FFCP PHASE1:Hg19::chr2:20251800..20251815,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9741|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6924|TSSclassifier=S|UniProt=Q15012,Q6IBP4|association_with_transcript=-11bp_to_ENST00000175091,NM_014713,uc002rdm.2,uc002rdn.2,uc010yjx.1_5end|description=CAGE_peak_6_at_LAPTM4A_5end|id=chr2:20251800..20251815,-|ontology_enrichment_celltype=CL:0000860!9.38e-16!45;CL:0002057!3.04e-14!42;CL:0000557!3.58e-08!71;CL:0000839!6.59e-08!70;CL:0002009!1.57e-07!65;CL:0002194!2.06e-07!63;CL:0000576!2.06e-07!63;CL:0000040!2.06e-07!63;CL:0000559!2.06e-07!63|ontology_enrichment_celltype_v019=CL:0000860;2.67e-43;33!CL:0002057;2.67e-43;33!CL:0000473;1.20e-29;39!CL:0000234;1.20e-29;39!CL:0000576;1.48e-18;48!CL:0000766;5.42e-11;69|ontology_enrichment_celltype_v019_2=CL:0000860,2.17e-35,42;CL:0002057,2.17e-35,42;CL:0000473,7.69e-30,48;CL:0000234,7.69e-30,48;CL:0002194,4.08e-22,59;CL:0000576,4.08e-22,59;CL:0000040,4.08e-22,59;CL:0000559,4.08e-22,59;CL:0002009,4.00e-21,61;CL:0000839,2.19e-20,66;CL:0000557,5.89e-20,67;CL:0000766,5.41e-18,72;CL:0000763,2.28e-09,108;CL:0000049,2.28e-09,108;CL:0002031,1.66e-08,120;CL:0002087,1.81e-08,115|ontology_enrichment_development_v019=CL:0002057;7.75e-27;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!4.97e-08!115;UBERON:0000062!3.24e-07!511;UBERON:0001474!6.90e-07!86;UBERON:0002371!8.47e-07!80;UBERON:0000468!8.74e-07!659|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.55e-19,76;UBERON:0001474,1.31e-18,82;UBERON:0004765,3.75e-16,90;UBERON:0002405,2.80e-15,93;UBERON:0001434,1.19e-13,100;UBERON:0002390,4.87e-13,98;UBERON:0003061,4.87e-13,98;UBERON:0002193,6.01e-12,108;UBERON:0003081,9.25e-09,203;UBERON:0002204,9.31e-08,167|phase1_expression=1.2717486548939,0.428201047781966,0.281908808191942,0,0.446961094427288,1.74467704820074,0,1.26343974685366,0.522371256399677,0.491467873003018,0,0.873765488520689,1.58260186937072,0.247532705920093,0,0,1.80808358407193,0.730310090387373,0,0.123121058076788,1.02000345622126,0.313454721478088,0.286235987131057,0.547497700291537,0.376627918784408,0.534893840235659,0.410502947249729,0.236132343941038,0,0,0.154816123316076,0.919421224478927,0,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0.401088894940283,0.434021741431704,0,0,0.257575567634187,1.74477886535478,3.77875943688809,0.970336244751265,1.16214518452842,2.46700732813095,3.71647645074124,4.31538588483226,2.0492856522328,3.78371567821736,2.75796544589295,3.22742341791913,2.70852973188684,2.44715041405386,2.18324920046277,3.14612878223118,2.14258724659632,3.53021929783703,3.83602275479425,3.29851300186716,1.39624560335142,2.13112375266347,1.16083695451434,1.13477044938228,2.4912889959823,2.76373531782418,3.65038042894141,1.73751075764093,3.02699751316684,0.736555271975129,2.21523671208619,0.422510572623884,0.212604299965044,0.419317291016752,0.22465726229299,0.150176892841506,0.16072558669708,0,0.59675003159727,0.182664153764634,0,0.546138611262131,0,0,0,0.574752439954483,0,0.954053754535364,0,0,0,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0.473447805734733,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0.383220493601921,0.68725489096526,0,0.318565414324097,0,0,0,0,0,0,0,0,0.267440195783507,0,0,1.34140171940727,0.383587685530591,0.361439152384566,1.00267582127178,0.434539556882471,0,0.973269740605272,0.283604451492204,0.443458794925128,0.087834785693126,1.0478326039817,0.728590576585084,0,0,0.696518949197069,0.26591592103773,0.238490624305342,0,0,0.39752481473341,0.860234595106124,0.347140501607594,0,0.419499436209906,0,0.835979866147242,0.258416759169329,0.71153252537342,0.66944122552934,0.402829317109147,0,0.24406205754817,0.735326160691737,0,0.0892997282840798,0.44905874525234,0,0,0.949265659568129,0.366403487860815,0,0,0.872188104285069,0.496971951695318,0,0.397227542439656,2.0078563452417,0.709336764396714,0.560677600142307,0,0,0,0.269421344139376,0.326923806226917,0.302714855289863,0.576175924479999,0,0,0.570471821544449,0.149448680551801,0.23486899728753,0.323745888736263,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0.877955241761676,0,0.300476117813194,0.226864366320042,0.358779271377724,0,0.847727604638247,0.600182192168805,0.618315175430633,0.772921620136887,0.18611685633159,0.506328996723799,0.0974370051611986,0,0.644349290496095,0.484938170456436,0.710019185033229,0.201504196455281,0.67824236924195,0.57978255948989,0.272746120590835,0.286804595389004,0.121973706129595,0.662648841607426,0.348581828608555,0.414644220061482,0.504641701751257,0.36497735907583,0,0,0,0.464367928031979,0,0.473227200159376,1.01150814046861,0.482022059766964,1.10293972732394,0.653638332277218,0.237270619111097,0.539325232640658,0.196221465125346,0.38474715694639,0.738155454624648,1.40241773803446,0,1.4700871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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9741 