FFCP PHASE1:Hg19::chr2:10588641..10588646,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4953|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8109|TSSclassifier=S|UniProt=P11926|association_with_transcript=-11bp_to_ENST00000234111_5end|description=CAGE_peak_6_at_ODC1_5end|id=chr2:10588641..10588646,-|ontology_enrichment_celltype=CL:0000066!8.83e-08!254|ontology_enrichment_celltype_v019=CL:0000240;1.04e-11;6!CL:0000311;1.04e-11;6!CL:0000079;1.04e-11;6!CL:0000237;1.04e-11;6!CL:0000312;4.15e-10;5!CL:0002077;2.68e-09;34!CL:0002159;7.44e-08;14!CL:0000362;1.58e-07;9|ontology_enrichment_celltype_v019_2=CL:0000240,2.07e-11,6;CL:0000311,2.07e-11,6;CL:0000079,2.07e-11,6;CL:0000237,2.07e-11,6;CL:0000036,2.07e-11,6;CL:0000357,2.07e-11,6;CL:0000114,2.07e-11,6;CL:0000312,9.48e-10,5;CL:0002077,5.42e-09,34;CL:0000221,9.33e-09,72;CL:0002159,1.25e-07,14;CL:0000362,1.57e-07,9|ontology_enrichment_development_v019=CL:0000357;1.04e-11;6!CL:0000114;1.04e-11;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000924!5.87e-10!173;UBERON:0006601!5.87e-10!173;UBERON:0004121!7.28e-10!169|ontology_enrichment_uberon_v019=UBERON:0001003;3.12e-07;15!UBERON:0007376;3.12e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0001003,3.67e-07,15;UBERON:0007376,3.67e-07,15;UBERON:0007383,3.67e-07,15|phase1_expression=1.09007027562334,0.214100523890983,0.704772020479856,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0,0.655324116390517,1.31883489114227,0.123766352960047,0,0,0,1.46062018077475,0.487932798790507,0.492484232307152,0.408001382488506,0.940364164434263,1.43117993565528,0.821246550437305,0.502170558379211,0.305653622991805,0.410502947249729,0.550975469195755,0,0.383829398097213,0.619264493264304,0.919421224478927,2.10844143144775,0.369754010166788,0.46480320348181,0.142169232487422,0.587200878669695,0,0.601633342410425,0.217010870715852,0.447830948479849,0.32389366601898,0.515151135268373,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0.422510572623884,0.212604299965044,0.209658645508376,0.112328631146495,0.300353785683013,0.32145117339416,1.14005097496499,0.19891667719909,0,0,1.09227722252426,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0,0.411202997999018,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0,0,0.289803085735052,0.296573126324121,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.534880391567015,0.434473211648397,0,0,0.383587685530591,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0.850813354476611,1.10864698731282,1.31752178539689,0.589405839739707,1.09288586487763,1.11235332835329,0.324547393654683,0.174129737299267,0,0,1.71598473234038,1.11437250398869,0.596287222100115,0.860234595106124,0,0.56530794192401,0,0,0.417989933073621,0.516833518338658,0.35576626268671,0.66944122552934,0,0,0.732186172644509,0.735326160691737,0.81014194788176,0.535798369704479,0.673588117878509,0.450445921933289,0,0.949265659568129,0.549605231791222,0,0,0.872188104285069,0,0.12663051166458,0,0,0,1.68203280042692,0,0.24666754841716,0.311211035399766,0.404132016209064,0.163461903113459,0.756787138224657,0.576175924479999,0.937285727335186,0.312160076830321,0.570471821544449,0.149448680551801,0.469737994575059,0.809364721840658,0.842704840213491,0,0.368502951935304,0.103325781175765,0,0,0,0,0.168336113954066,0.500474079487857,0,0,0,0.150238058906597,0.567160915800105,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0.161646056818812,0,0.201504196455281,0.339121184620975,0.966304265816484,0.545492241181669,0.286804595389004,0.609868530647977,1.59035721985782,1.16193942869518,1.14027160516907,1.26160425437814,1.45990943630332,0,0,0,0,0,0.828147600278907,1.01150814046861,1.68707720918437,1.7647035637183,0.435758888184812,1.42362371466658,0.808987848960987,0.392442930250692,1.53898862778556,0,2.80483547606892,0,0,0,0,1.18157981336281,0,0.122988438543114,0.171567810298526,1.09750285408626,2.24803506515239,1.00528972411631,1.29623823221941,0.325808305310325,1.03993478527