FFCP PHASE1:Hg19::chr2:218843623..218843635,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7145|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11973|TSSclassifier=S|UniProt=C9JI43|association_with_transcript=21bp_to_ENST00000413280_5end|coexpression_cluster_id=C1040|description=CAGE_peak_11_at_TNS1_5end|id=chr2:218843623..218843635,-|ontology_enrichment_celltype=CL:0002139!1.71e-12!24;CL:0000071!6.51e-10!18;CL:0002546!6.51e-10!18;CL:0002078!1.36e-08!44;CL:0000115!1.50e-08!35;CL:1000413!2.77e-07!9|ontology_enrichment_celltype_v019=CL:0000071;5.79e-17;18!CL:0002139;8.37e-15;24!CL:0002618;8.74e-11;3!CL:1000413;2.78e-09;9!CL:0002543;3.71e-09;6!CL:0000115;2.17e-08;36|ontology_enrichment_celltype_v019_2=CL:0000071,7.65e-17,18;CL:0002546,7.65e-17,18;CL:0002139,1.28e-14,24;CL:0002618,1.67e-10,3;CL:1000413,2.46e-09,9;CL:0000115,5.31e-09,36;CL:0002543,6.85e-09,6;CL:0002078,4.18e-08,45|ontology_enrichment_development_v019=CL:0002546;5.79e-17;18!UBERON:0006603;1.03e-09;65!UBERON:0005062;2.51e-08;4!UBERON:0007284;2.51e-08;4!UBERON:0004872;3.84e-08;7!UBERON:0006965;7.37e-08;2!UBERON:0007297;1.62e-07;2!UBERON:0003104;1.85e-07;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;8.23e-09;2|ontology_enrichment_disease_v019_2=DOID:114,8.26e-09,2|ontology_enrichment_uberon=UBERON:0007023!2.35e-35!115;UBERON:0000477!9.23e-19!286;UBERON:0004111!5.13e-17!241;UBERON:0000025!4.43e-15!194;UBERON:0000483!4.06e-13!309;UBERON:0000119!1.09e-12!312;UBERON:0003075!1.44e-10!86;UBERON:0007284!1.44e-10!86;UBERON:0002616!2.70e-10!59;UBERON:0001049!3.41e-10!57;UBERON:0005068!3.41e-10!57;UBERON:0006241!3.41e-10!57;UBERON:0007135!3.41e-10!57;UBERON:0001986!6.51e-10!18;UBERON:0004638!6.51e-10!18;UBERON:0004852!6.51e-10!18;UBERON:0000481!1.30e-09!347;UBERON:0002346!1.54e-09!90;UBERON:0000468!1.28e-08!659;UBERON:0003080!2.05e-08!42;UBERON:0000487!2.86e-08!22;UBERON:0005743!4.33e-08!86;UBERON:0006914!6.63e-08!25;UBERON:0003103!6.71e-08!69;UBERON:0002780!7.28e-08!41;UBERON:0001890!7.28e-08!41;UBERON:0006240!7.28e-08!41;UBERON:0000955!9.95e-08!69;UBERON:0006238!9.95e-08!69;UBERON:0003056!1.37e-07!61;UBERON:0001017!1.41e-07!82;UBERON:0003914!1.74e-07!118;UBERON:0003915!2.77e-07!9;UBERON:0004700!2.77e-07!9;UBERON:0001917!2.77e-07!9;UBERON:0000922!3.38e-07!612;UBERON:0000467!3.66e-07!625;UBERON:0000480!4.41e-07!626;UBERON:0001893!8.44e-07!34|ontology_enrichment_uberon_v019=UBERON:0004638;5.79e-17;18!UBERON:0001986;5.79e-17;18!UBERON:0004852;5.79e-17;18!UBERON:0006914;4.05e-14;25!UBERON:0000487;1.63e-13;22!UBERON:0003978;5.80e-11;3!UBERON:0000946;5.80e-11;3!UBERON:0004151;8.74e-11;3!UBERON:0006947;1.90e-10;3!UBERON:0004054;1.90e-10;3!UBERON:0007100;5.52e-10;25!UBERON:0003915;2.78e-09;9!UBERON:0004700;2.78e-09;9!UBERON:0001917;2.78e-09;9!UBERON:0001638;4.21e-09;9!UBERON:0003920;4.21e-09;9!UBERON:0004582;4.21e-09;9!UBERON:0005904;6.03e-08;4!UBERON:0002081;1.62e-07;2!UBERON:0002133;1.62e-07;2!UBERON:0000490;1.74e-07;33!UBERON:0004175;2.99e-07;21|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.05e-17,114;UBERON:0004638,7.65e-17,18;UBERON:0001986,7.65e-17,18;UBERON:0004852,7.65e-17,18;UBERON:0006914,5.60e-14,25;UBERON:0000487,2.03e-13,22;UBERON:0003978,4.74e-11,3;UBERON:0009751,4.74e-11,3;UBERON:0000946,4.74e-11,3;UBERON:0002523,4.74e-11,3;UBERON:0005983,4.74e-11,3;UBERON:0002165,4.74e-11,3;UBERON:0002062,4.74e-11,3;UBERON:0007280,4.74e-11,3;UBERON:0004151,6.92e-11,3;UBERON:0003914,8.16e-11,117;UBERON:0006947,3.48e-10,3;UBERON:0004054,3.48e-10,3;UBERON:0004872,3.96e-10,83;UBERON:0007500,1.94e-09,59;UBERON:0001981,1.94e-09,59;UBERON:0004537,1.94e-09,59;UBERON:0006965,1.94e-09,59;UBERON:0001009,2.09e-09,112;UBERON:0003103,2.45e-09,68;UBERON:0003915