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6924 | |||
|TSSclassifier=S | |||
|UniProt=Q15012,Q6IBP4 | |||
|association_with_transcript=-11bp_to_ENST00000175091,NM_014713,uc002rdm.2,uc002rdn.2,uc010yjx.1_5end | |||
|description=CAGE_peak_6_at_LAPTM4A_5end | |||
|id=chr2:20251800..20251815,- | |||
|ontology_enrichment_celltype=CL:0000860!9.38e-16!45;CL:0002057!3.04e-14!42;CL:0000557!3.58e-08!71;CL:0000839!6.59e-08!70;CL:0002009!1.57e-07!65;CL:0002194!2.06e-07!63;CL:0000576!2.06e-07!63;CL:0000040!2.06e-07!63;CL:0000559!2.06e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.67e-43;33!CL:0002057;2.67e-43;33!CL:0000473;1.20e-29;39!CL:0000234;1.20e-29;39!CL:0000576;1.48e-18;48!CL:0000766;5.42e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.17e-35,42;CL:0002057,2.17e-35,42;CL:0000473,7.69e-30,48;CL:0000234,7.69e-30,48;CL:0002194,4.08e-22,59;CL:0000576,4.08e-22,59;CL:0000040,4.08e-22,59;CL:0000559,4.08e-22,59;CL:0002009,4.00e-21,61;CL:0000839,2.19e-20,66;CL:0000557,5.89e-20,67;CL:0000766,5.41e-18,72;CL:0000763,2.28e-09,108;CL:0000049,2.28e-09,108;CL:0002031,1.66e-08,120;CL:0002087,1.81e-08,115 | |||
|ontology_enrichment_development_v019=CL:0002057;7.75e-27;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.97e-08!115;UBERON:0000062!3.24e-07!511;UBERON:0001474!6.90e-07!86;UBERON:0002371!8.47e-07!80;UBERON:0000468!8.74e-07!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.55e-19,76;UBERON:0001474,1.31e-18,82;UBERON:0004765,3.75e-16,90;UBERON:0002405,2.80e-15,93;UBERON:0001434,1.19e-13,100;UBERON:0002390,4.87e-13,98;UBERON:0003061,4.87e-13,98;UBERON:0002193,6.01e-12,108;UBERON:0003081,9.25e-09,203;UBERON:0002204,9.31e-08,167 | |||
|phase1_expression=1.2717486548939,0.428201047781966,0.281908808191942,0,0.446961094427288,1.74467704820074,0,1.26343974685366,0.522371256399677,0.491467873003018,0,0.873765488520689,1.58260186937072,0.247532705920093,0,0,1.80808358407193,0.730310090387373,0,0.123121058076788,1.02000345622126,0.313454721478088,0.286235987131057,0.547497700291537,0.376627918784408,0.534893840235659,0.410502947249729,0.236132343941038,0,0,0.154816123316076,0.919421224478927,0,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0.401088894940283,0.434021741431704,0,0,0.257575567634187,1.74477886535478,3.77875943688809,0.970336244751265,1.16214518452842,2.46700732813095,3.71647645074124,4.31538588483226,2.0492856522328,3.78371567821736,2.75796544589295,3.22742341791913,2.70852973188684,2.44715041405386,2.18324920046277,3.14612878223118,2.14258724659632,3.53021929783703,3.83602275479425,3.29851300186716,1.39624560335142,2.13112375266347,1.16083695451434,1.13477044938228,2.4912889959823,2.76373531782418,3.65038042894141,1.73751075764093,3.02699751316684,0.736555271975129,2.21523671208619,0.422510572623884,0.212604299965044,0.419317291016752,0.22465726229299,0.150176892841506,0.16072558669708,0,0.59675003159727,0.182664153764634,0,0.546138611262131,0,0,0,0.574752439954483,0,0.954053754535364,0,0,0,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0.473447805734733,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0.383220493601921,0.68725489096526,0,0.318565414324097,0,0,0,0,0,0,0,0,0.267440195783507,0,0,1.34140171940727,0.383587685530591,0.361439152384566,1.00267582127178,0.434539556882471,0,0.973269740605272,0.283604451492204,0.443458794925128,0.087834785693126,1.0478326039817,0.728590576585084,0,0,0.696518949197069,0.26591592103773,0.238490624305342,0,0,0.39752481473341,0.860234595106124,0.347140501607594,0,0.419499436209906,0,0.835979866147242,0.258416759169329,0.71153252537342,0.66944122552934,0.402829317109147,0,0.24406205754817,0.735326160691737,0,0.0892997282840798,0.44905874525234,0,0,0.949265659568129,0.366403