FFCP PHASE1:Hg19::chr2:201981663..201981675,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8837|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1876|TSSclassifier=S|UniProt=C9J4Q0|association_with_transcript=-86bp_to_ENST00000433445_5end|coexpression_cluster_id=C2|description=CAGE_peak_37_at_CFLAR_5end|id=chr2:201981663..201981675,+|ontology_enrichment_celltype=CL:0000738!4.05e-23!140;CL:0000037!1.36e-22!172;CL:0000566!1.36e-22!172;CL:0000860!1.64e-22!45;CL:0002057!3.74e-22!42;CL:0000766!7.19e-22!76;CL:0002032!1.14e-21!165;CL:0000837!1.14e-21!165;CL:0000988!1.35e-21!182;CL:0002087!1.15e-18!119;CL:0002031!2.13e-18!124;CL:0000763!3.51e-18!112;CL:0000049!3.51e-18!112;CL:0000839!2.24e-16!70;CL:0002194!2.46e-15!63;CL:0000576!2.46e-15!63;CL:0000040!2.46e-15!63;CL:0000559!2.46e-15!63;CL:0000557!5.98e-15!71;CL:0002009!1.65e-14!65;CL:0000134!1.35e-09!358;CL:0002320!2.91e-09!365;CL:0000094!1.32e-08!8;CL:0000048!3.36e-08!430;CL:0000723!1.07e-07!436;CL:0000034!4.63e-07!444;CL:0000219!7.37e-07!390|ontology_enrichment_celltype_v019=CL:0000094;2.29e-23;8!CL:0000775;3.88e-23;3!CL:0000081;5.90e-17;11!CL:0000771;4.12e-16;2!CL:0002393;1.86e-11;6!CL:0002397;1.86e-11;6!CL:0000766;5.89e-07;69|ontology_enrichment_celltype_v019_2=CL:0000094,2.09e-23,8;CL:0000775,3.36e-23,3;CL:0000081,5.54e-17,11;CL:0000771,4.13e-16,2;CL:0000766,2.48e-14,72;CL:0000738,7.09e-12,136;CL:0000860,1.01e-09,42;CL:0002057,1.01e-09,42;CL:0000037,5.21e-09,168;CL:0000763,8.41e-09,108;CL:0000049,8.41e-09,108;CL:0000988,2.17e-08,177;CL:0000473,2.28e-08,48;CL:0000234,2.28e-08,48;CL:0002032,2.72e-08,161;CL:0000837,2.72e-08,161;CL:0002393,1.03e-07,9;CL:0002397,1.03e-07,9|ontology_enrichment_development_v019=CL:0002057;1.25e-07;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.71e-21!102;UBERON:0003061!7.71e-21!102;UBERON:0002193!2.97e-19!112;UBERON:0002371!8.87e-13!80;UBERON:0000178!2.29e-11!15;UBERON:0000179!2.29e-11!15;UBERON:0000463!2.29e-11!15;UBERON:0001474!4.70e-11!86;UBERON:0002405!2.30e-10!115;UBERON:0003081!1.05e-09!216;UBERON:0002384!4.53e-09!375;UBERON:0004765!6.62e-09!101;UBERON:0001434!6.62e-09!101|ontology_enrichment_uberon_v019=UBERON:0000178;1.34e-29;15!UBERON:0000179;1.34e-29;15!UBERON:0000463;1.34e-29;15!UBERON:0002390;5.85e-13;32!UBERON:0002193;1.09e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.15e-29,15;UBERON:0000179,1.15e-29,15;UBERON:0000463,1.15e-29,15;UBERON:0002390,2.19e-15,98;UBERON:0003061,2.19e-15,98;UBERON:0002193,1.08e-13,108;UBERON:0003081,7.46e-07,203|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0.383829398097213,0.928896739896456,0,0,0,0,0,0.293600439334847,1.10799081706375,2.60707781711184,2.60413044859022,0,0,0,0,0,0.242584061187816,0,0.411167888021826,1.23882548358041,0,0,1.89185783910868,0.689491361473237,1.29096936716765,1.35426486594342,0.564727018627814,0,1.57306439111559,0.918251677112708,0.320929027076094,0,0.329851300186716,0.398927315243264,0.426224750532694,0.580418477257168,0.56738522469114,0.622822248995575,0.75374599577023,0,0.868755378820466,0,0.736555271975129,0.632924774881769,0,0.850417199860174,0.419317291016752,0.336985893439485,0.450530678524519,0.32145117339416,0.285012743741249,0.39783335439818,0,1.75996244461323,0,0.889509253863555,1.28019066769952,0.400395987036012,1.14950487990897,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0.167186495390678,0.32592226663359,0.473447805734733,0,0,0.294605907474837,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.0654895377488563,0,0,0.649094787309367,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7204751384914,19.3890132074163,0,0,0,0.397227542439656,0,0.354668382198357,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0,0,0.423863802319124,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0,0,0.10075209822764,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0.637938751653163,22.4702107184155,2.99161459204025,26.9370083733423,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,1.2942852049117,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0,0.451199612907412,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0,0,0.103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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8837 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1876 | |||