,2.46e-09,9;UBERON:0004700,2.46e-09,9;UBERON:0001917,2.46e-09,9;UBERON:0007100,3.59e-09,27;UBERON:0000055,6.49e-09,68;UBERON:0001638,7.60e-09,9;UBERON:0003920,7.60e-09,9;UBERON:0004582,7.60e-09,9;UBERON:0005904,9.42e-08,4;UBERON:0002081,1.37e-07,2;UBERON:0010227,1.37e-07,2;UBERON:0002133,1.42e-07,2;UBERON:0002049,2.50e-07,78;UBERON:0007798,2.50e-07,78;UBERON:0004111,8.80e-07,240|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0.136874425072884,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0.221729397462564,0.43917392846563,1.70272798147026,0,0,0,0,0,0,0,0,2.38514888840046,0,1.73570250803797,0.56530794192401,1.25849830862972,0.275118041940067,1.46296476575767,0.258416759169329,0.71153252537342,0,0.805658634218294,0,2.92874469057803,0.735326160691737,2.43042584364528,1.16089646769304,2.46982309888787,1.0135033243499,0,0,1.09921046358244,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7145 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11973 | |||
|TSSclassifier=S | |||
|UniProt=C9JI43 | |||
|association_with_transcript=21bp_to_ENST00000413280_5end | |||
|coexpression_cluster_id=C1040 | |||
|description=CAGE_peak_11_at_TNS1_5end | |||
|id=chr2:218843623..218843635,- | |||
|ontology_enrichment_celltype=CL:0002139!1.71e-12!24;CL:0000071!6.51e-10!18;CL:0002546!6.51e-10!18;CL:0002078!1.36e-08!44;CL:0000115!1.50e-08!35;CL:1000413!2.77e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000071;5.79e-17;18!CL:0002139;8.37e-15;24!CL:0002618;8.74e-11;3!CL:1000413;2.78e-09;9!CL:0002543;3.71e-09;6!CL:0000115;2.17e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,7.65e-17,18;CL:0002546,7.65e-17,18;CL:0002139,1.28e-14,24;CL:0002618,1.67e-10,3;CL:1000413,2.46e-09,9;CL:0000115,5.31e-09,36;CL:0002543,6.85e-09,6;CL:0002078,4.18e-08,45 | |||
|ontology_enrichment_development_v019=CL:0002546;5.79e-17;18!UBERON:0006603;1.03e-09;65!UBERON:0005062;2.51e-08;4!UBERON:0007284;2.51e-08;4!UBERON:0004872;3.84e-08;7!UBERON:0006965;7.37e-08;2!UBERON:0007297;1.62e-07;2!UBERON:0003104;1.85e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;8.23e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.26e-09,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;5.79e-17;18!UBERON:0001986;5.79e-17;18!UBERON:0004852;5.79e-17;18!UBERON:0006914;4.05e-14;25!UBERON:0000487;1.63e-13;22!UBERON:0003978;5.80e-11;3!UBERON:0000946;5.80e-11;3!UBERON:0004151;8.74e-11;3!UBERON:0006947;1.90e-10;3!UBERON:0004054;1.90e-10;3!UBERON:0007100;5.52e-10;25!UBERON:0003915;2.78e-09;9!UBERON:0004700;2.78e-09;9!UBERON:0001917;2.78e-09;9!UBERON:0001638;4.21e-09;9!UBERON:0003920;4.21e-09;9!UBERON:0004582;4.21e-09;9!UBERON:0005904;6.03e-08;4!UBERON:0002081;1.62e-07;2!UBERON:0002133;1.62e-07;2!UBERON:0000490;1.74e-07;33!UBERON:0004175;2.99e-07;21 | |||
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| |||
|short_description=p11@TNS1 | |||
}} |
Revision as of 16:47, 12 September 2013
Short description: | p11@TNS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_TNS1_5end |
Coexpression cluster: | C1040_smooth_aorta_heart_bladder_uterus_penis_cervix |
Association with transcript: | 21bp_to_ENST00000413280_5end |
EntrezGene: | TNS1 |
HGNC: | 11973 |
UniProt: | C9JI43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 7.65e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.65e-17 | 18 |
endothelial cell of vascular tree | 1.28e-14 | 24 |
endothelial cell of umbilical vein | 1.67e-10 | 3 |
endothelial cell of artery | 2.46e-09 | 9 |
endothelial cell | 5.31e-09 | 36 |
vein endothelial cell | 6.85e-09 | 6 |
meso-epithelial cell | 4.18e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.26e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.