBERON:0002329!1.69e-23!83;UBERON:0003077!1.69e-23!83;UBERON:0003059!1.69e-23!83;UBERON:0007282!1.69e-23!83;UBERON:0009618!1.69e-23!83;UBERON:0007285!1.69e-23!83;UBERON:0004290!6.72e-21!70;UBERON:0000486!1.46e-17!82;UBERON:0002385!8.34e-17!63;UBERON:0001015!8.34e-17!63;UBERON:0000383!8.34e-17!63;UBERON:0001134!3.19e-16!61;UBERON:0002036!3.19e-16!61;UBERON:0003082!3.19e-16!61;UBERON:0005256!4.58e-16!143;UBERON:0000475!5.40e-14!365;UBERON:0002199!1.13e-12!45;UBERON:0002416!1.13e-12!45;UBERON:0003102!2.00e-12!95;UBERON:0000481!3.79e-11!347;UBERON:0002100!6.71e-11!216;UBERON:0002097!1.44e-09!40;UBERON:0003104!6.81e-08!238;UBERON:0009142!6.81e-08!238;UBERON:0007100!3.81e-07!27;UBERON:0000948!7.02e-07!24;UBERON:0005498!7.02e-07!24;UBERON:0004140!7.02e-07!24;UBERON:0009881!7.02e-07!24;UBERON:0004141!7.02e-07!24;UBERON:0003084!7.02e-07!24;UBERON:0007005!7.02e-07!24;UBERON:0004139!7.02e-07!24;UBERON:0004291!7.02e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;1.40e-09;46!UBERON:0002416;1.40e-09;46!UBERON:0002073;7.08e-09;5!UBERON:0002072;9.73e-09;5!UBERON:0003102;1.03e-08;50!UBERON:0002384;1.66e-08;198!UBERON:0001013;2.85e-08;14!UBERON:0011135;6.64e-08;5!UBERON:0002216;6.64e-08;5!UBERON:0011134;6.64e-08;5!UBERON:0002209;6.64e-08;5!UBERON:0002213;6.64e-08;5!UBERON:0007844;6.64e-08;5!UBERON:0011138;6.64e-08;5!UBERON:0001130;6.64e-08;5!UBERON:0001066;6.64e-08;5!UBERON:0001468;6.64e-08;5!UBERON:0002067;1.33e-07;9!UBERON:0002097;1.70e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,3.87e-14,46;UBERON:0002416,3.87e-14,46;UBERON:0007524,4.08e-14,73;UBERON:0002329,7.68e-14,71;UBERON:0003059,7.68e-14,71;UBERON:0007282,7.68e-14,71;UBERON:0004290,7.68e-14,71;UBERON:0009618,7.68e-14,71;UBERON:0003077,1.63e-13,72;UBERON:0007285,1.63e-13,72;UBERON:0002384,9.71e-13,371;UBERON:0003102,3.22e-12,99;UBERON:0007503,9.48e-12,78;UBERON:0000486,2.16e-11,83;UBERON:0003104,1.19e-10,160;UBERON:0009142,1.19e-10,160;UBERON:0005256,1.36e-10,122;UBERON:0002385,1.01e-09,64;UBERON:0001015,1.01e-09,64;UBERON:0000383,1.01e-09,64;UBERON:0002097,2.23e-09,41;UBERON:0001134,2.44e-09,62;UBERON:0002036,2.44e-09,62;UBERON:0003082,2.44e-09,62;UBERON:0002072,6.48e-09,5;UBERON:0002073,7.72e-09,5;UBERON:0005086,7.72e-09,5;UBERON:0001013,2.21e-08,14;UBERON:0011135,4.00e-08,5;UBERON:0002216,4.00e-08,5;UBERON:0011134,4.00e-08,5;UBERON:0002209,4.00e-08,5;UBERON:0002213,4.00e-08,5;UBERON:0005856,4.00e-08,5;UBERON:0005866,4.00e-08,5;UBERON:0005863,4.00e-08,5;UBERON:0007844,4.00e-08,5;UBERON:0011138,4.00e-08,5;UBERON:0001130,4.00e-08,5;UBERON:0001066,4.00e-08,5;UBERON:0001468,4.00e-08,5;UBERON:0002067,1.64e-07,9;UBERON:0004016,1.64e-07,9;UBERON:0010083,1.64e-07,9;UBERON:0004905,9.86e-07,8;UBERON:0000982,9.86e-07,8;UBERON:0004770,9.86e-07,8 | |||
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| |||
|short_description=p@chr21:47408990..47409018,+ | |||
}} |
Revision as of 10:47, 12 September 2013
Short description: | p@chr21:47408990..47409018, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr21:47408990..47409018, + |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.47e-20 | 76 |
multi fate stem cell | 2.95e-16 | 427 |
somatic stem cell | 1.26e-15 | 433 |
stem cell | 8.13e-15 | 441 |
connective tissue cell | 1.06e-12 | 361 |
mesenchymal cell | 1.83e-09 | 354 |
hair follicle cell | 7.72e-09 | 5 |
skin fibroblast | 8.04e-09 | 23 |
muscle cell | 1.34e-08 | 55 |
muscle precursor cell | 1.36e-08 | 58 |
myoblast | 1.36e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.36e-08 | 58 |
mesenchymal stem cell of adipose | 2.92e-07 | 8 |
motile cell | 3.06e-07 | 386 |
electrically responsive cell | 3.66e-07 | 61 |
electrically active cell | 3.66e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.72e-07 | 5 |
myotonic disease | 3.72e-07 | 5 |
muscle tissue disease | 3.72e-07 | 5 |
myopathy | 3.72e-07 | 5 |
muscular disease | 3.72e-07 | 5 |
myotonic dystrophy | 3.72e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.