|TSSclassifier=S | |||
|UniProt=C9J4Q0 | |||
|association_with_transcript=-86bp_to_ENST00000433445_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_37_at_CFLAR_5end | |||
|id=chr2:201981663..201981675,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.05e-23!140;CL:0000037!1.36e-22!172;CL:0000566!1.36e-22!172;CL:0000860!1.64e-22!45;CL:0002057!3.74e-22!42;CL:0000766!7.19e-22!76;CL:0002032!1.14e-21!165;CL:0000837!1.14e-21!165;CL:0000988!1.35e-21!182;CL:0002087!1.15e-18!119;CL:0002031!2.13e-18!124;CL:0000763!3.51e-18!112;CL:0000049!3.51e-18!112;CL:0000839!2.24e-16!70;CL:0002194!2.46e-15!63;CL:0000576!2.46e-15!63;CL:0000040!2.46e-15!63;CL:0000559!2.46e-15!63;CL:0000557!5.98e-15!71;CL:0002009!1.65e-14!65;CL:0000134!1.35e-09!358;CL:0002320!2.91e-09!365;CL:0000094!1.32e-08!8;CL:0000048!3.36e-08!430;CL:0000723!1.07e-07!436;CL:0000034!4.63e-07!444;CL:0000219!7.37e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000094;2.29e-23;8!CL:0000775;3.88e-23;3!CL:0000081;5.90e-17;11!CL:0000771;4.12e-16;2!CL:0002393;1.86e-11;6!CL:0002397;1.86e-11;6!CL:0000766;5.89e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,2.09e-23,8;CL:0000775,3.36e-23,3;CL:0000081,5.54e-17,11;CL:0000771,4.13e-16,2;CL:0000766,2.48e-14,72;CL:0000738,7.09e-12,136;CL:0000860,1.01e-09,42;CL:0002057,1.01e-09,42;CL:0000037,5.21e-09,168;CL:0000763,8.41e-09,108;CL:0000049,8.41e-09,108;CL:0000988,2.17e-08,177;CL:0000473,2.28e-08,48;CL:0000234,2.28e-08,48;CL:0002032,2.72e-08,161;CL:0000837,2.72e-08,161;CL:0002393,1.03e-07,9;CL:0002397,1.03e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.71e-21!102;UBERON:0003061!7.71e-21!102;UBERON:0002193!2.97e-19!112;UBERON:0002371!8.87e-13!80;UBERON:0000178!2.29e-11!15;UBERON:0000179!2.29e-11!15;UBERON:0000463!2.29e-11!15;UBERON:0001474!4.70e-11!86;UBERON:0002405!2.30e-10!115;UBERON:0003081!1.05e-09!216;UBERON:0002384!4.53e-09!375;UBERON:0004765!6.62e-09!101;UBERON:0001434!6.62e-09!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.34e-29;15!UBERON:0000179;1.34e-29;15!UBERON:0000463;1.34e-29;15!UBERON:0002390;5.85e-13;32!UBERON:0002193;1.09e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.15e-29,15;UBERON:0000179,1.15e-29,15;UBERON:0000463,1.15e-29,15;UBERON:0002390,2.19e-15,98;UBERON:0003061,2.19e-15,98;UBERON:0002193,1.08e-13,108;UBERON:0003081,7.46e-07,203 | |||
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|short_description=p37@CFLAR | |||
}} |
Revision as of 15:59, 12 September 2013
Short description: | p37@CFLAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_37_at_CFLAR_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -86bp_to_ENST00000433445_5end |
EntrezGene: | CFLAR |
HGNC: | 1876 |
UniProt: | C9J4Q0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 2.09e-23 | 8 |
neutrophil | 3.36e-23 | 3 |
blood cell | 5.54e-17 | 11 |
eosinophil | 4.13e-16 | 2 |
myeloid leukocyte | 2.48e-14 | 72 |
leukocyte | 7.09e-12 | 136 |
classical monocyte | 1.01e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.01e-09 | 42 |
hematopoietic stem cell | 5.21e-09 | 168 |
myeloid cell | 8.41e-09 | 108 |
common myeloid progenitor | 8.41e-09 | 108 |
hematopoietic cell | 2.17e-08 | 177 |
defensive cell | 2.28e-08 | 48 |
phagocyte | 2.28e-08 | 48 |
hematopoietic oligopotent progenitor cell | 2.72e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.72e-08 | 161 |
intermediate monocyte | 1.03e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.03e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
blood | 1.15e-29 | 15 |
haemolymphatic fluid | 1.15e-29 | 15 |
organism substance | 1.15e-29 | 15 |
hematopoietic system | 2.19e-15 | 98 |
blood island | 2.19e-15 | 98 |
hemolymphoid system | 1.08e-13 | 108 |
lateral plate mesoderm | 7.46e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.