487860815,0,0,0.872188104285069,0.496971951695318,0,0.397227542439656,2.0078563452417,0.709336764396714,0.560677600142307,0,0,0,0.269421344139376,0.326923806226917,0.302714855289863,0.576175924479999,0,0,0.570471821544449,0.149448680551801,0.23486899728753,0.323745888736263,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0.877955241761676,0,0.300476117813194,0.226864366320042,0.358779271377724,0,0.847727604638247,0.600182192168805,0.618315175430633,0.772921620136887,0.18611685633159,0.506328996723799,0.0974370051611986,0,0.644349290496095,0.484938170456436,0.710019185033229,0.201504196455281,0.67824236924195,0.57978255948989,0.272746120590835,0.286804595389004,0.121973706129595,0.662648841607426,0.348581828608555,0.414644220061482,0.504641701751257,0.36497735907583,0,0,0,0.464367928031979,0,0.473227200159376,1.01150814046861,0.482022059766964,1.10293972732394,0.653638332277218,0.237270619111097,0.539325232640658,0.196221465125346,0.38474715694639,0.738155454624648,1.40241773803446,0,1.47008711385542,0,0.982827216677626,0.590789906681404,0,0.368965315629341,0.171567810298526,0.219500570817251,0,0.100528972411631,0.0925884451585296,0.325808305310325,1.03993478527958,0,0.115930404975077,0.117408694235822,1.15493158208859,0.925971025153221,0.380508304469197,2.37061319387782,0.858486162094873,0.492434012174795,0,0,0,0.503946384596579,0.141775097242386,0.716468181622786,0.581267877027924,0,0.985326475791887,0.44024217006613,0.414656231081544,1.15295962733569,0.88369703398466,0.126995788584338,0.381988425558278,0,0,0.205654985406647,0.600686115687835,0,0.224262168690721,0.87192013766656,0.1466765716419,0.517086863031111,0,0,0.26593811658487,0,0,1.41849132023278,0,0.57191197463259,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,1.4377491329495,2.29723871668228,0,0.434343920002738,0.61642896765115,0.358121926479791,0.560425719967636,0.197030760201927,0.646882724578552,0.128343036279748,0.76228387266739,0,0,0,1.27587750330633,0,0,0,0.24538298343828,0.500170521059677,0,0.623912584592421,0.356857977594324,0.315404830067869,0.468565659970853,0.300946099727719,2.27407504055985,1.03473071292505,0,0.184369168541703,0.260650843404249,1.37060810223918,0.343143423810856,0,0.647142602455851,0.106727557803444,0.303127571446259,0,0.907170879989041,1.24053903909388,0,0.280660094433074,0.640695746278505,0.511707249066704,0.804269605718038,1.48418066444991,0.154209693802656,0,0.328508624055237,1.03850885836724,0.232420756919918,1.32945394550784,0.40101294060657,0.460404944679482,0.574072240823034,0.364182336013434,0.524497659837696,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0.254876273045038,1.66215201785745,0.447749509444357,0.219259876645935,0,0,0,1.95227036798582,0.412164046590889,0.457847324091717,0.4125474996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| |||
|short_description=p6@LAPTM4A | |||
}} |
Revision as of 16:03, 12 September 2013
Short description: | p6@LAPTM4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_LAPTM4A_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000175091, NM_014713, uc002rdm.2, uc002rdn.2, uc010yjx.1_5end |
EntrezGene: | LAPTM4A |
HGNC: | 6924 |
UniProt: | Q15012Q6IBP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.17e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.17e-35 | 42 |
defensive cell | 7.69e-30 | 48 |
phagocyte | 7.69e-30 | 48 |
monopoietic cell | 4.08e-22 | 59 |
monocyte | 4.08e-22 | 59 |
monoblast | 4.08e-22 | 59 |
promonocyte | 4.08e-22 | 59 |
macrophage dendritic cell progenitor | 4.00e-21 | 61 |
myeloid lineage restricted progenitor cell | 2.19e-20 | 66 |
granulocyte monocyte progenitor cell | 5.89e-20 | 67 |
myeloid leukocyte | 5.41e-18 | 72 |
myeloid cell | 2.28e-09 | 108 |
common myeloid progenitor | 2.28e-09 | 108 |
hematopoietic lineage restricted progenitor cell | 1.66e-08 | 120 |
nongranular leukocyte | 1.81e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.55e-19 | 76 |
bone element | 1.31e-18 | 82 |
skeletal element | 3.75e-16 | 90 |
immune system | 2.80e-15 | 93 |
skeletal system | 1.19e-13 | 100 |
hematopoietic system | 4.87e-13 | 98 |
blood island | 4.87e-13 | 98 |
hemolymphoid system | 6.01e-12 | 108 |
lateral plate mesoderm | 9.25e-09 | 203 |
musculoskeletal system | 9.31e-08 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.