958,2.88662684050547,0.579652024875384,0.352226082707465,0.577465791044295,0.462985512576611,0.380508304469197,0.790204397959275,0.858486162094873,0.246217006087397,0.468008530278475,0.445893486866185,0,0.16798212819886,0.283550194484773,0.806026704325635,1.74380363108377,1.15014803749563,0.492663237895943,0.176096868026452,0,0.144119953416961,0,0.063497894292169,0,1.17217447210047,0,0.411309970813294,1.20137223137567,0,0.560655421726804,0,0.51336800074665,0.258543431515556,0,0,0.26593811658487,0,0.514414748524284,0,0.532844358032199,0,0.542621605391443,0,0.325736184293735,0,0,0.602878754119172,0,0,0,0.502257091432126,0,0.718874566474748,0,0,0,0.410952645100767,0.179060963239896,0.112085143993527,0,0.431255149719035,0,0.254094624222463,0,0.773288812777695,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4953 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8109 | |||
|TSSclassifier=S | |||
|UniProt=P11926 | |||
|association_with_transcript=-11bp_to_ENST00000234111_5end | |||
|description=CAGE_peak_6_at_ODC1_5end | |||
|id=chr2:10588641..10588646,- | |||
|ontology_enrichment_celltype=CL:0000066!8.83e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000240;1.04e-11;6!CL:0000311;1.04e-11;6!CL:0000079;1.04e-11;6!CL:0000237;1.04e-11;6!CL:0000312;4.15e-10;5!CL:0002077;2.68e-09;34!CL:0002159;7.44e-08;14!CL:0000362;1.58e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000240,2.07e-11,6;CL:0000311,2.07e-11,6;CL:0000079,2.07e-11,6;CL:0000237,2.07e-11,6;CL:0000036,2.07e-11,6;CL:0000357,2.07e-11,6;CL:0000114,2.07e-11,6;CL:0000312,9.48e-10,5;CL:0002077,5.42e-09,34;CL:0000221,9.33e-09,72;CL:0002159,1.25e-07,14;CL:0000362,1.57e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;1.04e-11;6!CL:0000114;1.04e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!5.87e-10!173;UBERON:0006601!5.87e-10!173;UBERON:0004121!7.28e-10!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;3.12e-07;15!UBERON:0007376;3.12e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,3.67e-07,15;UBERON:0007376,3.67e-07,15;UBERON:0007383,3.67e-07,15 | |||
|phase1_expression=1.09007027562334,0.214100523890983,0.704772020479856,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0,0.655324116390517,1.31883489114227,0.123766352960047,0,0,0,1.46062018077475,0.487932798790507,0.492484232307152,0.408001382488506,0.940364164434263,1.43117993565528,0.821246550437305,0.502170558379211,0.305653622991805,0.410502947249729,0.550975469195755,0,0.383829398097213,0.619264493264304,0.919421224478927,2.10844143144775,0.369754010166788,0.46480320348181,0.142169232487422,0.587200878669695,0,0.601633342410425,0.217010870715852,0.447830948479849,0.32389366601898,0.515151135268373,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0.422510572623884,0.212604299965044,0.209658645508376,0.112328631146495,0.300353785683013,0.32145117339416,1.14005097496499,0.19891667719909,0,0,1.09227722252426,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0,0.411202997999018,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0,0,0.289803085735052,0.296573126324121,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.534880391567015,0.434473211648397,0,0,0.383587685530591,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0.850813354476611,1.10864698731282,1.31752178539689,0.589405839739707,1.09288586487763,1.11235332835329,0.324547393654683,0.174129737299267,0,0,1.71598473234038,1.11437250398869,0.596287222100115,0.860234595106124,0,0.56530794192401,0,0,0.417989933073621,0.516833518338658,0.35576626268671,0.66944122552934,0,0,0.732186172644509,0.735326160691737,0.81014194788176,0.535798369704479,0.673588117878509,0.450445921933289,0,0.949265659568129,0.549605231791222,0,0,0.872188104285069,0,0.12663051166458,0,0,0,1.68203280042692,0,0.24666754841716,0.311211035399766,0.404132016209064,0.163461903113459,0.756787138224657,0.576175924479999,0.937285727335186,0.312160076830321,0.570471821544449,0.149448680551801,0.469737994575059,0.809364721840658,0.842704840213491,0,0.368502951935304,0.103325781175765,0,0,0,0,0.168336113954066,0.500474079487857,0,0,0,0.150238058906597,0.567160915800105,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0.161646056818812,0,0.201504196455281,0.339121184620975,0.966304265816484,0.545492241181669,0.286804595389004,0.609868530647977,1.59035721985782,1.16193942869518,1.14027160516907,1.26160425437814,1.45990943630332,0,0,0,0,0,0.828147600278907,1.01150814046861,1.68707720918437,1.7647035637183,0.435758888184812,1.42362371466658,0.808987848960987,0.392442930250692,1.53898862778556,0,2.80483547606892,0,0,0,0,1.18157981336281,0,0.122988438543114,0.171567810298526,1.09750285408626,2.24803506515239,1.00528972411631,1.29623823221941,0.325808305310325,1.03993478527958,2.88662684050547,0.579652024875384,0.352226082707465,0.577465791044295,0.462985512576611,0.380508304469197,0.790204397959275,0.858486162094873,0.246217006087397,0.468008530278475,0.445893486866185,0,0.16798212819886,0.283550194484773,0.806026704325635,1.74380363108377,1.15014803749563,0.492663237895943,0.176096868026452,0,0.144119953416961,0,0.063497894292169,0,1.17217447210047,0,0.411309970813294,1.20137223137567,0,0.560655421726804,0,0.51336800074665,0.258543431515556,0,0,0.26593811658487,0,0.514414748524284,0,0.532844358032199,0,0.542621605391443,0,0.325736184293735,0,0,0.602878754119172,0,0,0,0.502257091432126,0,0.718874566474748,0,0,0,0.410952645100767,0.179060963239896,0.112085143993527,0,0.431255149719035,0,0.254094624222463,0,0.773288812777695,1.17261385734044,0.637938751653163,0,0,0.414415513436035,0.24538298343828,0,0.542530047399471,0.415941723061614,0.178428988797162,0.157702415033935,0.468565659970853,0.300946099727719,0,1.03473071292505,0.664225598535437,0.368738337083406,0.260650843404249,0.391602314925481,0.343143423810856,0,0.215714200818617,0.213455115606889,0.909382714338778,0,0.907170879989041,0.496215615637554,0,0.561320188866147,0.768834895534206,0.511707249066704,0.321707842287215,1.48418066444991,0.308419387605311,0.710246901252508,0.164254312027618,0,0.464841513839837,0.241718899183244,0,0.736647911487171,0.114814448164607,0.182091168006717,0.262248829918848,0,0.231046011313244,1.56869953835371,0,0.527758144464379,0,0.340187410553031,0,0,0.812839312631559,1.00337954770971,0.764628819135115,1.66215201785745,0.223874754722178,0.219259876645935,0.522870902049801,0.256450125116389,0.328014645699706,0,0,0.366277859273374,0.330037999682352,0.574265537996172,1.95018073810956,0,0.096670718292122,1.07834031980251,0.767518373630648,0.551346289938122,0.107420244868274,0.145016693914229,1.36362603865761,0.267096106940212,0.165284915360978,0.384380134730212,0.382838137483752,0.6069466851333,0,0,0,0,0,0.869932992075073,0.37064843820784,0.429374660225974,0.744316738719335,0.632758849437452,0.190630193923825,0.511795582622668,0,0.318203247925937,0,0.5396173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| |||
|short_description=p6@ODC1 | |||
}} |
Revision as of 12:50, 12 September 2013
Short description: | p6@ODC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ODC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000234111_5end |
EntrezGene: | ODC1 |
HGNC: | 8109 |
UniProt: | P11926 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelial cell | 2.07e-11 | 6 |
keratin accumulating cell | 2.07e-11 | 6 |
stratified epithelial cell | 2.07e-11 | 6 |
keratinizing barrier epithelial cell | 2.07e-11 | 6 |
epithelial fate stem cell | 2.07e-11 | 6 |
stratified epithelial stem cell | 2.07e-11 | 6 |
surface ectodermal cell | 2.07e-11 | 6 |
keratinocyte | 9.48e-10 | 5 |
ecto-epithelial cell | 5.42e-09 | 34 |
ectodermal cell | 9.33e-09 | 72 |
general ecto-epithelial cell | 1.25e-07 | 14 |
epidermal cell | 1.57e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 3.67e-07 | 15 |
outer epithelium | 3.67e-07 | 15 |
enveloping layer of ectoderm | 3.67e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.